Protein–RNA interactions for Protein: P55344

LIM2, Lens fiber membrane intrinsic protein, humanhuman

Predictions only

Length 173 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2P55344 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC3.12□□□□□ -1.91
LIM2P55344 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
LIM2P55344 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC3.12□□□□□ -1.91
LIM2P55344 BNIP3P39-201ENST00000601077 554 ntBASIC3.12□□□□□ -1.91
LIM2P55344 HMGN2P28-201ENST00000606102 262 ntBASIC3.12□□□□□ -1.91
LIM2P55344 AL121652.1-201ENST00000608851 448 ntBASIC3.12□□□□□ -1.91
LIM2P55344 AL392048.1-201ENST00000613946 534 ntBASIC3.12□□□□□ -1.91
LIM2P55344 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC3.12□□□□□ -1.91
LIM2P55344 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.12□□□□□ -1.91
LIM2P55344 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC3.12□□□□□ -1.91
LIM2P55344 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC3.12□□□□□ -1.91
LIM2P55344 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.12□□□□□ -1.91
LIM2P55344 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.12□□□□□ -1.91
LIM2P55344 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.12□□□□□ -1.91
LIM2P55344 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.12□□□□□ -1.91
LIM2P55344 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
LIM2P55344 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
LIM2P55344 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC3.11□□□□□ -1.91
LIM2P55344 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.11□□□□□ -1.91
LIM2P55344 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
LIM2P55344 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC3.11□□□□□ -1.91
LIM2P55344 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
LIM2P55344 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
LIM2P55344 RNU6-216P-201ENST00000363282 104 ntBASIC3.11□□□□□ -1.91
LIM2P55344 RNVU1-3-201ENST00000364313 161 ntBASIC3.11□□□□□ -1.91
LIM2P55344 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
LIM2P55344 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
LIM2P55344 MIR607-201ENST00000385241 96 ntBASIC3.11□□□□□ -1.91
LIM2P55344 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
LIM2P55344 RNU6-821P-201ENST00000390995 107 ntBASIC3.11□□□□□ -1.91
LIM2P55344 RPS15AP6-201ENST00000420703 385 ntBASIC3.11□□□□□ -1.91
LIM2P55344 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC3.11□□□□□ -1.91
LIM2P55344 OFD1P12Y-201ENST00000427963 1207 ntBASIC3.11□□□□□ -1.91
LIM2P55344 AC017083.1-201ENST00000428093 483 ntBASIC3.11□□□□□ -1.91
LIM2P55344 OFD1P13Y-201ENST00000431179 1232 ntBASIC3.11□□□□□ -1.91
LIM2P55344 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC3.11□□□□□ -1.91
LIM2P55344 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC3.11□□□□□ -1.91
LIM2P55344 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC3.11□□□□□ -1.91
LIM2P55344 ELOCP13-201ENST00000443934 329 ntBASIC3.11□□□□□ -1.91
LIM2P55344 MTCO2P25-201ENST00000447065 681 ntBASIC3.11□□□□□ -1.91
LIM2P55344 NPM1P49-201ENST00000448027 714 ntBASIC3.11□□□□□ -1.91
LIM2P55344 AL589880.1-201ENST00000448271 287 ntBASIC3.11□□□□□ -1.91
LIM2P55344 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.11□□□□□ -1.91
LIM2P55344 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC3.11□□□□□ -1.91
LIM2P55344 AC108734.3-201ENST00000481241 1165 ntBASIC3.11□□□□□ -1.91
LIM2P55344 AC092045.1-201ENST00000495716 1231 ntBASIC3.11□□□□□ -1.91
LIM2P55344 AC108078.3-201ENST00000502633 489 ntBASIC3.11□□□□□ -1.91
LIM2P55344 UBE2V1P12-201ENST00000503954 474 ntBASIC3.11□□□□□ -1.91
