Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
CDH4P55283 OR5BR1P-201ENST00000524992 1330 ntBASIC3.23□□□□□ -1.89
CDH4P55283 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC3.23□□□□□ -1.89
CDH4P55283 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
CDH4P55283 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.23□□□□□ -1.89
CDH4P55283 RNA5SP374-201ENST00000362939 125 ntBASIC3.23□□□□□ -1.89
CDH4P55283 RNU6-353P-201ENST00000364266 108 ntBASIC3.23□□□□□ -1.89
CDH4P55283 DNAH14-203ENST00000366848 929 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
CDH4P55283 RNU6-730P-201ENST00000383954 104 ntBASIC3.23□□□□□ -1.89
CDH4P55283 RNA5SP107-201ENST00000411358 122 ntBASIC3.23□□□□□ -1.89
CDH4P55283 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC3.23□□□□□ -1.89
CDH4P55283 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC3.23□□□□□ -1.89
CDH4P55283 RABEPKP1-201ENST00000440529 1026 ntBASIC3.23□□□□□ -1.89
CDH4P55283 AL050341.1-201ENST00000447743 313 ntBASIC3.23□□□□□ -1.89
CDH4P55283 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC3.23□□□□□ -1.89
CDH4P55283 CCNB1IP1P3-201ENST00000454702 829 ntBASIC3.23□□□□□ -1.89
CDH4P55283 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC3.23□□□□□ -1.89
CDH4P55283 RPL6P9-201ENST00000466502 859 ntBASIC3.23□□□□□ -1.89
CDH4P55283 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.23□□□□□ -1.89
CDH4P55283 AC006483.1-201ENST00000487308 313 ntBASIC3.23□□□□□ -1.89
CDH4P55283 AC108078.3-201ENST00000502633 489 ntBASIC3.23□□□□□ -1.89
CDH4P55283 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC3.23□□□□□ -1.89
CDH4P55283 AC118282.2-201ENST00000508739 374 ntBASIC3.23□□□□□ -1.89
CDH4P55283 MTCYBP37-201ENST00000510642 1133 ntBASIC3.23□□□□□ -1.89
CDH4P55283 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC3.23□□□□□ -1.89
CDH4P55283 AC090833.1-202ENST00000511073 781 ntTSL 3 BASIC3.23□□□□□ -1.89
CDH4P55283 SCARNA20.6-201ENST00000517251 106 ntBASIC3.23□□□□□ -1.89
CDH4P55283 ZNF705CP-201ENST00000530515 889 ntBASIC3.23□□□□□ -1.89
CDH4P55283 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC3.23□□□□□ -1.89
CDH4P55283 AC126177.3-201ENST00000551839 688 ntBASIC3.23□□□□□ -1.89
CDH4P55283 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC3.23□□□□□ -1.89
CDH4P55283 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC3.23□□□□□ -1.89
CDH4P55283 AC068025.2-201ENST00000584958 419 ntTSL 5 BASIC3.23□□□□□ -1.89
CDH4P55283 AC100793.4-201ENST00000613683 429 ntBASIC3.23□□□□□ -1.89
CDH4P55283 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC3.23□□□□□ -1.89
CDH4P55283 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
CDH4P55283 AC099506.2-201ENST00000623074 221 ntBASIC3.23□□□□□ -1.89
CDH4P55283 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC3.23□□□□□ -1.89
CDH4P55283 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC3.23□□□□□ -1.89
CDH4P55283 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC3.22□□□□□ -1.89
CDH4P55283 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
CDH4P55283 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC3.22□□□□□ -1.89
CDH4P55283 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.22□□□□□ -1.89
CDH4P55283 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
CDH4P55283 SNORD82-201ENST00000365530 70 ntBASIC3.22□□□□□ -1.89
CDH4P55283 SNORD15B-201ENST00000384714 146 ntBASIC3.22□□□□□ -1.89
CDH4P55283 AL139098.1-201ENST00000407291 389 ntBASIC3.22□□□□□ -1.89
CDH4P55283 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC3.22□□□□□ -1.89
CDH4P55283 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
CDH4P55283 MTCO2P1-201ENST00000424648 477 ntBASIC3.22□□□□□ -1.89
