Protein–RNA interactions for Protein: P62701

RPS4X, 40S ribosomal protein S4, X isoform, humanhuman

Known RBP Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4XP62701 OFD1P3Y-201ENST00000453312 783 ntBASIC3.26□□□□□ -1.89
RPS4XP62701 RPL21P134-201ENST00000453468 483 ntBASIC3.26□□□□□ -1.89
RPS4XP62701 ANP32BP2-201ENST00000454525 545 ntBASIC3.26□□□□□ -1.89
RPS4XP62701 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC3.26□□□□□ -1.89
RPS4XP62701 AC084357.1-201ENST00000473404 255 ntBASIC3.26□□□□□ -1.89
RPS4XP62701 AC092451.1-201ENST00000480211 153 ntBASIC3.26□□□□□ -1.89
RPS4XP62701 AC090453.1-201ENST00000495560 436 ntBASIC3.26□□□□□ -1.89
RPS4XP62701 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC3.26□□□□□ -1.89
RPS4XP62701 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC3.26□□□□□ -1.89
RPS4XP62701 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC3.26□□□□□ -1.89
RPS4XP62701 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
RPS4XP62701 AC104619.4-201ENST00000510773 249 ntBASIC3.26□□□□□ -1.89
RPS4XP62701 AC109445.1-201ENST00000512356 383 ntBASIC3.26□□□□□ -1.89
RPS4XP62701 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC3.26□□□□□ -1.89
RPS4XP62701 IGKV2-23-201ENST00000518729 323 ntBASIC3.26□□□□□ -1.89
RPS4XP62701 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC3.26□□□□□ -1.89
RPS4XP62701 RANP9-201ENST00000519957 271 ntBASIC3.26□□□□□ -1.89
RPS4XP62701 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC3.26□□□□□ -1.89
RPS4XP62701 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC3.26□□□□□ -1.89
RPS4XP62701 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
RPS4XP62701 CCNG2P1-201ENST00000549521 1000 ntBASIC3.26□□□□□ -1.89
RPS4XP62701 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.26□□□□□ -1.89
RPS4XP62701 GTF2IP22-201ENST00000554443 182 ntBASIC3.26□□□□□ -1.89
RPS4XP62701 AC009101.1-201ENST00000568135 242 ntBASIC3.26□□□□□ -1.89
RPS4XP62701 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC3.26□□□□□ -1.89
RPS4XP62701 MIR4644-201ENST00000579929 84 ntBASIC3.26□□□□□ -1.89
RPS4XP62701 MIR3690-201ENST00000580266 75 ntBASIC3.26□□□□□ -1.89
RPS4XP62701 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC3.26□□□□□ -1.89
RPS4XP62701 XIAPP1-201ENST00000603162 600 ntBASIC3.26□□□□□ -1.89
RPS4XP62701 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC3.26□□□□□ -1.89
RPS4XP62701 AC007179.3-201ENST00000604976 235 ntBASIC3.26□□□□□ -1.89
RPS4XP62701 RNVU1-4-201ENST00000612985 164 ntBASIC3.26□□□□□ -1.89
RPS4XP62701 MESTIT1_2.1-201ENST00000616328 235 ntBASIC3.26□□□□□ -1.89
RPS4XP62701 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
RPS4XP62701 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
RPS4XP62701 IL23R-202ENST00000395227 1459 ntTSL 3 BASIC3.26□□□□□ -1.89
RPS4XP62701 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.26□□□□□ -1.89
RPS4XP62701 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
RPS4XP62701 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC3.26□□□□□ -1.89
RPS4XP62701 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
RPS4XP62701 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
RPS4XP62701 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.26□□□□□ -1.89
RPS4XP62701 GABPAP-201ENST00000419271 1356 ntBASIC3.25□□□□□ -1.89
RPS4XP62701 AL049780.3-201ENST00000624612 1583 ntBASIC3.25□□□□□ -1.89
RPS4XP62701 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.25□□□□□ -1.89
RPS4XP62701 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC3.25□□□□□ -1.89
RPS4XP62701 AC058791.1-201ENST00000608412 3198 ntBASIC3.25□□□□□ -1.89
RPS4XP62701 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
RPS4XP62701 MTCO1P12-201ENST00000414273 1543 ntBASIC3.25□□□□□ -1.89
RPS4XP62701 AC004925.1-201ENST00000624256 2706 ntBASIC3.25□□□□□ -1.89
