Protein–RNA interactions for Protein: P33076

CIITA, MHC class II transactivator, humanhuman

Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CIITAP33076 RPL30P9-201ENST00000465586 330 ntBASIC4.33□□□□□ -1.72
CIITAP33076 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC4.33□□□□□ -1.72
CIITAP33076 AHI1-208ENST00000488690 712 ntTSL 5 BASIC4.33□□□□□ -1.72
CIITAP33076 RNF138P1-201ENST00000502765 546 ntBASIC4.33□□□□□ -1.72
CIITAP33076 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC4.33□□□□□ -1.72
CIITAP33076 CBX3P3-201ENST00000508108 532 ntBASIC4.33□□□□□ -1.72
CIITAP33076 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC4.33□□□□□ -1.72
CIITAP33076 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC4.33□□□□□ -1.72
CIITAP33076 AC010625.1-201ENST00000511296 403 ntBASIC4.33□□□□□ -1.72
CIITAP33076 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC4.33□□□□□ -1.72
CIITAP33076 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC4.33□□□□□ -1.72
CIITAP33076 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC4.33□□□□□ -1.72
CIITAP33076 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC4.33□□□□□ -1.72
CIITAP33076 AP002963.1-201ENST00000530590 184 ntBASIC4.33□□□□□ -1.72
CIITAP33076 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC4.33□□□□□ -1.72
CIITAP33076 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC4.33□□□□□ -1.72
CIITAP33076 AL389895.1-201ENST00000554127 252 ntBASIC4.33□□□□□ -1.72
CIITAP33076 GTF2IP22-201ENST00000554443 182 ntBASIC4.33□□□□□ -1.72
CIITAP33076 AL391156.1-201ENST00000554965 554 ntBASIC4.33□□□□□ -1.72
CIITAP33076 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC4.33□□□□□ -1.72
CIITAP33076 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC4.33□□□□□ -1.72
CIITAP33076 AC083899.3-201ENST00000603413 594 ntBASIC4.33□□□□□ -1.72
CIITAP33076 AC080078.2-201ENST00000603766 501 ntBASIC4.33□□□□□ -1.72
CIITAP33076 RNU1-30P-201ENST00000606575 163 ntBASIC4.33□□□□□ -1.72
CIITAP33076 AP001521.1-201ENST00000609150 300 ntBASIC4.33□□□□□ -1.72
CIITAP33076 AC104073.3-201ENST00000610942 955 ntBASIC4.33□□□□□ -1.72
CIITAP33076 AC078899.5-201ENST00000612475 178 ntBASIC4.33□□□□□ -1.72
CIITAP33076 AC005344.1-201ENST00000613391 459 ntBASIC4.33□□□□□ -1.72
CIITAP33076 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC4.33□□□□□ -1.72
CIITAP33076 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC4.33□□□□□ -1.72
CIITAP33076 AC068792.1-201ENST00000621354 417 ntBASIC4.33□□□□□ -1.72
CIITAP33076 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CIITAP33076 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CIITAP33076 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CIITAP33076 MTCO1P24-201ENST00000515438 1558 ntBASIC4.32□□□□□ -1.72
CIITAP33076 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CIITAP33076 ELL2P4-201ENST00000446870 1376 ntBASIC4.32□□□□□ -1.72
CIITAP33076 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC4.32□□□□□ -1.72
CIITAP33076 CUBN-201ENST00000377823 705 ntTSL 3 BASIC4.32□□□□□ -1.72
CIITAP33076 OR5H15-201ENST00000383696 930 ntBASIC4.32□□□□□ -1.72
CIITAP33076 RNU6-657P-201ENST00000383904 107 ntBASIC4.32□□□□□ -1.72
CIITAP33076 U8.11-201ENST00000384699 133 ntBASIC4.32□□□□□ -1.72
CIITAP33076 U8.12-201ENST00000384701 133 ntBASIC4.32□□□□□ -1.72
CIITAP33076 MIR506-201ENST00000384998 124 ntBASIC4.32□□□□□ -1.72
CIITAP33076 RNU6-192P-201ENST00000391253 100 ntBASIC4.32□□□□□ -1.72
CIITAP33076 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC4.32□□□□□ -1.72
CIITAP33076 AL121978.1-201ENST00000402778 359 ntBASIC4.32□□□□□ -1.72
CIITAP33076 RNA5SP239-201ENST00000410218 129 ntBASIC4.32□□□□□ -1.72
CIITAP33076 CYCSP19-201ENST00000411715 316 ntBASIC4.32□□□□□ -1.72
