Protein–RNA interactions for Protein: P35244

RPA3, Replication protein A 14 kDa subunit, humanhuman

Predicted RBP Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3P35244 MIR3605-201ENST00000583214 100 ntBASIC2.82□□□□□ -1.96
RPA3P35244 OR2BH1P-201ENST00000608850 864 ntBASIC2.82□□□□□ -1.96
RPA3P35244 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC2.82□□□□□ -1.96
RPA3P35244 AL136164.4-201ENST00000625013 2135 ntBASIC2.82□□□□□ -1.96
RPA3P35244 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.82□□□□□ -1.96
RPA3P35244 AC092447.7-201ENST00000422212 1621 ntBASIC2.82□□□□□ -1.96
RPA3P35244 AC118273.1-201ENST00000525324 3006 ntBASIC2.82□□□□□ -1.96
RPA3P35244 U8.9-201ENST00000365667 134 ntBASIC2.81□□□□□ -1.96
RPA3P35244 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC2.81□□□□□ -1.96
RPA3P35244 SNORA48.2-201ENST00000390926 124 ntBASIC2.81□□□□□ -1.96
RPA3P35244 RNU6-837P-201ENST00000391056 108 ntBASIC2.81□□□□□ -1.96
RPA3P35244 SSXP10-201ENST00000402595 565 ntBASIC2.81□□□□□ -1.96
RPA3P35244 SFR1P1-201ENST00000403720 688 ntBASIC2.81□□□□□ -1.96
RPA3P35244 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
RPA3P35244 RNA5SP56-201ENST00000410277 118 ntBASIC2.81□□□□□ -1.96
RPA3P35244 AC109780.2-201ENST00000413467 845 ntBASIC2.81□□□□□ -1.96
RPA3P35244 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC2.81□□□□□ -1.96
RPA3P35244 EEF1A1P41-201ENST00000414667 207 ntBASIC2.81□□□□□ -1.96
RPA3P35244 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
RPA3P35244 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC2.81□□□□□ -1.96
RPA3P35244 AC008280.1-201ENST00000418851 412 ntBASIC2.81□□□□□ -1.96
RPA3P35244 RFESDP1-201ENST00000422350 461 ntBASIC2.81□□□□□ -1.96
RPA3P35244 TRIAP1P1-201ENST00000427062 225 ntBASIC2.81□□□□□ -1.96
RPA3P35244 AC114973.1-201ENST00000429057 632 ntBASIC2.81□□□□□ -1.96
RPA3P35244 AC010881.1-201ENST00000433830 235 ntBASIC2.81□□□□□ -1.96
RPA3P35244 MTND1P33-201ENST00000446251 917 ntBASIC2.81□□□□□ -1.96
RPA3P35244 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC2.81□□□□□ -1.96
RPA3P35244 PTGES3P5-201ENST00000455109 434 ntBASIC2.81□□□□□ -1.96
RPA3P35244 RPS15AP1-201ENST00000457423 391 ntBASIC2.81□□□□□ -1.96
RPA3P35244 S100A11P2-201ENST00000467589 312 ntBASIC2.81□□□□□ -1.96
RPA3P35244 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC2.81□□□□□ -1.96
RPA3P35244 MTND4LP22-201ENST00000508209 276 ntBASIC2.81□□□□□ -1.96
RPA3P35244 MTCO3P44-201ENST00000510977 541 ntBASIC2.81□□□□□ -1.96
RPA3P35244 AC010374.2-201ENST00000512933 535 ntBASIC2.81□□□□□ -1.96
RPA3P35244 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC2.81□□□□□ -1.96
RPA3P35244 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC2.81□□□□□ -1.96
RPA3P35244 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC2.81□□□□□ -1.96
RPA3P35244 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC2.81□□□□□ -1.96
RPA3P35244 CASP1-212ENST00000531166 300 ntTSL 5 BASIC2.81□□□□□ -1.96
RPA3P35244 AC005951.1-201ENST00000576706 485 ntBASIC2.81□□□□□ -1.96
RPA3P35244 AL669831.4-202ENST00000590817 238 ntBASIC2.81□□□□□ -1.96
RPA3P35244 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC2.81□□□□□ -1.96
RPA3P35244 CR381653.2-201ENST00000624041 768 ntBASIC2.81□□□□□ -1.96
RPA3P35244 AC092608.3-201ENST00000625017 386 ntBASIC2.81□□□□□ -1.96
RPA3P35244 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC2.81□□□□□ -1.96
RPA3P35244 ZNF734P-201ENST00000419494 1534 ntBASIC2.81□□□□□ -1.96
RPA3P35244 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC2.81□□□□□ -1.96
RPA3P35244 AC004925.1-201ENST00000624256 2706 ntBASIC2.81□□□□□ -1.96
RPA3P35244 AC096644.4-201ENST00000563417 2912 ntBASIC2.8□□□□□ -1.96
