Protein–RNA interactions for Protein: P43489

TNFRSF4, Tumor necrosis factor receptor superfamily member 4, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF4P43489 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC3.45□□□□□ -1.86
TNFRSF4P43489 AL160237.3-201ENST00000604114 1013 ntBASIC3.45□□□□□ -1.86
TNFRSF4P43489 AC128687.1-201ENST00000605304 619 ntBASIC3.45□□□□□ -1.86
TNFRSF4P43489 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC3.45□□□□□ -1.86
TNFRSF4P43489 AC040168.1-201ENST00000623594 991 ntBASIC3.45□□□□□ -1.86
TNFRSF4P43489 AC048347.1-201ENST00000624621 427 ntBASIC3.45□□□□□ -1.86
TNFRSF4P43489 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC3.45□□□□□ -1.86
TNFRSF4P43489 GABPAP-201ENST00000419271 1356 ntBASIC3.45□□□□□ -1.86
TNFRSF4P43489 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC3.45□□□□□ -1.86
TNFRSF4P43489 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
TNFRSF4P43489 AC058791.1-201ENST00000608412 3198 ntBASIC3.45□□□□□ -1.86
TNFRSF4P43489 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
TNFRSF4P43489 MTCO1P23-201ENST00000415223 1526 ntBASIC3.44□□□□□ -1.86
TNFRSF4P43489 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC3.44□□□□□ -1.86
TNFRSF4P43489 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
TNFRSF4P43489 TNPO1P3-201ENST00000436471 2662 ntBASIC3.44□□□□□ -1.86
TNFRSF4P43489 AC068647.1-201ENST00000489539 2265 ntBASIC3.44□□□□□ -1.86
TNFRSF4P43489 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC3.44□□□□□ -1.86
TNFRSF4P43489 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
TNFRSF4P43489 RNU5D-1-201ENST00000363299 116 ntBASIC3.44□□□□□ -1.86
TNFRSF4P43489 RNA5SP235-201ENST00000365411 114 ntBASIC3.44□□□□□ -1.86
TNFRSF4P43489 HSPE1P26-201ENST00000405341 275 ntBASIC3.44□□□□□ -1.86
TNFRSF4P43489 MTCO3P12-201ENST00000416718 547 ntBASIC3.44□□□□□ -1.86
TNFRSF4P43489 AL034347.1-201ENST00000420766 835 ntTSL 3 BASIC3.44□□□□□ -1.86
TNFRSF4P43489 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC3.44□□□□□ -1.86
TNFRSF4P43489 RPL21P66-201ENST00000426566 466 ntBASIC3.44□□□□□ -1.86
TNFRSF4P43489 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC3.44□□□□□ -1.86
TNFRSF4P43489 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC3.44□□□□□ -1.86
TNFRSF4P43489 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC3.44□□□□□ -1.86
TNFRSF4P43489 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC3.44□□□□□ -1.86
TNFRSF4P43489 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC3.44□□□□□ -1.86
TNFRSF4P43489 RPL23AP44-201ENST00000482216 473 ntBASIC3.44□□□□□ -1.86
TNFRSF4P43489 APOOP4-201ENST00000513530 597 ntBASIC3.44□□□□□ -1.86
TNFRSF4P43489 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC3.44□□□□□ -1.86
TNFRSF4P43489 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC3.44□□□□□ -1.86
TNFRSF4P43489 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC3.44□□□□□ -1.86
TNFRSF4P43489 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC3.44□□□□□ -1.86
TNFRSF4P43489 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC3.44□□□□□ -1.86
TNFRSF4P43489 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC3.44□□□□□ -1.86
TNFRSF4P43489 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC3.44□□□□□ -1.86
TNFRSF4P43489 AL138478.1-201ENST00000612252 832 ntBASIC3.44□□□□□ -1.86
TNFRSF4P43489 AC006963.1-201ENST00000624003 1052 ntBASIC3.44□□□□□ -1.86
TNFRSF4P43489 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC3.44□□□□□ -1.86
TNFRSF4P43489 AC127502.3-201ENST00000636170 1206 ntBASIC3.44□□□□□ -1.86
TNFRSF4P43489 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
TNFRSF4P43489 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
TNFRSF4P43489 NCAPGP1-201ENST00000505112 1814 ntBASIC3.44□□□□□ -1.86
TNFRSF4P43489 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
TNFRSF4P43489 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
TNFRSF4P43489 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.43□□□□□ -1.86
