Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 AC106791.2-201ENST00000604680 391 ntBASIC3.17□□□□□ -1.9
TPM1P09493 RPL23AP88-201ENST00000605759 454 ntBASIC3.17□□□□□ -1.9
TPM1P09493 AC091953.5-201ENST00000622919 233 ntBASIC3.17□□□□□ -1.9
TPM1P09493 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
TPM1P09493 MTND2P41-201ENST00000637599 773 ntBASIC3.17□□□□□ -1.9
TPM1P09493 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC3.17□□□□□ -1.9
TPM1P09493 AC090740.1-201ENST00000623193 2262 ntBASIC3.17□□□□□ -1.9
TPM1P09493 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC3.17□□□□□ -1.9
TPM1P09493 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.16□□□□□ -1.9
TPM1P09493 MTCO1P12-201ENST00000414273 1543 ntBASIC3.16□□□□□ -1.9
TPM1P09493 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
TPM1P09493 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
TPM1P09493 VTRNA1-1-201ENST00000363120 99 ntBASIC3.16□□□□□ -1.9
TPM1P09493 RNU6-821P-201ENST00000390995 107 ntBASIC3.16□□□□□ -1.9
TPM1P09493 ATP5F1P6-201ENST00000402768 767 ntBASIC3.16□□□□□ -1.9
TPM1P09493 AL353692.2-201ENST00000407054 335 ntBASIC3.16□□□□□ -1.9
TPM1P09493 Y_RNA.625-201ENST00000411256 107 ntBASIC3.16□□□□□ -1.9
TPM1P09493 AC097713.2-201ENST00000430199 356 ntBASIC3.16□□□□□ -1.9
TPM1P09493 AL645638.1-201ENST00000440519 361 ntBASIC3.16□□□□□ -1.9
TPM1P09493 RPS29P12-201ENST00000460178 152 ntBASIC3.16□□□□□ -1.9
TPM1P09493 RPL27AP5-201ENST00000469428 449 ntBASIC3.16□□□□□ -1.9
TPM1P09493 AC117440.1-201ENST00000474107 571 ntBASIC3.16□□□□□ -1.9
TPM1P09493 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC3.16□□□□□ -1.9
TPM1P09493 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC3.16□□□□□ -1.9
TPM1P09493 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC3.16□□□□□ -1.9
TPM1P09493 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC3.16□□□□□ -1.9
TPM1P09493 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
TPM1P09493 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC3.16□□□□□ -1.9
TPM1P09493 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC3.16□□□□□ -1.9
TPM1P09493 SNRPGP16-201ENST00000533275 226 ntBASIC3.16□□□□□ -1.9
TPM1P09493 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC3.16□□□□□ -1.9
TPM1P09493 MIR5680-201ENST00000577577 84 ntBASIC3.16□□□□□ -1.9
TPM1P09493 AC090666.1-201ENST00000578241 445 ntBASIC3.16□□□□□ -1.9
TPM1P09493 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
TPM1P09493 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC3.16□□□□□ -1.9
TPM1P09493 AC245036.5-201ENST00000596330 847 ntBASIC3.16□□□□□ -1.9
TPM1P09493 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC3.16□□□□□ -1.9
TPM1P09493 AL606834.2-201ENST00000602954 668 ntBASIC3.16□□□□□ -1.9
TPM1P09493 AP001330.4-201ENST00000604350 154 ntBASIC3.16□□□□□ -1.9
TPM1P09493 AC090617.9-201ENST00000623751 147 ntBASIC3.16□□□□□ -1.9
TPM1P09493 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC3.16□□□□□ -1.9
TPM1P09493 CUL1P1-201ENST00000509510 2425 ntBASIC3.16□□□□□ -1.9
TPM1P09493 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
TPM1P09493 SEC63P2-201ENST00000503863 1939 ntBASIC3.16□□□□□ -1.9
TPM1P09493 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC3.16□□□□□ -1.9
TPM1P09493 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
TPM1P09493 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC3.15□□□□□ -1.9
TPM1P09493 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC3.15□□□□□ -1.9
TPM1P09493 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
TPM1P09493 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC3.15□□□□□ -1.91
