Protein–RNA interactions for Protein: O75379

VAMP4, Vesicle-associated membrane protein 4, humanhuman

Predictions only

Length 141 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4O75379 AC105914.1-201ENST00000511798 226 ntBASIC5.51□□□□□ -1.53
VAMP4O75379 AC021146.3-201ENST00000511911 260 ntBASIC5.51□□□□□ -1.53
VAMP4O75379 RNA5SP519-201ENST00000516480 119 ntBASIC5.51□□□□□ -1.53
VAMP4O75379 Y_RNA.693-201ENST00000516641 110 ntBASIC5.51□□□□□ -1.53
VAMP4O75379 AF186190.1-201ENST00000517470 480 ntBASIC5.51□□□□□ -1.53
VAMP4O75379 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC5.51□□□□□ -1.53
VAMP4O75379 PHBP17-201ENST00000528576 541 ntBASIC5.51□□□□□ -1.53
VAMP4O75379 RAB11AP2-201ENST00000545905 639 ntBASIC5.51□□□□□ -1.53
VAMP4O75379 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC5.51□□□□□ -1.53
VAMP4O75379 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC5.51□□□□□ -1.53
VAMP4O75379 AL133457.1-201ENST00000564251 987 ntBASIC5.51□□□□□ -1.53
VAMP4O75379 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC5.51□□□□□ -1.53
VAMP4O75379 UBE2V2P2-201ENST00000587677 504 ntBASIC5.51□□□□□ -1.53
VAMP4O75379 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC5.51□□□□□ -1.53
VAMP4O75379 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC5.51□□□□□ -1.53
VAMP4O75379 AC060780.3-201ENST00000589464 80 ntBASIC5.51□□□□□ -1.53
VAMP4O75379 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
VAMP4O75379 AL161729.3-201ENST00000603533 673 ntBASIC5.51□□□□□ -1.53
VAMP4O75379 ACTR3BP1-201ENST00000605584 1247 ntBASIC5.51□□□□□ -1.53
VAMP4O75379 AL158211.4-201ENST00000606988 584 ntBASIC5.51□□□□□ -1.53
VAMP4O75379 AP001330.5-201ENST00000607176 411 ntBASIC5.51□□□□□ -1.53
VAMP4O75379 RNU6-87P-201ENST00000607561 108 ntBASIC5.51□□□□□ -1.53
VAMP4O75379 AL023881.1-201ENST00000621088 301 ntBASIC5.51□□□□□ -1.53
VAMP4O75379 MIR3653-201ENST00000625572 110 ntBASIC5.51□□□□□ -1.53
VAMP4O75379 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC5.51□□□□□ -1.53
VAMP4O75379 U6.101-201ENST00000637707 76 ntBASIC5.51□□□□□ -1.53
VAMP4O75379 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
VAMP4O75379 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC5.51□□□□□ -1.53
VAMP4O75379 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
VAMP4O75379 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
VAMP4O75379 AC138915.3-201ENST00000562908 1389 ntBASIC5.51□□□□□ -1.53
VAMP4O75379 AC010329.2-201ENST00000595195 2737 ntBASIC5.51□□□□□ -1.53
VAMP4O75379 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
VAMP4O75379 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
VAMP4O75379 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
VAMP4O75379 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
VAMP4O75379 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
VAMP4O75379 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
VAMP4O75379 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
VAMP4O75379 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
VAMP4O75379 RNU6-1085P-201ENST00000363576 107 ntBASIC5.5□□□□□ -1.53
VAMP4O75379 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
VAMP4O75379 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC5.5□□□□□ -1.53
VAMP4O75379 RNU6-603P-201ENST00000411403 107 ntBASIC5.5□□□□□ -1.53
VAMP4O75379 RPL23AP26-201ENST00000412728 464 ntBASIC5.5□□□□□ -1.53
VAMP4O75379 PRELID3BP11-201ENST00000414230 479 ntBASIC5.5□□□□□ -1.53
VAMP4O75379 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC5.5□□□□□ -1.53
VAMP4O75379 AL589872.1-201ENST00000426602 288 ntBASIC5.5□□□□□ -1.53
VAMP4O75379 AL132765.1-201ENST00000434165 553 ntBASIC5.5□□□□□ -1.53
