Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 AC026464.5-201ENST00000562497 722 ntBASIC2.8□□□□□ -1.96
NUP98P52948 NRBF2P1-201ENST00000587407 859 ntBASIC2.8□□□□□ -1.96
NUP98P52948 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC2.8□□□□□ -1.96
NUP98P52948 AK6-205ENST00000618980 483 ntTSL 2 BASIC2.8□□□□□ -1.96
NUP98P52948 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.8□□□□□ -1.96
NUP98P52948 RNU6-304P-201ENST00000364855 107 ntBASIC2.79□□□□□ -1.96
NUP98P52948 OR5H15-201ENST00000383696 930 ntBASIC2.79□□□□□ -1.96
NUP98P52948 RPL23AP62-201ENST00000463396 453 ntBASIC2.79□□□□□ -1.96
NUP98P52948 AC087385.1-201ENST00000475062 312 ntBASIC2.79□□□□□ -1.96
NUP98P52948 RAD51AP1P1-201ENST00000484195 1001 ntBASIC2.79□□□□□ -1.96
NUP98P52948 MTND4P2-201ENST00000507767 1203 ntBASIC2.79□□□□□ -1.96
NUP98P52948 RNU6-237P-201ENST00000515985 71 ntBASIC2.79□□□□□ -1.96
NUP98P52948 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.79□□□□□ -1.96
NUP98P52948 AP003467.2-201ENST00000520175 319 ntBASIC2.79□□□□□ -1.96
NUP98P52948 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
NUP98P52948 AC074029.1-201ENST00000552531 1044 ntBASIC2.79□□□□□ -1.96
NUP98P52948 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC2.79□□□□□ -1.96
NUP98P52948 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC2.79□□□□□ -1.96
NUP98P52948 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC2.79□□□□□ -1.96
NUP98P52948 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC2.79□□□□□ -1.96
NUP98P52948 AL354950.1-201ENST00000614150 568 ntBASIC2.79□□□□□ -1.96
NUP98P52948 Xist_exon1.1-201ENST00000618930 85 ntBASIC2.79□□□□□ -1.96
NUP98P52948 AC004943.3-201ENST00000624116 600 ntBASIC2.79□□□□□ -1.96
NUP98P52948 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC2.79□□□□□ -1.96
NUP98P52948 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC2.79□□□□□ -1.96
NUP98P52948 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.79□□□□□ -1.96
NUP98P52948 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC2.79□□□□□ -1.96
NUP98P52948 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
NUP98P52948 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC2.79□□□□□ -1.96
NUP98P52948 CCNB2P1-201ENST00000399411 1150 ntBASIC2.79□□□□□ -1.96
NUP98P52948 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC2.79□□□□□ -1.96
NUP98P52948 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC2.79□□□□□ -1.96
NUP98P52948 PPP1R42-212ENST00000522909 1282 ntAPPRIS ALT2 TSL 5 BASIC2.79□□□□□ -1.96
NUP98P52948 VN1R84P-201ENST00000593697 235 ntBASIC2.79□□□□□ -1.96
NUP98P52948 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
NUP98P52948 HSP90AA5P-201ENST00000438353 2192 ntBASIC2.78□□□□□ -1.96
NUP98P52948 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.78□□□□□ -1.96
NUP98P52948 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC2.78□□□□□ -1.96
NUP98P52948 EXOC5P1-201ENST00000510543 1969 ntBASIC2.78□□□□□ -1.96
NUP98P52948 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
NUP98P52948 U8.8-201ENST00000365399 135 ntBASIC2.78□□□□□ -1.96
NUP98P52948 SNORD21-201ENST00000383953 95 ntBASIC2.78□□□□□ -1.96
NUP98P52948 RNU6-76P-201ENST00000384060 104 ntBASIC2.78□□□□□ -1.96
NUP98P52948 AL591806.2-201ENST00000433122 173 ntBASIC2.78□□□□□ -1.96
NUP98P52948 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC2.78□□□□□ -1.96
NUP98P52948 HMGB3P30-201ENST00000457863 606 ntBASIC2.78□□□□□ -1.96
NUP98P52948 C11orf65-206ENST00000529391 973 ntAPPRIS P1 TSL 2 BASIC2.78□□□□□ -1.96
NUP98P52948 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC2.78□□□□□ -1.96
NUP98P52948 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC2.78□□□□□ -1.96
NUP98P52948 AC084373.1-201ENST00000603311 235 ntBASIC2.78□□□□□ -1.96
