Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 RPL5P13-201ENST00000462840 709 ntBASIC2.34□□□□□ -2.04
HTTP42858 AC021146.5-201ENST00000503544 545 ntBASIC2.34□□□□□ -2.04
HTTP42858 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC2.34□□□□□ -2.04
HTTP42858 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC2.34□□□□□ -2.04
HTTP42858 MIR3199-1-201ENST00000582434 88 ntBASIC2.34□□□□□ -2.04
HTTP42858 AL583832.1-201ENST00000603227 784 ntBASIC2.34□□□□□ -2.04
HTTP42858 UBE2Q2P2-203ENST00000613592 761 ntBASIC2.34□□□□□ -2.04
HTTP42858 AC008264.2-201ENST00000610193 3731 ntBASIC2.34□□□□□ -2.04
HTTP42858 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.04
HTTP42858 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC2.34□□□□□ -2.04
HTTP42858 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC2.34□□□□□ -2.04
HTTP42858 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
HTTP42858 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
HTTP42858 RPL23AP58-201ENST00000440453 469 ntBASIC2.33□□□□□ -2.04
HTTP42858 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.33□□□□□ -2.04
HTTP42858 AC125238.1-201ENST00000448842 249 ntBASIC2.33□□□□□ -2.04
HTTP42858 RPS6P4-201ENST00000494693 758 ntBASIC2.33□□□□□ -2.04
HTTP42858 SETP1-201ENST00000556014 845 ntBASIC2.33□□□□□ -2.04
HTTP42858 SUB1P3-201ENST00000564581 315 ntBASIC2.33□□□□□ -2.04
HTTP42858 AC093909.5-201ENST00000621839 1799 ntBASIC2.33□□□□□ -2.04
HTTP42858 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC2.33□□□□□ -2.04
HTTP42858 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC2.33□□□□□ -2.04
HTTP42858 ELOCP31-201ENST00000540463 467 ntBASIC2.33□□□□□ -2.04
HTTP42858 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC2.33□□□□□ -2.04
HTTP42858 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC2.33□□□□□ -2.04
HTTP42858 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
HTTP42858 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
HTTP42858 CUBN-201ENST00000377823 705 ntTSL 3 BASIC2.33□□□□□ -2.04
HTTP42858 HMGB1P11-201ENST00000413899 637 ntBASIC2.33□□□□□ -2.04
HTTP42858 AC233279.1-201ENST00000455300 423 ntBASIC2.33□□□□□ -2.04
HTTP42858 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC2.33□□□□□ -2.04
HTTP42858 AC068305.1-201ENST00000497406 726 ntBASIC2.33□□□□□ -2.04
HTTP42858 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC2.33□□□□□ -2.04
HTTP42858 AC104574.1-201ENST00000561182 925 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
HTTP42858 MIR5002-201ENST00000584713 97 ntBASIC2.33□□□□□ -2.04
HTTP42858 AL645944.1-201ENST00000603857 493 ntBASIC2.33□□□□□ -2.04
HTTP42858 AC126118.1-201ENST00000607744 628 ntBASIC2.33□□□□□ -2.04
HTTP42858 AC091834.1-201ENST00000614543 472 ntBASIC2.33□□□□□ -2.04
HTTP42858 AP005901.5-201ENST00000545779 1796 ntBASIC2.32□□□□□ -2.04
HTTP42858 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
HTTP42858 RN7SKP226-201ENST00000364912 300 ntBASIC2.32□□□□□ -2.04
HTTP42858 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
HTTP42858 TVP23BP2-201ENST00000455082 615 ntBASIC2.32□□□□□ -2.04
HTTP42858 XKRY-201ENST00000510392 1100 ntBASIC2.32□□□□□ -2.04
HTTP42858 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC2.32□□□□□ -2.04
HTTP42858 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC2.32□□□□□ -2.04
HTTP42858 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
HTTP42858 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC2.32□□□□□ -2.04
HTTP42858 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
HTTP42858 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC2.32□□□□□ -2.04
HTTP42858 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