CIITAP33076 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC4.32□□□□□ -1.72
CIITAP33076 MTCO1P21-201ENST00000416634 589 ntBASIC4.32□□□□□ -1.72
CIITAP33076 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC4.32□□□□□ -1.72
CIITAP33076 AC096632.1-201ENST00000427395 310 ntBASIC4.32□□□□□ -1.72
CIITAP33076 OR4F13P-201ENST00000428478 931 ntBASIC4.32□□□□□ -1.72
CIITAP33076 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC4.32□□□□□ -1.72
CIITAP33076 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC4.32□□□□□ -1.72
CIITAP33076 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC4.32□□□□□ -1.72
CIITAP33076 SNORA71B-202ENST00000439232 272 ntBASIC4.32□□□□□ -1.72
CIITAP33076 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC4.32□□□□□ -1.72
CIITAP33076 MTND1P30-201ENST00000441241 901 ntBASIC4.32□□□□□ -1.72
CIITAP33076 NOTCH2P1-201ENST00000443481 624 ntBASIC4.32□□□□□ -1.72
CIITAP33076 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC4.32□□□□□ -1.72
CIITAP33076 MTND1P27-201ENST00000451117 902 ntBASIC4.32□□□□□ -1.72
CIITAP33076 RPL23AP35-201ENST00000451906 501 ntBASIC4.32□□□□□ -1.72
CIITAP33076 U8.18-201ENST00000459285 133 ntBASIC4.32□□□□□ -1.72
CIITAP33076 RPL37P6-202ENST00000464216 403 ntBASIC4.32□□□□□ -1.72
CIITAP33076 AC087385.1-201ENST00000475062 312 ntBASIC4.32□□□□□ -1.72
CIITAP33076 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC4.32□□□□□ -1.72
CIITAP33076 AC139783.2-201ENST00000504847 1145 ntBASIC4.32□□□□□ -1.72
CIITAP33076 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC4.32□□□□□ -1.72
CIITAP33076 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC4.32□□□□□ -1.72
CIITAP33076 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC4.32□□□□□ -1.72
CIITAP33076 RAC1P2-201ENST00000511164 579 ntBASIC4.32□□□□□ -1.72
CIITAP33076 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CIITAP33076 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC4.32□□□□□ -1.72
CIITAP33076 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC4.32□□□□□ -1.72
CIITAP33076 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC4.32□□□□□ -1.72
CIITAP33076 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC4.32□□□□□ -1.72
CIITAP33076 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC4.32□□□□□ -1.72
CIITAP33076 EIF5A2P1-201ENST00000564027 460 ntBASIC4.32□□□□□ -1.72
CIITAP33076 AC074051.3-201ENST00000570238 358 ntBASIC4.32□□□□□ -1.72
CIITAP33076 AC068790.5-201ENST00000602741 355 ntBASIC4.32□□□□□ -1.72
CIITAP33076 U73023.1-201ENST00000603134 700 ntBASIC4.32□□□□□ -1.72
CIITAP33076 SNORA62.6-201ENST00000606322 83 ntBASIC4.32□□□□□ -1.72
CIITAP33076 AC079684.1-201ENST00000621405 437 ntBASIC4.32□□□□□ -1.72
CIITAP33076 AC090337.1-201ENST00000579651 2074 ntBASIC4.32□□□□□ -1.72
CIITAP33076 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CIITAP33076 OFD1P5Y-201ENST00000447585 2590 ntBASIC4.32□□□□□ -1.72
CIITAP33076 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC4.32□□□□□ -1.72
CIITAP33076 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CIITAP33076 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
CIITAP33076 AP004289.2-201ENST00000444413 1457 ntBASIC4.31□□□□□ -1.72
CIITAP33076 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
CIITAP33076 BDP1P-201ENST00000582658 1990 ntBASIC4.31□□□□□ -1.72
CIITAP33076 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
CIITAP33076 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC4.31□□□□□ -1.72
CIITAP33076 OR4A15-201ENST00000314706 1035 ntBASIC4.31□□□□□ -1.72
CIITAP33076 RPL21P132-201ENST00000331267 462 ntBASIC4.31□□□□□ -1.72
CIITAP33076 SNRPEP3-201ENST00000338402 276 ntBASIC4.31□□□□□ -1.72
CIITAP33076 RNU6-1243P-201ENST00000364028 107 ntBASIC4.31□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 108 ms