CDH4P55283 RPL23AP83-201ENST00000434984 473 ntBASIC3.22□□□□□ -1.89
CDH4P55283 HMGN2P20-201ENST00000437531 273 ntBASIC3.22□□□□□ -1.89
CDH4P55283 AC108734.1-201ENST00000439549 399 ntBASIC3.22□□□□□ -1.89
CDH4P55283 AL158053.1-201ENST00000441503 453 ntBASIC3.22□□□□□ -1.89
CDH4P55283 RPL23AP16-201ENST00000441715 421 ntBASIC3.22□□□□□ -1.89
CDH4P55283 AC091179.1-201ENST00000461606 579 ntBASIC3.22□□□□□ -1.89
CDH4P55283 AC006445.1-201ENST00000491925 405 ntBASIC3.22□□□□□ -1.89
CDH4P55283 MTCO2P9-201ENST00000503214 694 ntBASIC3.22□□□□□ -1.89
CDH4P55283 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC3.22□□□□□ -1.89
CDH4P55283 MTND2P31-201ENST00000512602 616 ntBASIC3.22□□□□□ -1.89
CDH4P55283 RNU1-61P-201ENST00000516107 151 ntBASIC3.22□□□□□ -1.89
CDH4P55283 RNU6-334P-201ENST00000517072 102 ntBASIC3.22□□□□□ -1.89
CDH4P55283 AC104027.1-201ENST00000521887 300 ntBASIC3.22□□□□□ -1.89
CDH4P55283 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC3.22□□□□□ -1.89
CDH4P55283 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
CDH4P55283 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC3.22□□□□□ -1.89
CDH4P55283 LYZ-203ENST00000549690 669 ntTSL 2 BASIC3.22□□□□□ -1.89
CDH4P55283 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC3.22□□□□□ -1.89
CDH4P55283 AC037471.2-201ENST00000564941 598 ntBASIC3.22□□□□□ -1.89
CDH4P55283 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC3.22□□□□□ -1.89
CDH4P55283 UBL5P2-201ENST00000583788 219 ntBASIC3.22□□□□□ -1.89
CDH4P55283 AC008507.1-201ENST00000587506 734 ntBASIC3.22□□□□□ -1.89
CDH4P55283 PRELID3BP8-201ENST00000604148 295 ntBASIC3.22□□□□□ -1.89
CDH4P55283 AL591516.1-201ENST00000611326 274 ntBASIC3.22□□□□□ -1.89
CDH4P55283 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC3.22□□□□□ -1.89
CDH4P55283 AL512506.1-201ENST00000613918 449 ntBASIC3.22□□□□□ -1.89
CDH4P55283 AC040168.1-201ENST00000623594 991 ntBASIC3.22□□□□□ -1.89
CDH4P55283 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.22□□□□□ -1.89
CDH4P55283 BX649567.1-201ENST00000642071 1134 ntBASIC3.22□□□□□ -1.89
CDH4P55283 MAPK10-362ENST00000641864 4484 ntBASIC3.22□□□□□ -1.89
CDH4P55283 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC3.22□□□□□ -1.89
CDH4P55283 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
CDH4P55283 AC110774.1-201ENST00000623567 2018 ntBASIC3.22□□□□□ -1.89
CDH4P55283 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
CDH4P55283 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
CDH4P55283 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.21□□□□□ -1.89
CDH4P55283 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.21□□□□□ -1.9
CDH4P55283 RPL7P26-201ENST00000333817 754 ntBASIC3.21□□□□□ -1.9
CDH4P55283 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
CDH4P55283 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC3.21□□□□□ -1.9
CDH4P55283 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC3.21□□□□□ -1.9
CDH4P55283 YPEL5P1-201ENST00000419731 367 ntBASIC3.21□□□□□ -1.9
CDH4P55283 TRAPPC2P4-201ENST00000421750 331 ntBASIC3.21□□□□□ -1.9
CDH4P55283 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC3.21□□□□□ -1.9
CDH4P55283 RPS20P24-201ENST00000457473 361 ntBASIC3.21□□□□□ -1.9
CDH4P55283 ARPC3P2-201ENST00000457786 533 ntBASIC3.21□□□□□ -1.9
CDH4P55283 PABPC1P3-201ENST00000469174 459 ntBASIC3.21□□□□□ -1.9
CDH4P55283 AC010301.1-201ENST00000473936 355 ntBASIC3.21□□□□□ -1.9
CDH4P55283 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC3.21□□□□□ -1.9
CDH4P55283 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC3.21□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 92.3 ms