VAMP4O75379 AC002486.1-201ENST00000435098 391 ntBASIC5.5□□□□□ -1.53
VAMP4O75379 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC5.5□□□□□ -1.53
VAMP4O75379 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC5.5□□□□□ -1.53
VAMP4O75379 EEF1A1P1-201ENST00000447052 739 ntBASIC5.5□□□□□ -1.53
VAMP4O75379 AC132479.1-201ENST00000449160 144 ntBASIC5.5□□□□□ -1.53
VAMP4O75379 AC009963.2-201ENST00000453431 138 ntBASIC5.5□□□□□ -1.53
VAMP4O75379 C1DP4-201ENST00000455429 424 ntBASIC5.5□□□□□ -1.53
VAMP4O75379 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC5.5□□□□□ -1.53
VAMP4O75379 RN7SL41P-201ENST00000476144 297 ntBASIC5.5□□□□□ -1.53
VAMP4O75379 RBM43P1-201ENST00000476891 1081 ntBASIC5.5□□□□□ -1.53
VAMP4O75379 AC083829.1-201ENST00000503756 657 ntBASIC5.5□□□□□ -1.53
VAMP4O75379 AC114967.1-201ENST00000504890 259 ntBASIC5.5□□□□□ -1.53
VAMP4O75379 IGKV1OR2-1-201ENST00000514060 354 ntBASIC5.5□□□□□ -1.53
VAMP4O75379 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC5.5□□□□□ -1.53
VAMP4O75379 IGLV3-26-201ENST00000520756 302 ntBASIC5.5□□□□□ -1.53
VAMP4O75379 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC5.5□□□□□ -1.53
VAMP4O75379 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC5.5□□□□□ -1.53
VAMP4O75379 AC034268.2-201ENST00000571784 482 ntBASIC5.5□□□□□ -1.53
VAMP4O75379 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC5.5□□□□□ -1.53
VAMP4O75379 AC090948.2-201ENST00000607363 564 ntBASIC5.5□□□□□ -1.53
VAMP4O75379 RNU4-89P-201ENST00000607443 133 ntBASIC5.5□□□□□ -1.53
VAMP4O75379 TUG1_1.1-201ENST00000610654 145 ntBASIC5.5□□□□□ -1.53
VAMP4O75379 FAM27D1-201ENST00000612308 341 ntBASIC5.5□□□□□ -1.53
VAMP4O75379 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC5.5□□□□□ -1.53
VAMP4O75379 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
VAMP4O75379 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC5.5□□□□□ -1.53
VAMP4O75379 MTND4P23-201ENST00000447723 1363 ntBASIC5.5□□□□□ -1.53
VAMP4O75379 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
VAMP4O75379 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC5.5□□□□□ -1.53
VAMP4O75379 AC107081.3-201ENST00000612715 2034 ntBASIC5.5□□□□□ -1.53
VAMP4O75379 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC5.49□□□□□ -1.53
VAMP4O75379 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
VAMP4O75379 CCT4P2-201ENST00000233836 1548 ntBASIC5.49□□□□□ -1.53
VAMP4O75379 FER-202ENST00000438717 1531 ntTSL 2 BASIC5.49□□□□□ -1.53
VAMP4O75379 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC5.49□□□□□ -1.53
VAMP4O75379 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
VAMP4O75379 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
VAMP4O75379 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC5.49□□□□□ -1.53
VAMP4O75379 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC5.49□□□□□ -1.53
VAMP4O75379 ZNF33BP1-201ENST00000452497 1834 ntBASIC5.49□□□□□ -1.53
VAMP4O75379 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
VAMP4O75379 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC5.49□□□□□ -1.53
VAMP4O75379 GNG5P1-201ENST00000255500 204 ntBASIC5.49□□□□□ -1.53
VAMP4O75379 AC067945.1-201ENST00000342609 618 ntBASIC5.49□□□□□ -1.53
VAMP4O75379 RPL32P3-201ENST00000359025 275 ntBASIC5.49□□□□□ -1.53
VAMP4O75379 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
VAMP4O75379 RNU6-441P-201ENST00000384545 106 ntBASIC5.49□□□□□ -1.53
VAMP4O75379 MIR649-201ENST00000384843 97 ntBASIC5.49□□□□□ -1.53
VAMP4O75379 RNU6-1009P-201ENST00000390996 107 ntBASIC5.49□□□□□ -1.53
VAMP4O75379 RPS20P2-201ENST00000402520 389 ntBASIC5.49□□□□□ -1.53
VAMP4O75379 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 118.3 ms