Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC4.76□□□□□ -1.65
HLA-DOAP06340 MTND3P23-201ENST00000431980 347 ntBASIC4.76□□□□□ -1.65
HLA-DOAP06340 AC005008.1-201ENST00000456151 612 ntBASIC4.76□□□□□ -1.65
HLA-DOAP06340 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC4.76□□□□□ -1.65
HLA-DOAP06340 AL139099.1-201ENST00000497398 403 ntBASIC4.76□□□□□ -1.65
HLA-DOAP06340 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC4.76□□□□□ -1.65
HLA-DOAP06340 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC4.76□□□□□ -1.65
HLA-DOAP06340 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC4.76□□□□□ -1.65
HLA-DOAP06340 RNU6-150P-201ENST00000516237 95 ntBASIC4.76□□□□□ -1.65
HLA-DOAP06340 AC013828.2-201ENST00000532487 235 ntBASIC4.76□□□□□ -1.65
HLA-DOAP06340 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC4.76□□□□□ -1.65
HLA-DOAP06340 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC4.76□□□□□ -1.65
HLA-DOAP06340 AC006960.3-201ENST00000561845 705 ntBASIC4.76□□□□□ -1.65
HLA-DOAP06340 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC4.76□□□□□ -1.65
HLA-DOAP06340 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC4.76□□□□□ -1.65
HLA-DOAP06340 MIR3158-1-201ENST00000583596 81 ntBASIC4.76□□□□□ -1.65
HLA-DOAP06340 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC4.76□□□□□ -1.65
HLA-DOAP06340 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC4.76□□□□□ -1.65
HLA-DOAP06340 RNU6-88P-201ENST00000606801 100 ntBASIC4.76□□□□□ -1.65
HLA-DOAP06340 MIR92B-201ENST00000607575 96 ntBASIC4.76□□□□□ -1.65
HLA-DOAP06340 AC023813.4-201ENST00000607580 580 ntBASIC4.76□□□□□ -1.65
HLA-DOAP06340 AL355816.1-201ENST00000607951 118 ntBASIC4.76□□□□□ -1.65
HLA-DOAP06340 AC104010.1-201ENST00000616889 150 ntBASIC4.76□□□□□ -1.65
HLA-DOAP06340 AC006133.1-201ENST00000617106 264 ntBASIC4.76□□□□□ -1.65
HLA-DOAP06340 AC124864.2-201ENST00000624736 186 ntBASIC4.76□□□□□ -1.65
HLA-DOAP06340 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC4.76□□□□□ -1.65
HLA-DOAP06340 AC093591.3-201ENST00000634516 308 ntBASIC4.76□□□□□ -1.65
HLA-DOAP06340 LINC01355-201ENST00000566551 5444 ntBASIC4.76□□□□□ -1.65
HLA-DOAP06340 PCAT14-202ENST00000627127 3935 ntBASIC4.76□□□□□ -1.65
HLA-DOAP06340 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
HLA-DOAP06340 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC4.76□□□□□ -1.65
HLA-DOAP06340 AL442128.2-201ENST00000620246 1824 ntBASIC4.76□□□□□ -1.65
HLA-DOAP06340 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
HLA-DOAP06340 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC4.76□□□□□ -1.65
HLA-DOAP06340 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
HLA-DOAP06340 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
HLA-DOAP06340 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
HLA-DOAP06340 AL606537.1-201ENST00000607258 2011 ntBASIC4.75□□□□□ -1.65
HLA-DOAP06340 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
HLA-DOAP06340 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
HLA-DOAP06340 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.75□□□□□ -1.65
HLA-DOAP06340 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
HLA-DOAP06340 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
HLA-DOAP06340 MIR181A1-201ENST00000385026 110 ntBASIC4.75□□□□□ -1.65
HLA-DOAP06340 U8.14-201ENST00000390843 143 ntBASIC4.75□□□□□ -1.65
HLA-DOAP06340 SNRPEP2-201ENST00000397592 279 ntBASIC4.75□□□□□ -1.65
HLA-DOAP06340 PRRC2CP1-201ENST00000404428 159 ntBASIC4.75□□□□□ -1.65
HLA-DOAP06340 RNU2-28P-201ENST00000410457 189 ntBASIC4.75□□□□□ -1.65
HLA-DOAP06340 AC233981.1-201ENST00000423224 461 ntBASIC4.75□□□□□ -1.65
HLA-DOAP06340 GLRXP1-201ENST00000423261 334 ntBASIC4.75□□□□□ -1.65
HLA-DOAP06340 ZNF863P-201ENST00000426746 417 ntBASIC4.75□□□□□ -1.65