RPS4XP62701 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.25□□□□□ -1.89
RPS4XP62701 AL390862.1-201ENST00000635467 1469 ntBASIC3.25□□□□□ -1.89
RPS4XP62701 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
RPS4XP62701 CUBN-201ENST00000377823 705 ntTSL 3 BASIC3.25□□□□□ -1.89
RPS4XP62701 RNU6-1181P-201ENST00000384191 106 ntBASIC3.25□□□□□ -1.89
RPS4XP62701 SNORD3H-201ENST00000384486 214 ntBASIC3.25□□□□□ -1.89
RPS4XP62701 MIR218-2-201ENST00000385006 110 ntBASIC3.25□□□□□ -1.89
RPS4XP62701 MIR483-201ENST00000385070 76 ntBASIC3.25□□□□□ -1.89
RPS4XP62701 RPL7P60-201ENST00000397636 735 ntBASIC3.25□□□□□ -1.89
RPS4XP62701 HMGB1P17-201ENST00000403495 628 ntBASIC3.25□□□□□ -1.89
RPS4XP62701 RNU6-712P-201ENST00000410558 100 ntBASIC3.25□□□□□ -1.89
RPS4XP62701 RNU2-15P-201ENST00000410692 191 ntBASIC3.25□□□□□ -1.89
RPS4XP62701 SSR1P2-201ENST00000415208 787 ntBASIC3.25□□□□□ -1.89
RPS4XP62701 AC127526.1-201ENST00000417526 366 ntBASIC3.25□□□□□ -1.89
RPS4XP62701 AC068533.1-201ENST00000418542 415 ntBASIC3.25□□□□□ -1.89
RPS4XP62701 ELOCP9-201ENST00000418624 239 ntBASIC3.25□□□□□ -1.89
RPS4XP62701 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC3.25□□□□□ -1.89
RPS4XP62701 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC3.25□□□□□ -1.89
RPS4XP62701 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC3.25□□□□□ -1.89
RPS4XP62701 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC3.25□□□□□ -1.89
RPS4XP62701 ATP5F1P1-201ENST00000433775 569 ntBASIC3.25□□□□□ -1.89
RPS4XP62701 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC3.25□□□□□ -1.89
RPS4XP62701 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
RPS4XP62701 MTND4P6-201ENST00000438297 472 ntBASIC3.25□□□□□ -1.89
RPS4XP62701 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC3.25□□□□□ -1.89
RPS4XP62701 PTENP1-201ENST00000447117 1215 ntBASIC3.25□□□□□ -1.89
RPS4XP62701 AC104978.1-201ENST00000449387 391 ntBASIC3.25□□□□□ -1.89
RPS4XP62701 RPL12P26-201ENST00000452430 487 ntBASIC3.25□□□□□ -1.89
RPS4XP62701 SUN3-208ENST00000453192 801 ntTSL 5 BASIC3.25□□□□□ -1.89
RPS4XP62701 SUMO2P2-201ENST00000456482 255 ntBASIC3.25□□□□□ -1.89
RPS4XP62701 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC3.25□□□□□ -1.89
RPS4XP62701 MTCO3P35-201ENST00000485582 781 ntBASIC3.25□□□□□ -1.89
RPS4XP62701 SETP14-201ENST00000497538 873 ntBASIC3.25□□□□□ -1.89
RPS4XP62701 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC3.25□□□□□ -1.89
RPS4XP62701 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC3.25□□□□□ -1.89
RPS4XP62701 AC010625.1-201ENST00000511296 403 ntBASIC3.25□□□□□ -1.89
RPS4XP62701 SNORA31.20-201ENST00000517111 133 ntBASIC3.25□□□□□ -1.89
RPS4XP62701 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC3.25□□□□□ -1.89
RPS4XP62701 AP001372.4-201ENST00000524889 472 ntBASIC3.25□□□□□ -1.89
RPS4XP62701 OR4P1P-201ENST00000530808 1136 ntBASIC3.25□□□□□ -1.89
RPS4XP62701 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC3.25□□□□□ -1.89
RPS4XP62701 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.25□□□□□ -1.89
RPS4XP62701 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC3.25□□□□□ -1.89
RPS4XP62701 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC3.25□□□□□ -1.89
RPS4XP62701 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC3.25□□□□□ -1.89
RPS4XP62701 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC3.25□□□□□ -1.89
RPS4XP62701 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC3.25□□□□□ -1.89
RPS4XP62701 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC3.25□□□□□ -1.89
RPS4XP62701 AC244505.7-201ENST00000599675 272 ntBASIC3.25□□□□□ -1.89
RPS4XP62701 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC3.25□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 111.7 ms