RPA3P35244 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.8□□□□□ -1.96
RPA3P35244 HDX-206ENST00000506585 6158 ntTSL 2 BASIC2.8□□□□□ -1.96
RPA3P35244 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
RPA3P35244 ZNF833P-201ENST00000424938 1494 ntBASIC2.8□□□□□ -1.96
RPA3P35244 AC012361.1-201ENST00000447260 1498 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
RPA3P35244 THUMPD3P1-201ENST00000506556 1480 ntBASIC2.8□□□□□ -1.96
RPA3P35244 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
RPA3P35244 AL645568.2-201ENST00000432815 1337 ntBASIC2.8□□□□□ -1.96
RPA3P35244 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
RPA3P35244 RNU6-50P-201ENST00000362356 103 ntBASIC2.8□□□□□ -1.96
RPA3P35244 C1orf185-201ENST00000371759 915 ntAPPRIS P2 TSL 2 BASIC2.8□□□□□ -1.96
RPA3P35244 RNU6-1005P-201ENST00000384519 107 ntBASIC2.8□□□□□ -1.96
RPA3P35244 AL512633.1-201ENST00000399931 655 ntBASIC2.8□□□□□ -1.96
RPA3P35244 AL031121.1-201ENST00000406553 254 ntBASIC2.8□□□□□ -1.96
RPA3P35244 MRPL50P2-201ENST00000416821 482 ntBASIC2.8□□□□□ -1.96
RPA3P35244 AC114878.1-201ENST00000441166 358 ntBASIC2.8□□□□□ -1.96
RPA3P35244 RPS26P30-201ENST00000443431 335 ntBASIC2.8□□□□□ -1.96
RPA3P35244 RPL17P49-201ENST00000443728 411 ntBASIC2.8□□□□□ -1.96
RPA3P35244 RPS27P5-201ENST00000444247 244 ntBASIC2.8□□□□□ -1.96
RPA3P35244 IGKV1OR-3-201ENST00000446944 348 ntBASIC2.8□□□□□ -1.96
RPA3P35244 RPL23AP23-201ENST00000452590 471 ntBASIC2.8□□□□□ -1.96
RPA3P35244 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC2.8□□□□□ -1.96
RPA3P35244 SETP6-201ENST00000479329 568 ntBASIC2.8□□□□□ -1.96
RPA3P35244 AC093663.2-201ENST00000484625 313 ntBASIC2.8□□□□□ -1.96
RPA3P35244 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC2.8□□□□□ -1.96
RPA3P35244 AC004062.1-201ENST00000509926 645 ntBASIC2.8□□□□□ -1.96
RPA3P35244 RNU1-61P-201ENST00000516107 151 ntBASIC2.8□□□□□ -1.96
RPA3P35244 SCARNA13-201ENST00000516672 275 ntBASIC2.8□□□□□ -1.96
RPA3P35244 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC2.8□□□□□ -1.96
RPA3P35244 OR4A45P-201ENST00000529954 901 ntBASIC2.8□□□□□ -1.96
RPA3P35244 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC2.8□□□□□ -1.96
RPA3P35244 AC093014.1-201ENST00000548926 724 ntBASIC2.8□□□□□ -1.96
RPA3P35244 AC012182.1-201ENST00000570133 895 ntBASIC2.8□□□□□ -1.96
RPA3P35244 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC2.8□□□□□ -1.96
RPA3P35244 AC103881.1-201ENST00000603476 538 ntBASIC2.8□□□□□ -1.96
RPA3P35244 HNRNPDLP4-201ENST00000605144 301 ntBASIC2.8□□□□□ -1.96
RPA3P35244 AC093732.2-201ENST00000607950 274 ntBASIC2.8□□□□□ -1.96
RPA3P35244 AL359198.2-201ENST00000611836 194 ntBASIC2.8□□□□□ -1.96
RPA3P35244 AP003400.6-201ENST00000624698 740 ntBASIC2.8□□□□□ -1.96
RPA3P35244 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC2.8□□□□□ -1.96
RPA3P35244 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
RPA3P35244 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
RPA3P35244 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
RPA3P35244 AC116096.1-201ENST00000566804 2314 ntBASIC2.79□□□□□ -1.96
RPA3P35244 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
RPA3P35244 RNU6-1339P-201ENST00000363574 91 ntBASIC2.79□□□□□ -1.96
RPA3P35244 SNORD51.1-201ENST00000365405 77 ntBASIC2.79□□□□□ -1.96
RPA3P35244 IL6ST-204ENST00000381293 612 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
RPA3P35244 SNORA26.7-201ENST00000391288 122 ntBASIC2.79□□□□□ -1.96
RPA3P35244 AL354719.1-201ENST00000406535 843 ntBASIC2.79□□□□□ -1.96
RPA3P35244 AL591034.1-201ENST00000407447 340 ntBASIC2.79□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 122.6 ms