Protein–RNA interactions for Protein: P02462

COL4A1, Collagen alpha-1(IV) chain, humanhuman

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1P02462 AC106901.1-201ENST00000425086 698 ntBASIC2.64□□□□□ -1.99
COL4A1P02462 AC244033.1-201ENST00000426826 870 ntBASIC2.64□□□□□ -1.99
COL4A1P02462 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC2.64□□□□□ -1.99
COL4A1P02462 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
COL4A1P02462 AC003989.2-201ENST00000440224 169 ntBASIC2.64□□□□□ -1.99
COL4A1P02462 AP000926.3-201ENST00000497201 299 ntBASIC2.64□□□□□ -1.99
COL4A1P02462 RNA5SP458-201ENST00000516188 119 ntBASIC2.64□□□□□ -1.99
COL4A1P02462 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC2.64□□□□□ -1.99
COL4A1P02462 AC068339.2-201ENST00000534395 618 ntBASIC2.64□□□□□ -1.99
COL4A1P02462 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC2.64□□□□□ -1.99
COL4A1P02462 AC016993.1-201ENST00000547033 1258 ntTSL 3 BASIC2.64□□□□□ -1.99
COL4A1P02462 AC074029.1-201ENST00000552531 1044 ntBASIC2.64□□□□□ -1.99
COL4A1P02462 AADACP1-206ENST00000561502 1193 ntBASIC2.64□□□□□ -1.99
COL4A1P02462 AC105137.2-201ENST00000569073 466 ntBASIC2.64□□□□□ -1.99
COL4A1P02462 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC2.64□□□□□ -1.99
COL4A1P02462 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC2.64□□□□□ -1.99
COL4A1P02462 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
COL4A1P02462 RLIMP2-201ENST00000427891 1563 ntBASIC2.64□□□□□ -1.99
COL4A1P02462 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
COL4A1P02462 AC002543.1-201ENST00000299783 1954 ntBASIC2.63□□□□□ -1.99
COL4A1P02462 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
COL4A1P02462 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
COL4A1P02462 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC2.63□□□□□ -1.99
COL4A1P02462 TRBV26-201ENST00000456572 344 ntBASIC2.63□□□□□ -1.99
COL4A1P02462 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
COL4A1P02462 RNA5SP200-201ENST00000516360 103 ntBASIC2.63□□□□□ -1.99
COL4A1P02462 AC135628.1-201ENST00000568867 534 ntBASIC2.63□□□□□ -1.99
COL4A1P02462 AC067852.7-201ENST00000623270 535 ntBASIC2.63□□□□□ -1.99
COL4A1P02462 AC022336.2-201ENST00000568966 2538 ntBASIC2.63□□□□□ -1.99
COL4A1P02462 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC2.63□□□□□ -1.99
COL4A1P02462 MTND5P28-201ENST00000438005 1594 ntBASIC2.63□□□□□ -1.99
COL4A1P02462 XIAPP3-201ENST00000312918 795 ntBASIC2.63□□□□□ -1.99
COL4A1P02462 DEFA7P-201ENST00000382676 285 ntBASIC2.63□□□□□ -1.99
COL4A1P02462 SAR1AP2-201ENST00000392696 594 ntBASIC2.63□□□□□ -1.99
COL4A1P02462 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC2.63□□□□□ -1.99
COL4A1P02462 AL159169.1-201ENST00000421119 127 ntBASIC2.63□□□□□ -1.99
COL4A1P02462 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC2.63□□□□□ -1.99
COL4A1P02462 EXTL2P1-201ENST00000446218 416 ntBASIC2.63□□□□□ -1.99
COL4A1P02462 AC116337.1-201ENST00000509680 687 ntBASIC2.63□□□□□ -1.99
COL4A1P02462 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC2.63□□□□□ -1.99
COL4A1P02462 MIR5002-201ENST00000584713 97 ntBASIC2.63□□□□□ -1.99
COL4A1P02462 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
COL4A1P02462 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC2.62□□□□□ -1.99
COL4A1P02462 AC245100.2-201ENST00000454544 1679 ntBASIC2.62□□□□□ -1.99
COL4A1P02462 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC2.62□□□□□ -1.99
COL4A1P02462 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC2.62□□□□□ -1.99
COL4A1P02462 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC2.62□□□□□ -1.99
COL4A1P02462 CYCSP49-201ENST00000420810 319 ntBASIC2.62□□□□□ -1.99
COL4A1P02462 RBM6-203ENST00000421682 684 ntTSL 2 BASIC2.62□□□□□ -1.99
COL4A1P02462 AC004263.1-201ENST00000479327 332 ntBASIC2.62□□□□□ -1.99
