Protein–RNA interactions for Protein: P43681

CHRNA4, Neuronal acetylcholine receptor subunit alpha-4, humanhuman

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4P43681 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC5.56□□□□□ -1.52
CHRNA4P43681 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
CHRNA4P43681 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC5.56□□□□□ -1.52
CHRNA4P43681 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
CHRNA4P43681 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
CHRNA4P43681 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC5.56□□□□□ -1.52
CHRNA4P43681 AC083899.1-201ENST00000454465 3819 ntBASIC5.55□□□□□ -1.52
CHRNA4P43681 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
CHRNA4P43681 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC5.55□□□□□ -1.52
CHRNA4P43681 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
CHRNA4P43681 AL122126.1-201ENST00000546905 1318 ntBASIC5.55□□□□□ -1.52
CHRNA4P43681 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
CHRNA4P43681 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
CHRNA4P43681 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
CHRNA4P43681 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
CHRNA4P43681 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
CHRNA4P43681 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
CHRNA4P43681 Y_RNA.19-201ENST00000362462 99 ntBASIC5.55□□□□□ -1.52
CHRNA4P43681 Y_RNA.126-201ENST00000363382 111 ntBASIC5.55□□□□□ -1.52
CHRNA4P43681 Y_RNA.551-201ENST00000384661 102 ntBASIC5.55□□□□□ -1.52
CHRNA4P43681 RNA5SP36-201ENST00000410197 133 ntBASIC5.55□□□□□ -1.52
CHRNA4P43681 RNU6-272P-201ENST00000411028 104 ntBASIC5.55□□□□□ -1.52
CHRNA4P43681 Y_RNA.793-201ENST00000411222 111 ntBASIC5.55□□□□□ -1.52
CHRNA4P43681 AC092687.1-201ENST00000418835 389 ntTSL 3 BASIC5.55□□□□□ -1.52
CHRNA4P43681 AC012065.2-201ENST00000421295 375 ntBASIC5.55□□□□□ -1.52
CHRNA4P43681 AL034379.1-201ENST00000423216 253 ntBASIC5.55□□□□□ -1.52
CHRNA4P43681 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC5.55□□□□□ -1.52
CHRNA4P43681 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC5.55□□□□□ -1.52
CHRNA4P43681 RNF219-AS1-202ENST00000444769 590 ntTSL 4 BASIC5.55□□□□□ -1.52
CHRNA4P43681 FCF1P4-201ENST00000448326 183 ntBASIC5.55□□□□□ -1.52
CHRNA4P43681 RNU7-120P-201ENST00000459334 63 ntBASIC5.55□□□□□ -1.52
CHRNA4P43681 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC5.55□□□□□ -1.52
CHRNA4P43681 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC5.55□□□□□ -1.52
CHRNA4P43681 RNA5SP384-201ENST00000516615 116 ntBASIC5.55□□□□□ -1.52
CHRNA4P43681 RNU6-307P-201ENST00000516743 106 ntBASIC5.55□□□□□ -1.52
CHRNA4P43681 LECT2-205ENST00000522943 574 ntTSL 3 BASIC5.55□□□□□ -1.52
CHRNA4P43681 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
CHRNA4P43681 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC5.55□□□□□ -1.52
CHRNA4P43681 SULT1C2P1-202ENST00000562418 459 ntBASIC5.55□□□□□ -1.52
CHRNA4P43681 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC5.55□□□□□ -1.52
CHRNA4P43681 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC5.55□□□□□ -1.52
CHRNA4P43681 AC012616.1-201ENST00000600294 197 ntBASIC5.55□□□□□ -1.52
CHRNA4P43681 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC5.55□□□□□ -1.52
CHRNA4P43681 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC5.55□□□□□ -1.52
CHRNA4P43681 AC010424.2-201ENST00000607594 443 ntBASIC5.55□□□□□ -1.52
CHRNA4P43681 RNA5SP440-201ENST00000612665 119 ntBASIC5.55□□□□□ -1.52
CHRNA4P43681 AC103705.1-201ENST00000619013 241 ntBASIC5.55□□□□□ -1.52
CHRNA4P43681 Metazoa_SRP.130-201ENST00000622625 267 ntBASIC5.55□□□□□ -1.52
CHRNA4P43681 MIR4272-201ENST00000635924 64 ntBASIC5.55□□□□□ -1.52