TNFRSF4P43489 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC3.43□□□□□ -1.86
TNFRSF4P43489 MAPK10-253ENST00000641010 4072 ntBASIC3.43□□□□□ -1.86
TNFRSF4P43489 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
TNFRSF4P43489 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
TNFRSF4P43489 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.43□□□□□ -1.86
TNFRSF4P43489 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC3.43□□□□□ -1.86
TNFRSF4P43489 MIR128-1-201ENST00000384921 82 ntBASIC3.43□□□□□ -1.86
TNFRSF4P43489 SNORA48.5-201ENST00000391143 135 ntBASIC3.43□□□□□ -1.86
TNFRSF4P43489 ARF4P3-201ENST00000397387 509 ntBASIC3.43□□□□□ -1.86
TNFRSF4P43489 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.43□□□□□ -1.86
TNFRSF4P43489 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC3.43□□□□□ -1.86
TNFRSF4P43489 Z75741.1-201ENST00000446793 314 ntBASIC3.43□□□□□ -1.86
TNFRSF4P43489 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC3.43□□□□□ -1.86
TNFRSF4P43489 RFC5P1-201ENST00000454419 874 ntBASIC3.43□□□□□ -1.86
TNFRSF4P43489 AC010469.1-201ENST00000463864 576 ntBASIC3.43□□□□□ -1.86
TNFRSF4P43489 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC3.43□□□□□ -1.86
TNFRSF4P43489 AC010285.1-201ENST00000470580 392 ntBASIC3.43□□□□□ -1.86
TNFRSF4P43489 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC3.43□□□□□ -1.86
TNFRSF4P43489 TAF8-207ENST00000482432 556 ntTSL 2 BASIC3.43□□□□□ -1.86
TNFRSF4P43489 RN7SL504P-201ENST00000494496 287 ntBASIC3.43□□□□□ -1.86
TNFRSF4P43489 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC3.43□□□□□ -1.86
TNFRSF4P43489 AC112198.1-201ENST00000505369 1220 ntBASIC3.43□□□□□ -1.86
TNFRSF4P43489 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC3.43□□□□□ -1.86
TNFRSF4P43489 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC3.43□□□□□ -1.86
TNFRSF4P43489 AC113420.1-201ENST00000507903 571 ntBASIC3.43□□□□□ -1.86
TNFRSF4P43489 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC3.43□□□□□ -1.86
TNFRSF4P43489 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC3.43□□□□□ -1.86
TNFRSF4P43489 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC3.43□□□□□ -1.86
TNFRSF4P43489 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC3.43□□□□□ -1.86
TNFRSF4P43489 RNU6-1225P-201ENST00000516336 65 ntBASIC3.43□□□□□ -1.86
TNFRSF4P43489 RN7SKP244-201ENST00000516513 307 ntBASIC3.43□□□□□ -1.86
TNFRSF4P43489 SNORA31.20-201ENST00000517111 133 ntBASIC3.43□□□□□ -1.86
TNFRSF4P43489 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC3.43□□□□□ -1.86
TNFRSF4P43489 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC3.43□□□□□ -1.86
TNFRSF4P43489 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC3.43□□□□□ -1.86
TNFRSF4P43489 AP006245.1-201ENST00000522549 120 ntBASIC3.43□□□□□ -1.86
TNFRSF4P43489 AC090281.1-201ENST00000523019 276 ntBASIC3.43□□□□□ -1.86
TNFRSF4P43489 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC3.43□□□□□ -1.86
TNFRSF4P43489 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC3.43□□□□□ -1.86
TNFRSF4P43489 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
TNFRSF4P43489 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC3.43□□□□□ -1.86
TNFRSF4P43489 OR4P1P-201ENST00000530808 1136 ntBASIC3.43□□□□□ -1.86
TNFRSF4P43489 AL139174.1-201ENST00000531489 886 ntBASIC3.43□□□□□ -1.86
TNFRSF4P43489 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC3.43□□□□□ -1.86
TNFRSF4P43489 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC3.43□□□□□ -1.86
TNFRSF4P43489 AC125611.1-201ENST00000549563 229 ntBASIC3.43□□□□□ -1.86
TNFRSF4P43489 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.43□□□□□ -1.86
TNFRSF4P43489 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC3.43□□□□□ -1.86
TNFRSF4P43489 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC3.43□□□□□ -1.86
TNFRSF4P43489 AC020914.4-201ENST00000597690 277 ntBASIC3.43□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 154.2 ms