HTTP42858 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.32□□□□□ -2.04
HTTP42858 MTND4P35-201ENST00000604257 1375 ntBASIC2.32□□□□□ -2.04
HTTP42858 AP000275.1-201ENST00000411943 390 ntBASIC2.32□□□□□ -2.04
HTTP42858 RPS24P8-201ENST00000431490 402 ntBASIC2.32□□□□□ -2.04
HTTP42858 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC2.32□□□□□ -2.04
HTTP42858 RNA5SP76-201ENST00000516277 87 ntBASIC2.32□□□□□ -2.04
HTTP42858 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC2.32□□□□□ -2.04
HTTP42858 IGLV3-17-201ENST00000519099 244 ntBASIC2.32□□□□□ -2.04
HTTP42858 AC011492.1-201ENST00000600023 315 ntBASIC2.32□□□□□ -2.04
HTTP42858 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC2.32□□□□□ -2.04
HTTP42858 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
HTTP42858 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
HTTP42858 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
HTTP42858 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.31□□□□□ -2.04
HTTP42858 GCNT6-201ENST00000379591 934 ntBASIC2.31□□□□□ -2.04
HTTP42858 OR5H15-201ENST00000383696 930 ntBASIC2.31□□□□□ -2.04
HTTP42858 HMGB1P10-201ENST00000395823 563 ntBASIC2.31□□□□□ -2.04
HTTP42858 SETP15-201ENST00000412724 337 ntBASIC2.31□□□□□ -2.04
HTTP42858 AL163540.1-201ENST00000485382 386 ntBASIC2.31□□□□□ -2.04
HTTP42858 AC022882.1-201ENST00000532142 501 ntBASIC2.31□□□□□ -2.04
HTTP42858 C1GALT1P1-201ENST00000548895 1089 ntBASIC2.31□□□□□ -2.04
HTTP42858 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC2.31□□□□□ -2.04
HTTP42858 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC2.31□□□□□ -2.04
HTTP42858 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC2.31□□□□□ -2.04
HTTP42858 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC2.31□□□□□ -2.04
HTTP42858 AL356806.1-201ENST00000422524 916 ntBASIC2.31□□□□□ -2.04
HTTP42858 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC2.31□□□□□ -2.04
HTTP42858 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC2.31□□□□□ -2.04
HTTP42858 AL589740.1-201ENST00000457513 756 ntTSL 3 BASIC2.31□□□□□ -2.04
HTTP42858 RPL23AP63-201ENST00000498752 471 ntBASIC2.31□□□□□ -2.04
HTTP42858 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC2.31□□□□□ -2.04
HTTP42858 AC010546.1-201ENST00000569391 485 ntBASIC2.31□□□□□ -2.04
HTTP42858 AP001542.2-201ENST00000593141 364 ntBASIC2.31□□□□□ -2.04
HTTP42858 AL160394.1-201ENST00000624765 724 ntBASIC2.31□□□□□ -2.04
HTTP42858 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC2.31□□□□□ -2.04
HTTP42858 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.31□□□□□ -2.04
HTTP42858 AC026241.1-201ENST00000517873 2142 ntBASIC2.31□□□□□ -2.04
HTTP42858 LAP3P1-201ENST00000403648 294 ntBASIC2.31□□□□□ -2.04
HTTP42858 AC009237.2-201ENST00000421358 284 ntBASIC2.31□□□□□ -2.04
HTTP42858 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC2.31□□□□□ -2.04
HTTP42858 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.31□□□□□ -2.04
HTTP42858 AC068025.2-201ENST00000584958 419 ntTSL 5 BASIC2.31□□□□□ -2.04
HTTP42858 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC2.3□□□□□ -2.04
HTTP42858 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.3□□□□□ -2.04
HTTP42858 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.3□□□□□ -2.04
HTTP42858 RPS7P9-201ENST00000414704 586 ntBASIC2.3□□□□□ -2.04
HTTP42858 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.3□□□□□ -2.04
HTTP42858 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC2.3□□□□□ -2.04
HTTP42858 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC2.3□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 99.7 ms