CHRNA4P43681 PRR14L-201ENST00000327423 10826 ntAPPRIS P2 TSL 5 BASIC5.55□□□□□ -1.52
CHRNA4P43681 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC5.55□□□□□ -1.52
CHRNA4P43681 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
CHRNA4P43681 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
CHRNA4P43681 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
CHRNA4P43681 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
CHRNA4P43681 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
CHRNA4P43681 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
CHRNA4P43681 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
CHRNA4P43681 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
CHRNA4P43681 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC5.55□□□□□ -1.52
CHRNA4P43681 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC5.54□□□□□ -1.52
CHRNA4P43681 MMP13-201ENST00000260302 2716 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CHRNA4P43681 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC5.54□□□□□ -1.52
CHRNA4P43681 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CHRNA4P43681 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
CHRNA4P43681 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CHRNA4P43681 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC5.54□□□□□ -1.52
CHRNA4P43681 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC5.54□□□□□ -1.52
CHRNA4P43681 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
CHRNA4P43681 RN7SKP162-201ENST00000363605 345 ntBASIC5.54□□□□□ -1.52
CHRNA4P43681 Y_RNA.200-201ENST00000364018 102 ntBASIC5.54□□□□□ -1.52
CHRNA4P43681 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC5.54□□□□□ -1.52
CHRNA4P43681 RNU6-1117P-201ENST00000384525 104 ntBASIC5.54□□□□□ -1.52
CHRNA4P43681 MIR450B-201ENST00000401182 78 ntBASIC5.54□□□□□ -1.52
CHRNA4P43681 RN7SKP206-201ENST00000410823 293 ntBASIC5.54□□□□□ -1.52
CHRNA4P43681 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC5.54□□□□□ -1.52
CHRNA4P43681 AL139156.1-201ENST00000412785 841 ntBASIC5.54□□□□□ -1.52
CHRNA4P43681 AC011933.1-201ENST00000413334 321 ntBASIC5.54□□□□□ -1.52
CHRNA4P43681 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC5.54□□□□□ -1.52
CHRNA4P43681 AC068533.1-201ENST00000418542 415 ntBASIC5.54□□□□□ -1.52
CHRNA4P43681 AC233981.1-201ENST00000423224 461 ntBASIC5.54□□□□□ -1.52
CHRNA4P43681 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC5.54□□□□□ -1.52
CHRNA4P43681 AL390119.1-201ENST00000440329 312 ntBASIC5.54□□□□□ -1.52
CHRNA4P43681 RN7SL197P-201ENST00000466981 299 ntBASIC5.54□□□□□ -1.52
CHRNA4P43681 RN7SL188P-201ENST00000469842 285 ntBASIC5.54□□□□□ -1.52
CHRNA4P43681 AC108860.1-201ENST00000484521 383 ntBASIC5.54□□□□□ -1.52
CHRNA4P43681 PPIAP19-201ENST00000486414 492 ntBASIC5.54□□□□□ -1.52
CHRNA4P43681 RPS4XP14-201ENST00000493072 781 ntBASIC5.54□□□□□ -1.52
CHRNA4P43681 CLEC19A-204ENST00000493231 557 ntTSL 3 BASIC5.54□□□□□ -1.52
CHRNA4P43681 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC5.54□□□□□ -1.52
CHRNA4P43681 AC027343.2-201ENST00000513219 343 ntTSL 3 BASIC5.54□□□□□ -1.52
CHRNA4P43681 SNORA25.14-201ENST00000516481 132 ntBASIC5.54□□□□□ -1.52
CHRNA4P43681 RN7SKP82-201ENST00000516786 223 ntBASIC5.54□□□□□ -1.52
CHRNA4P43681 SNORA40.15-201ENST00000516884 107 ntBASIC5.54□□□□□ -1.52
CHRNA4P43681 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC5.54□□□□□ -1.52
CHRNA4P43681 DEFB109D-201ENST00000529497 240 ntBASIC5.54□□□□□ -1.52
CHRNA4P43681 AC008083.2-201ENST00000546707 476 ntBASIC5.54□□□□□ -1.52
CHRNA4P43681 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC5.54□□□□□ -1.52
CHRNA4P43681 AC015720.2-201ENST00000567709 334 ntBASIC5.54□□□□□ -1.52
CHRNA4P43681 AC024614.2-201ENST00000577584 372 ntBASIC5.54□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 92.4 ms