TPM1P09493 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
TPM1P09493 PTMAP2-201ENST00000397627 327 ntBASIC3.15□□□□□ -1.91
TPM1P09493 AL512633.1-201ENST00000399931 655 ntBASIC3.15□□□□□ -1.91
TPM1P09493 AL589655.1-201ENST00000405398 482 ntBASIC3.15□□□□□ -1.91
TPM1P09493 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC3.15□□□□□ -1.91
TPM1P09493 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC3.15□□□□□ -1.91
TPM1P09493 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC3.15□□□□□ -1.91
TPM1P09493 ANKRD30BP3-201ENST00000444850 1070 ntBASIC3.15□□□□□ -1.91
TPM1P09493 AC004022.1-201ENST00000447766 1066 ntBASIC3.15□□□□□ -1.91
TPM1P09493 DNAJC19P8-201ENST00000452887 259 ntBASIC3.15□□□□□ -1.91
TPM1P09493 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
TPM1P09493 RPL30P14-201ENST00000482744 348 ntBASIC3.15□□□□□ -1.91
TPM1P09493 OR52A4P-203ENST00000498233 1014 ntBASIC3.15□□□□□ -1.91
TPM1P09493 OR2A20P-203ENST00000498397 1268 ntBASIC3.15□□□□□ -1.91
TPM1P09493 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
TPM1P09493 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC3.15□□□□□ -1.91
TPM1P09493 MTND5P4-201ENST00000514978 288 ntBASIC3.15□□□□□ -1.91
TPM1P09493 AC093535.1-201ENST00000515808 747 ntTSL 3 BASIC3.15□□□□□ -1.91
TPM1P09493 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC3.15□□□□□ -1.91
TPM1P09493 HPRT1P3-201ENST00000539521 576 ntBASIC3.15□□□□□ -1.91
TPM1P09493 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.15□□□□□ -1.91
TPM1P09493 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC3.15□□□□□ -1.91
TPM1P09493 AC015871.2-201ENST00000603605 948 ntBASIC3.15□□□□□ -1.91
TPM1P09493 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC3.15□□□□□ -1.91
TPM1P09493 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC3.15□□□□□ -1.91
TPM1P09493 FRG1DP-201ENST00000635586 771 ntBASIC3.15□□□□□ -1.91
TPM1P09493 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC3.15□□□□□ -1.91
TPM1P09493 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC3.15□□□□□ -1.91
TPM1P09493 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
TPM1P09493 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
TPM1P09493 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
TPM1P09493 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
TPM1P09493 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
TPM1P09493 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
TPM1P09493 RNU6-252P-201ENST00000363232 107 ntBASIC3.14□□□□□ -1.91
TPM1P09493 SNORA71.1-201ENST00000364523 117 ntBASIC3.14□□□□□ -1.91
TPM1P09493 SNORA62.3-201ENST00000365110 153 ntBASIC3.14□□□□□ -1.91
TPM1P09493 RPS4XP3-201ENST00000398541 413 ntBASIC3.14□□□□□ -1.91
TPM1P09493 AL139095.1-201ENST00000404326 391 ntBASIC3.14□□□□□ -1.91
TPM1P09493 RNA5SP492-201ENST00000411330 114 ntBASIC3.14□□□□□ -1.91
TPM1P09493 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC3.14□□□□□ -1.91
TPM1P09493 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC3.14□□□□□ -1.91
TPM1P09493 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC3.14□□□□□ -1.91
TPM1P09493 AL159987.2-201ENST00000432754 307 ntBASIC3.14□□□□□ -1.91
TPM1P09493 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC3.14□□□□□ -1.91
TPM1P09493 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC3.14□□□□□ -1.91
TPM1P09493 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
TPM1P09493 AL590664.1-201ENST00000448065 339 ntBASIC3.14□□□□□ -1.91
TPM1P09493 HGF-207ENST00000453018 721 ntTSL 3 BASIC3.14□□□□□ -1.91
TPM1P09493 AP000705.1-201ENST00000454567 350 ntBASIC3.14□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 104.7 ms