COL4A1P02462 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC2.62□□□□□ -1.99
COL4A1P02462 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC2.62□□□□□ -1.99
COL4A1P02462 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC2.62□□□□□ -1.99
COL4A1P02462 AC025260.1-201ENST00000548858 430 ntBASIC2.62□□□□□ -1.99
COL4A1P02462 AC007014.1-201ENST00000572828 610 ntTSL 3 BASIC2.62□□□□□ -1.99
COL4A1P02462 SNRPGP19-201ENST00000603826 189 ntBASIC2.62□□□□□ -1.99
COL4A1P02462 AC023813.4-201ENST00000607580 580 ntBASIC2.62□□□□□ -1.99
COL4A1P02462 LRRC77P-213ENST00000637727 880 ntBASIC2.62□□□□□ -1.99
COL4A1P02462 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC2.62□□□□□ -1.99
COL4A1P02462 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
COL4A1P02462 AC008505.1-203ENST00000637345 1766 ntTSL 5 BASIC2.61□□□□□ -1.99
COL4A1P02462 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
COL4A1P02462 AL512646.1-201ENST00000269395 1077 ntBASIC2.61□□□□□ -1.99
COL4A1P02462 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
COL4A1P02462 MTCO3P31-201ENST00000405526 789 ntBASIC2.61□□□□□ -1.99
COL4A1P02462 RNA5SP239-201ENST00000410218 129 ntBASIC2.61□□□□□ -1.99
COL4A1P02462 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC2.61□□□□□ -1.99
COL4A1P02462 SAR1AP4-201ENST00000429225 591 ntBASIC2.61□□□□□ -1.99
COL4A1P02462 AC004866.2-201ENST00000438285 481 ntBASIC2.61□□□□□ -1.99
COL4A1P02462 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC2.61□□□□□ -1.99
COL4A1P02462 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC2.61□□□□□ -1.99
COL4A1P02462 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
COL4A1P02462 CCNHP1-201ENST00000513311 678 ntBASIC2.61□□□□□ -1.99
COL4A1P02462 AC044913.1-201ENST00000557200 430 ntBASIC2.61□□□□□ -1.99
COL4A1P02462 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC2.61□□□□□ -1.99
COL4A1P02462 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC2.61□□□□□ -1.99
COL4A1P02462 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC2.61□□□□□ -1.99
COL4A1P02462 UBE2Q2P2-203ENST00000613592 761 ntBASIC2.61□□□□□ -1.99
COL4A1P02462 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC2.61□□□□□ -1.99
COL4A1P02462 AC091152.2-201ENST00000591628 2569 ntBASIC2.61□□□□□ -1.99
COL4A1P02462 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.61□□□□□ -1.99
COL4A1P02462 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
COL4A1P02462 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC2.6□□□□□ -1.99
COL4A1P02462 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
COL4A1P02462 SNORA11.4-201ENST00000408823 129 ntBASIC2.6□□□□□ -1.99
COL4A1P02462 RN7SKP123-201ENST00000410732 291 ntBASIC2.6□□□□□ -1.99
COL4A1P02462 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC2.6□□□□□ -1.99
COL4A1P02462 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
COL4A1P02462 AC026412.2-201ENST00000512270 1075 ntBASIC2.6□□□□□ -1.99
COL4A1P02462 AGGF1P8-201ENST00000562979 1000 ntBASIC2.6□□□□□ -1.99
COL4A1P02462 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC2.6□□□□□ -1.99
COL4A1P02462 AC009950.2-201ENST00000636548 183 ntBASIC2.6□□□□□ -1.99
COL4A1P02462 MTND5P29-201ENST00000458676 1807 ntBASIC2.6□□□□□ -1.99
COL4A1P02462 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC2.6□□□□□ -1.99
COL4A1P02462 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
COL4A1P02462 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
COL4A1P02462 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC2.6□□□□□ -1.99
COL4A1P02462 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC2.6□□□□□ -1.99
COL4A1P02462 RNA5SP213-201ENST00000391031 106 ntBASIC2.6□□□□□ -1.99
COL4A1P02462 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC2.6□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 88.9 ms