Protein–RNA interactions for Protein: P41235

HNF4A, Hepatocyte nuclear factor 4-alpha, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4AP41235 AC087312.1-201ENST00000471411 480 ntBASIC3.71□□□□□ -1.82
HNF4AP41235 AC084198.1-201ENST00000477747 402 ntBASIC3.71□□□□□ -1.82
HNF4AP41235 VN1R105P-201ENST00000486595 910 ntBASIC3.71□□□□□ -1.82
HNF4AP41235 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC3.71□□□□□ -1.82
HNF4AP41235 PTS-202ENST00000524931 696 ntTSL 3 BASIC3.71□□□□□ -1.82
HNF4AP41235 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC3.71□□□□□ -1.82
HNF4AP41235 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC3.71□□□□□ -1.82
HNF4AP41235 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC3.71□□□□□ -1.82
HNF4AP41235 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC3.71□□□□□ -1.82
HNF4AP41235 AC138915.2-201ENST00000569776 97 ntBASIC3.71□□□□□ -1.82
HNF4AP41235 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC3.71□□□□□ -1.82
HNF4AP41235 AC053481.4-201ENST00000583164 216 ntBASIC3.71□□□□□ -1.82
HNF4AP41235 AC004223.2-201ENST00000590309 544 ntBASIC3.71□□□□□ -1.82
HNF4AP41235 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC3.71□□□□□ -1.82
HNF4AP41235 AC006254.3-201ENST00000603353 884 ntBASIC3.71□□□□□ -1.82
HNF4AP41235 AL137849.1-201ENST00000604767 169 ntBASIC3.71□□□□□ -1.82
HNF4AP41235 AC079416.3-201ENST00000624479 549 ntBASIC3.71□□□□□ -1.82
HNF4AP41235 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC3.71□□□□□ -1.82
HNF4AP41235 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
HNF4AP41235 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC3.71□□□□□ -1.82
HNF4AP41235 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
HNF4AP41235 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
HNF4AP41235 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.82
HNF4AP41235 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC3.71□□□□□ -1.82
HNF4AP41235 AC118273.1-201ENST00000525324 3006 ntBASIC3.7□□□□□ -1.82
HNF4AP41235 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
HNF4AP41235 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.7□□□□□ -1.82
HNF4AP41235 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
HNF4AP41235 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
HNF4AP41235 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.7□□□□□ -1.82
HNF4AP41235 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
HNF4AP41235 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
HNF4AP41235 RNU6-173P-201ENST00000364215 104 ntBASIC3.7□□□□□ -1.82
HNF4AP41235 RNU6-83P-201ENST00000384568 112 ntBASIC3.7□□□□□ -1.82
HNF4AP41235 PPIAP31-201ENST00000405422 495 ntBASIC3.7□□□□□ -1.82
HNF4AP41235 AL590084.1-201ENST00000407885 387 ntBASIC3.7□□□□□ -1.82
HNF4AP41235 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC3.7□□□□□ -1.82
HNF4AP41235 AC109780.2-201ENST00000413467 845 ntBASIC3.7□□□□□ -1.82
HNF4AP41235 AC009237.5-201ENST00000414271 501 ntBASIC3.7□□□□□ -1.82
HNF4AP41235 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC3.7□□□□□ -1.82
HNF4AP41235 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC3.7□□□□□ -1.82
HNF4AP41235 RPL23AP74-201ENST00000437246 471 ntBASIC3.7□□□□□ -1.82
HNF4AP41235 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.7□□□□□ -1.82
HNF4AP41235 RPL17P49-201ENST00000443728 411 ntBASIC3.7□□□□□ -1.82
HNF4AP41235 Z95327.1-201ENST00000446082 482 ntBASIC3.7□□□□□ -1.82
HNF4AP41235 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC3.7□□□□□ -1.82
HNF4AP41235 AC034244.1-201ENST00000507687 207 ntBASIC3.7□□□□□ -1.82
HNF4AP41235 AC113347.3-201ENST00000509113 148 ntBASIC3.7□□□□□ -1.82
HNF4AP41235 RNU6-352P-201ENST00000516908 107 ntBASIC3.7□□□□□ -1.82