NUP98P52948 AP001521.1-201ENST00000609150 300 ntBASIC2.78□□□□□ -1.96
NUP98P52948 MIR6845-201ENST00000613182 61 ntBASIC2.78□□□□□ -1.96
NUP98P52948 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.78□□□□□ -1.96
NUP98P52948 ANKRD20A9P-201ENST00000457997 2978 ntBASIC2.78□□□□□ -1.96
NUP98P52948 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
NUP98P52948 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC2.78□□□□□ -1.97
NUP98P52948 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC2.77□□□□□ -1.97
NUP98P52948 KLRF1-201ENST00000279545 1091 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
NUP98P52948 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
NUP98P52948 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC2.77□□□□□ -1.97
NUP98P52948 SDCBPP3-201ENST00000419629 891 ntBASIC2.77□□□□□ -1.97
NUP98P52948 AL138785.1-201ENST00000425821 331 ntBASIC2.77□□□□□ -1.97
NUP98P52948 AC010881.1-201ENST00000433830 235 ntBASIC2.77□□□□□ -1.97
NUP98P52948 BTG3P1-201ENST00000435859 716 ntBASIC2.77□□□□□ -1.97
NUP98P52948 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC2.77□□□□□ -1.97
NUP98P52948 CEACAMP4-201ENST00000457676 421 ntBASIC2.77□□□□□ -1.97
NUP98P52948 snoU13.23-201ENST00000458863 104 ntBASIC2.77□□□□□ -1.97
NUP98P52948 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC2.77□□□□□ -1.97
NUP98P52948 OR4R2P-201ENST00000530815 597 ntBASIC2.77□□□□□ -1.97
NUP98P52948 TRAV37-201ENST00000553906 342 ntBASIC2.77□□□□□ -1.97
NUP98P52948 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC2.77□□□□□ -1.97
NUP98P52948 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC2.77□□□□□ -1.97
NUP98P52948 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC2.77□□□□□ -1.97
NUP98P52948 KLRF1-208ENST00000617889 1241 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
NUP98P52948 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC2.77□□□□□ -1.97
NUP98P52948 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.77□□□□□ -1.97
NUP98P52948 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
NUP98P52948 MT-TP-201ENST00000387461 68 ntBASIC2.77□□□□□ -1.97
NUP98P52948 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
NUP98P52948 AL354719.1-201ENST00000406535 843 ntBASIC2.77□□□□□ -1.97
NUP98P52948 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC2.77□□□□□ -1.97
NUP98P52948 AC004263.1-201ENST00000479327 332 ntBASIC2.77□□□□□ -1.97
NUP98P52948 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC2.77□□□□□ -1.97
NUP98P52948 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC2.77□□□□□ -1.97
NUP98P52948 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC2.77□□□□□ -1.97
NUP98P52948 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC2.77□□□□□ -1.97
NUP98P52948 RNA5SP200-201ENST00000516360 103 ntBASIC2.77□□□□□ -1.97
NUP98P52948 SEC11B-201ENST00000518383 499 ntBASIC2.77□□□□□ -1.97
NUP98P52948 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC2.77□□□□□ -1.97
NUP98P52948 MIR4458-201ENST00000578872 75 ntBASIC2.77□□□□□ -1.97
NUP98P52948 AL355816.1-201ENST00000607951 118 ntBASIC2.77□□□□□ -1.97
NUP98P52948 AC103710.1-201ENST00000610003 901 ntBASIC2.77□□□□□ -1.97
NUP98P52948 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC2.77□□□□□ -1.97
NUP98P52948 MIR219B-201ENST00000637023 88 ntBASIC2.77□□□□□ -1.97
NUP98P52948 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
NUP98P52948 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC2.76□□□□□ -1.97
NUP98P52948 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.76□□□□□ -1.97
NUP98P52948 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
NUP98P52948 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
NUP98P52948 ZNF355P-201ENST00000427301 3216 ntBASIC2.76□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 118.2 ms