Protein–RNA interactions for Protein: P02549

SPTA1, Spectrin alpha chain, erythrocytic 1, humanhuman

Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1P02549 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC2.1□□□□□ -2.07
SPTA1P02549 AC103710.2-201ENST00000609912 942 ntBASIC2.1□□□□□ -2.07
SPTA1P02549 AC107871.2-201ENST00000612894 502 ntBASIC2.1□□□□□ -2.07
SPTA1P02549 AC131238.1-201ENST00000617135 328 ntBASIC2.1□□□□□ -2.07
SPTA1P02549 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC2.1□□□□□ -2.07
SPTA1P02549 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC2.1□□□□□ -2.07
SPTA1P02549 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
SPTA1P02549 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
SPTA1P02549 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.09□□□□□ -2.07
SPTA1P02549 MTND5P29-201ENST00000458676 1807 ntBASIC2.09□□□□□ -2.07
SPTA1P02549 RNU6-457P-201ENST00000363999 107 ntBASIC2.09□□□□□ -2.07
SPTA1P02549 RNU6-1-201ENST00000383898 107 ntBASIC2.09□□□□□ -2.07
SPTA1P02549 RNU6-42P-201ENST00000384165 107 ntBASIC2.09□□□□□ -2.07
SPTA1P02549 RNU6-36P-201ENST00000384172 107 ntBASIC2.09□□□□□ -2.07
SPTA1P02549 RNU6-4P-201ENST00000384205 107 ntBASIC2.09□□□□□ -2.07
SPTA1P02549 RNU6-5P-201ENST00000384238 107 ntBASIC2.09□□□□□ -2.07
SPTA1P02549 RNU6-3P-201ENST00000384314 107 ntBASIC2.09□□□□□ -2.07
SPTA1P02549 RNU6-2-201ENST00000384627 107 ntBASIC2.09□□□□□ -2.07
SPTA1P02549 RNU6-9-201ENST00000384776 107 ntBASIC2.09□□□□□ -2.07
SPTA1P02549 RNU6-33P-201ENST00000384793 107 ntBASIC2.09□□□□□ -2.07
SPTA1P02549 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC2.09□□□□□ -2.07
SPTA1P02549 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC2.09□□□□□ -2.07
SPTA1P02549 AC126182.1-201ENST00000478134 357 ntBASIC2.09□□□□□ -2.07
SPTA1P02549 AC011037.1-201ENST00000483964 558 ntBASIC2.09□□□□□ -2.07
SPTA1P02549 RNA5SP220-201ENST00000516298 104 ntBASIC2.09□□□□□ -2.07
SPTA1P02549 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC2.09□□□□□ -2.07
SPTA1P02549 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC2.09□□□□□ -2.07
SPTA1P02549 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC2.09□□□□□ -2.07
SPTA1P02549 HMGB3P26-201ENST00000560051 582 ntBASIC2.09□□□□□ -2.07
SPTA1P02549 AC055876.1-202ENST00000567053 138 ntBASIC2.09□□□□□ -2.07
SPTA1P02549 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC2.09□□□□□ -2.07
SPTA1P02549 RNU6-6P-201ENST00000606623 107 ntBASIC2.09□□□□□ -2.07
SPTA1P02549 DAOA-AS1_1.1-201ENST00000613021 201 ntBASIC2.09□□□□□ -2.07
SPTA1P02549 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
SPTA1P02549 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC2.09□□□□□ -2.07
SPTA1P02549 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
SPTA1P02549 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
SPTA1P02549 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
SPTA1P02549 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.08
SPTA1P02549 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.09□□□□□ -2.08
SPTA1P02549 SNORA11.4-201ENST00000408823 129 ntBASIC2.09□□□□□ -2.08
SPTA1P02549 GTF2IP23-201ENST00000423746 351 ntBASIC2.09□□□□□ -2.08
SPTA1P02549 AC125238.1-201ENST00000448842 249 ntBASIC2.09□□□□□ -2.08
SPTA1P02549 AC080013.2-201ENST00000460866 323 ntBASIC2.09□□□□□ -2.08
SPTA1P02549 AC092991.1-201ENST00000477176 376 ntBASIC2.09□□□□□ -2.08
SPTA1P02549 XKRY-201ENST00000510392 1100 ntBASIC2.09□□□□□ -2.08
SPTA1P02549 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC2.09□□□□□ -2.08
SPTA1P02549 RFPL1S-203ENST00000539579 330 ntBASIC2.09□□□□□ -2.08
SPTA1P02549 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC2.09□□□□□ -2.08
SPTA1P02549 AC005046.1-201ENST00000608515 625 ntBASIC2.09□□□□□ -2.08