HNF4AP41235 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC3.7□□□□□ -1.82
HNF4AP41235 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC3.7□□□□□ -1.82
HNF4AP41235 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC3.7□□□□□ -1.82
HNF4AP41235 EMP1-206ENST00000537612 505 ntTSL 3 BASIC3.7□□□□□ -1.82
HNF4AP41235 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC3.7□□□□□ -1.82
HNF4AP41235 AC125611.1-201ENST00000549563 229 ntBASIC3.7□□□□□ -1.82
HNF4AP41235 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC3.7□□□□□ -1.82
HNF4AP41235 GTF2IP8-201ENST00000560687 584 ntBASIC3.7□□□□□ -1.82
HNF4AP41235 AC090695.1-201ENST00000561269 1222 ntBASIC3.7□□□□□ -1.82
HNF4AP41235 LARP7P2-201ENST00000575306 125 ntBASIC3.7□□□□□ -1.82
HNF4AP41235 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC3.7□□□□□ -1.82
HNF4AP41235 MIR4286-201ENST00000580651 93 ntBASIC3.7□□□□□ -1.82
HNF4AP41235 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC3.7□□□□□ -1.82
HNF4AP41235 VN1R85P-201ENST00000601587 426 ntBASIC3.7□□□□□ -1.82
HNF4AP41235 BDH2P1-201ENST00000602288 736 ntBASIC3.7□□□□□ -1.82
HNF4AP41235 AL390838.2-201ENST00000602394 274 ntBASIC3.7□□□□□ -1.82
HNF4AP41235 AC021171.1-201ENST00000603137 706 ntBASIC3.7□□□□□ -1.82
HNF4AP41235 AC013444.2-201ENST00000603317 787 ntBASIC3.7□□□□□ -1.82
HNF4AP41235 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC3.7□□□□□ -1.82
HNF4AP41235 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
HNF4AP41235 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC3.7□□□□□ -1.82
HNF4AP41235 AL353748.2-201ENST00000622148 471 ntBASIC3.7□□□□□ -1.82
HNF4AP41235 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC3.7□□□□□ -1.82
HNF4AP41235 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
HNF4AP41235 AC006504.1-201ENST00000562493 3666 ntBASIC3.7□□□□□ -1.82
HNF4AP41235 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.7□□□□□ -1.82
HNF4AP41235 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
HNF4AP41235 AC021755.1-201ENST00000559747 1447 ntBASIC3.7□□□□□ -1.82
HNF4AP41235 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
HNF4AP41235 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC3.69□□□□□ -1.82
HNF4AP41235 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.69□□□□□ -1.82
HNF4AP41235 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC3.69□□□□□ -1.82
HNF4AP41235 AL645937.1-201ENST00000641739 1652 ntBASIC3.69□□□□□ -1.82
HNF4AP41235 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC3.69□□□□□ -1.82
HNF4AP41235 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
HNF4AP41235 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
HNF4AP41235 SNORD113-6-201ENST00000363345 75 ntBASIC3.69□□□□□ -1.82
HNF4AP41235 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
HNF4AP41235 AL137014.1-201ENST00000420490 1226 ntBASIC3.69□□□□□ -1.82
HNF4AP41235 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC3.69□□□□□ -1.82
HNF4AP41235 MTND5P25-201ENST00000430499 799 ntBASIC3.69□□□□□ -1.82
HNF4AP41235 IGKV1OR9-2-201ENST00000431378 277 ntBASIC3.69□□□□□ -1.82
HNF4AP41235 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC3.69□□□□□ -1.82
HNF4AP41235 COX7BP2-201ENST00000437976 242 ntBASIC3.69□□□□□ -1.82
HNF4AP41235 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC3.69□□□□□ -1.82
HNF4AP41235 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC3.69□□□□□ -1.82
HNF4AP41235 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
HNF4AP41235 USP9YP34-201ENST00000453983 808 ntBASIC3.69□□□□□ -1.82
HNF4AP41235 MTCO3P20-201ENST00000454926 688 ntBASIC3.69□□□□□ -1.82
HNF4AP41235 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC3.69□□□□□ -1.82
HNF4AP41235 RN7SL330P-201ENST00000469709 307 ntBASIC3.69□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 112.4 ms