LIM2P55344 AC113420.1-201ENST00000507903 571 ntBASIC3.11□□□□□ -1.91
LIM2P55344 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC3.11□□□□□ -1.91
LIM2P55344 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
LIM2P55344 RNU6-1225P-201ENST00000516336 65 ntBASIC3.11□□□□□ -1.91
LIM2P55344 SNORA64.4-201ENST00000516632 81 ntBASIC3.11□□□□□ -1.91
LIM2P55344 SCARNA20.6-201ENST00000517251 106 ntBASIC3.11□□□□□ -1.91
LIM2P55344 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC3.11□□□□□ -1.91
LIM2P55344 RFPL1S-203ENST00000539579 330 ntBASIC3.11□□□□□ -1.91
LIM2P55344 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC3.11□□□□□ -1.91
LIM2P55344 AC008127.2-201ENST00000549925 1075 ntBASIC3.11□□□□□ -1.91
LIM2P55344 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC3.11□□□□□ -1.91
LIM2P55344 SNRPGP15-201ENST00000600149 222 ntBASIC3.11□□□□□ -1.91
LIM2P55344 AC103881.1-201ENST00000603476 538 ntBASIC3.11□□□□□ -1.91
LIM2P55344 AC025588.3-201ENST00000604182 274 ntBASIC3.11□□□□□ -1.91
LIM2P55344 AL365400.2-201ENST00000605604 902 ntBASIC3.11□□□□□ -1.91
LIM2P55344 AC084757.4-201ENST00000616350 526 ntBASIC3.11□□□□□ -1.91
LIM2P55344 Xist_exon1.1-201ENST00000618930 85 ntBASIC3.11□□□□□ -1.91
LIM2P55344 AC244100.1-202ENST00000621554 382 ntBASIC3.11□□□□□ -1.91
LIM2P55344 AC073348.1-201ENST00000623002 331 ntBASIC3.11□□□□□ -1.91
LIM2P55344 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC3.11□□□□□ -1.91
LIM2P55344 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
LIM2P55344 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
LIM2P55344 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
LIM2P55344 AC107982.1-201ENST00000507171 1300 ntBASIC3.11□□□□□ -1.91
LIM2P55344 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.11□□□□□ -1.91
LIM2P55344 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.11□□□□□ -1.91
LIM2P55344 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
LIM2P55344 AC004972.1-201ENST00000623934 2209 ntBASIC3.11□□□□□ -1.91
LIM2P55344 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
LIM2P55344 NUP58P1-201ENST00000502546 1738 ntBASIC3.1□□□□□ -1.91
LIM2P55344 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
LIM2P55344 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
LIM2P55344 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.1□□□□□ -1.91
LIM2P55344 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC3.1□□□□□ -1.91
LIM2P55344 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
LIM2P55344 SNORD56.3-201ENST00000363507 71 ntBASIC3.1□□□□□ -1.91
LIM2P55344 RNA5SP72-201ENST00000364442 117 ntBASIC3.1□□□□□ -1.91
LIM2P55344 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
LIM2P55344 RPL23AP47-201ENST00000408017 460 ntBASIC3.1□□□□□ -1.91
LIM2P55344 RNA5SP293-201ENST00000410527 113 ntBASIC3.1□□□□□ -1.91
LIM2P55344 AIMP1P1-201ENST00000418670 937 ntBASIC3.1□□□□□ -1.91
LIM2P55344 FNDC3CP-201ENST00000420795 1155 ntBASIC3.1□□□□□ -1.91
LIM2P55344 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC3.1□□□□□ -1.91
LIM2P55344 RPL21P112-201ENST00000434403 463 ntBASIC3.1□□□□□ -1.91
LIM2P55344 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC3.1□□□□□ -1.91
LIM2P55344 MTND2P20-201ENST00000440805 661 ntBASIC3.1□□□□□ -1.91
LIM2P55344 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC3.1□□□□□ -1.91
LIM2P55344 AC007327.1-201ENST00000447461 264 ntBASIC3.1□□□□□ -1.91
LIM2P55344 HMGB3P8-201ENST00000449709 577 ntBASIC3.1□□□□□ -1.91
LIM2P55344 snoU109.4-201ENST00000458953 143 ntBASIC3.1□□□□□ -1.91
LIM2P55344 AC091153.1-201ENST00000466297 402 ntBASIC3.1□□□□□ -1.91
LIM2P55344 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 101 ms