SPTA1P02549 U7.8-201ENST00000619968 63 ntBASIC2.09□□□□□ -2.08
SPTA1P02549 AL353684.1-201ENST00000622677 1120 ntBASIC2.09□□□□□ -2.08
SPTA1P02549 MIR1291-201ENST00000627649 87 ntBASIC2.09□□□□□ -2.08
SPTA1P02549 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC2.09□□□□□ -2.08
SPTA1P02549 FRG1DP-201ENST00000635586 771 ntBASIC2.09□□□□□ -2.08
SPTA1P02549 AC025125.1-201ENST00000624743 1922 ntBASIC2.09□□□□□ -2.08
SPTA1P02549 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.08□□□□□ -2.08
SPTA1P02549 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC2.08□□□□□ -2.08
SPTA1P02549 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC2.08□□□□□ -2.08
SPTA1P02549 AC093392.2-201ENST00000450682 337 ntBASIC2.08□□□□□ -2.08
SPTA1P02549 FAM92A1P2-202ENST00000504766 877 ntBASIC2.08□□□□□ -2.08
SPTA1P02549 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC2.08□□□□□ -2.08
SPTA1P02549 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC2.08□□□□□ -2.08
SPTA1P02549 MIR4452-201ENST00000583004 71 ntBASIC2.08□□□□□ -2.08
SPTA1P02549 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC2.08□□□□□ -2.08
SPTA1P02549 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC2.08□□□□□ -2.08
SPTA1P02549 AC107021.2-201ENST00000567714 2095 ntBASIC2.08□□□□□ -2.08
SPTA1P02549 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC2.08□□□□□ -2.08
SPTA1P02549 RNU6-249P-201ENST00000363016 102 ntBASIC2.08□□□□□ -2.08
SPTA1P02549 CUBN-201ENST00000377823 705 ntTSL 3 BASIC2.08□□□□□ -2.08
SPTA1P02549 RN7SKP140-201ENST00000411196 284 ntBASIC2.08□□□□□ -2.08
SPTA1P02549 AC002524.1-201ENST00000411687 547 ntBASIC2.08□□□□□ -2.08
SPTA1P02549 AC092473.1-201ENST00000441098 221 ntBASIC2.08□□□□□ -2.08
SPTA1P02549 AC072039.1-201ENST00000477611 581 ntBASIC2.08□□□□□ -2.08
SPTA1P02549 AC093278.1-201ENST00000494700 600 ntBASIC2.08□□□□□ -2.08
SPTA1P02549 OOSP1P2-201ENST00000579644 351 ntBASIC2.08□□□□□ -2.08
SPTA1P02549 TXNP6-201ENST00000510190 310 ntBASIC2.07□□□□□ -2.08
SPTA1P02549 TRMT112P2-201ENST00000512910 132 ntBASIC2.07□□□□□ -2.08
SPTA1P02549 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC2.07□□□□□ -2.08
SPTA1P02549 AL451137.1-201ENST00000523363 443 ntTSL 3 BASIC2.07□□□□□ -2.08
SPTA1P02549 MIR4285-201ENST00000581001 85 ntBASIC2.07□□□□□ -2.08
SPTA1P02549 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
SPTA1P02549 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
SPTA1P02549 AC012078.1-201ENST00000405035 1646 ntBASIC2.07□□□□□ -2.08
SPTA1P02549 OR52B1P-201ENST00000316506 909 ntBASIC2.07□□□□□ -2.08
SPTA1P02549 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC2.07□□□□□ -2.08
SPTA1P02549 MIR3074-201ENST00000384885 81 ntBASIC2.07□□□□□ -2.08
SPTA1P02549 AC098826.1-201ENST00000433943 471 ntBASIC2.07□□□□□ -2.08
SPTA1P02549 RPL7P54-201ENST00000438336 674 ntBASIC2.07□□□□□ -2.08
SPTA1P02549 RPL23AP58-201ENST00000440453 469 ntBASIC2.07□□□□□ -2.08
SPTA1P02549 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC2.07□□□□□ -2.08
SPTA1P02549 RNU4ATAC15P-201ENST00000516415 126 ntBASIC2.07□□□□□ -2.08
SPTA1P02549 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC2.07□□□□□ -2.08
SPTA1P02549 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC2.07□□□□□ -2.08
SPTA1P02549 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC2.07□□□□□ -2.08
SPTA1P02549 AL355578.1-201ENST00000607405 1328 ntBASIC2.06□□□□□ -2.08
SPTA1P02549 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
SPTA1P02549 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
SPTA1P02549 AL590399.6-201ENST00000446396 307 ntBASIC2.06□□□□□ -2.08
SPTA1P02549 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC2.06□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 93.4 ms