HLA-DOAP06340 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
HLA-DOAP06340 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC4.75□□□□□ -1.65
HLA-DOAP06340 MTND3P21-201ENST00000433774 331 ntBASIC4.75□□□□□ -1.65
HLA-DOAP06340 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC4.75□□□□□ -1.65
HLA-DOAP06340 TPT1P14-201ENST00000448018 505 ntBASIC4.75□□□□□ -1.65
HLA-DOAP06340 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC4.75□□□□□ -1.65
HLA-DOAP06340 AC243772.1-201ENST00000451620 410 ntBASIC4.75□□□□□ -1.65
HLA-DOAP06340 AL033528.1-201ENST00000453780 140 ntBASIC4.75□□□□□ -1.65
HLA-DOAP06340 HMGB1P36-201ENST00000487709 576 ntBASIC4.75□□□□□ -1.65
HLA-DOAP06340 FCF1P3-201ENST00000496394 590 ntBASIC4.75□□□□□ -1.65
HLA-DOAP06340 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC4.75□□□□□ -1.65
HLA-DOAP06340 SNORA67.7-201ENST00000516664 135 ntBASIC4.75□□□□□ -1.65
HLA-DOAP06340 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC4.75□□□□□ -1.65
HLA-DOAP06340 AP004247.1-201ENST00000531556 1289 ntBASIC4.75□□□□□ -1.65
HLA-DOAP06340 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC4.75□□□□□ -1.65
HLA-DOAP06340 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC4.75□□□□□ -1.65
HLA-DOAP06340 EIF5A2P1-201ENST00000564027 460 ntBASIC4.75□□□□□ -1.65
HLA-DOAP06340 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC4.75□□□□□ -1.65
HLA-DOAP06340 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC4.75□□□□□ -1.65
HLA-DOAP06340 MIR4429-201ENST00000580105 73 ntBASIC4.75□□□□□ -1.65
HLA-DOAP06340 SNORD39.3-201ENST00000584451 71 ntBASIC4.75□□□□□ -1.65
HLA-DOAP06340 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC4.75□□□□□ -1.65
HLA-DOAP06340 BNIP3P8-201ENST00000597863 560 ntBASIC4.75□□□□□ -1.65
HLA-DOAP06340 PSMA6P4-201ENST00000603247 718 ntBASIC4.75□□□□□ -1.65
HLA-DOAP06340 HSPE1P14-201ENST00000605812 302 ntBASIC4.75□□□□□ -1.65
HLA-DOAP06340 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC4.75□□□□□ -1.65
HLA-DOAP06340 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC4.75□□□□□ -1.65
HLA-DOAP06340 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
HLA-DOAP06340 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
HLA-DOAP06340 SPATA31D2P-201ENST00000429999 4388 ntBASIC4.75□□□□□ -1.65
HLA-DOAP06340 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
HLA-DOAP06340 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
HLA-DOAP06340 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
HLA-DOAP06340 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
HLA-DOAP06340 AC022031.1-201ENST00000585985 2593 ntBASIC4.74□□□□□ -1.65
HLA-DOAP06340 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC4.74□□□□□ -1.65
HLA-DOAP06340 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC4.74□□□□□ -1.65
HLA-DOAP06340 AC134882.1-201ENST00000603738 1676 ntBASIC4.74□□□□□ -1.65
HLA-DOAP06340 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC4.74□□□□□ -1.65
HLA-DOAP06340 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
HLA-DOAP06340 SYF2-202ENST00000354361 926 ntTSL 2 BASIC4.74□□□□□ -1.65
HLA-DOAP06340 SNORA72.1-201ENST00000363485 129 ntBASIC4.74□□□□□ -1.65
HLA-DOAP06340 RNU6-1090P-201ENST00000364065 94 ntBASIC4.74□□□□□ -1.65
HLA-DOAP06340 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC4.74□□□□□ -1.65
HLA-DOAP06340 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
HLA-DOAP06340 MTCYBP24-201ENST00000420387 1106 ntBASIC4.74□□□□□ -1.65
HLA-DOAP06340 B3GALNT1P1-201ENST00000420569 975 ntBASIC4.74□□□□□ -1.65
HLA-DOAP06340 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC4.74□□□□□ -1.65
HLA-DOAP06340 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC4.74□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 212.5 ms