Protein–RNA interactions for Protein: O75161

NPHP4, Nephrocystin-4, humanhuman

Predicted RBP Predictions only

Length 1,426 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4O75161 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC3.49□□□□□ -1.85
NPHP4O75161 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC3.49□□□□□ -1.85
NPHP4O75161 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC3.49□□□□□ -1.85
NPHP4O75161 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC3.49□□□□□ -1.85
NPHP4O75161 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.49□□□□□ -1.85
NPHP4O75161 AC009452.1-201ENST00000640823 606 ntBASIC3.49□□□□□ -1.85
NPHP4O75161 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.49□□□□□ -1.85
NPHP4O75161 DCAF13P3-201ENST00000561147 1334 ntBASIC3.49□□□□□ -1.85
NPHP4O75161 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC3.49□□□□□ -1.85
NPHP4O75161 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
NPHP4O75161 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
NPHP4O75161 MIR421-201ENST00000365696 85 ntBASIC3.48□□□□□ -1.85
NPHP4O75161 RNU6-152P-201ENST00000384037 107 ntBASIC3.48□□□□□ -1.85
NPHP4O75161 USP9YP20-201ENST00000419224 558 ntBASIC3.48□□□□□ -1.85
NPHP4O75161 AL138785.1-201ENST00000425821 331 ntBASIC3.48□□□□□ -1.85
NPHP4O75161 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC3.48□□□□□ -1.85
NPHP4O75161 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC3.48□□□□□ -1.85
NPHP4O75161 BIRC6-AS1-201ENST00000455572 697 ntTSL 3 BASIC3.48□□□□□ -1.85
NPHP4O75161 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC3.48□□□□□ -1.85
NPHP4O75161 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC3.48□□□□□ -1.85
NPHP4O75161 AC117525.1-201ENST00000515228 503 ntBASIC3.48□□□□□ -1.85
NPHP4O75161 AC021269.2-201ENST00000532318 330 ntBASIC3.48□□□□□ -1.85
NPHP4O75161 TRAV11-201ENST00000539512 339 ntBASIC3.48□□□□□ -1.85
NPHP4O75161 AC009268.1-201ENST00000561352 1203 ntBASIC3.48□□□□□ -1.85
NPHP4O75161 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC3.48□□□□□ -1.85
NPHP4O75161 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
NPHP4O75161 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.48□□□□□ -1.85
NPHP4O75161 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.47□□□□□ -1.85
NPHP4O75161 NDUFB4P5-201ENST00000415445 361 ntBASIC3.47□□□□□ -1.85
NPHP4O75161 ARL5AP3-201ENST00000439327 386 ntBASIC3.47□□□□□ -1.85
NPHP4O75161 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC3.47□□□□□ -1.85
NPHP4O75161 HMGB1P25-201ENST00000468402 607 ntBASIC3.47□□□□□ -1.85
NPHP4O75161 AC091917.2-201ENST00000505002 744 ntBASIC3.47□□□□□ -1.85
NPHP4O75161 PCNAP1-201ENST00000505363 709 ntBASIC3.47□□□□□ -1.85
NPHP4O75161 OR4V1P-201ENST00000525394 1140 ntBASIC3.47□□□□□ -1.85
NPHP4O75161 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC3.47□□□□□ -1.85
NPHP4O75161 AC026464.5-201ENST00000562497 722 ntBASIC3.47□□□□□ -1.85
NPHP4O75161 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC3.47□□□□□ -1.85
NPHP4O75161 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
NPHP4O75161 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC3.47□□□□□ -1.85
NPHP4O75161 NPY5R-202ENST00000506953 1418 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
NPHP4O75161 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
NPHP4O75161 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC3.46□□□□□ -1.85
NPHP4O75161 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.85
NPHP4O75161 AL512646.1-201ENST00000269395 1077 ntBASIC3.46□□□□□ -1.86
NPHP4O75161 KLRF1-201ENST00000279545 1091 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
NPHP4O75161 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC3.46□□□□□ -1.86
NPHP4O75161 RNU7-27P-201ENST00000459281 62 ntBASIC3.46□□□□□ -1.86
NPHP4O75161 AC114284.1-201ENST00000511422 1114 ntTSL 2 BASIC3.46□□□□□ -1.86
NPHP4O75161 NDUFB4P9-201ENST00000511646 388 ntBASIC3.46□□□□□ -1.86
NPHP4O75161 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC3.46□□□□□ -1.86
NPHP4O75161 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC3.46□□□□□ -1.86
NPHP4O75161 AC130650.1-201ENST00000570581 415 ntTSL 2 BASIC3.46□□□□□ -1.86
NPHP4O75161 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC3.46□□□□□ -1.86
NPHP4O75161 AC009318.2-201ENST00000610917 651 ntBASIC3.46□□□□□ -1.86
NPHP4O75161 KLRF1-208ENST00000617889 1241 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
NPHP4O75161 VPS8-228ENST00000628962 207 ntTSL 5 BASIC3.46□□□□□ -1.86
NPHP4O75161 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
NPHP4O75161 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC3.46□□□□□ -1.86
NPHP4O75161 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC3.46□□□□□ -1.86
NPHP4O75161 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
NPHP4O75161 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
NPHP4O75161 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
NPHP4O75161 SNORA62.2-201ENST00000364672 152 ntBASIC3.45□□□□□ -1.86
NPHP4O75161 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC3.45□□□□□ -1.86
NPHP4O75161 DEFB127-201ENST00000382388 514 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
NPHP4O75161 AL512633.1-201ENST00000399931 655 ntBASIC3.45□□□□□ -1.86
NPHP4O75161 GSTA9P-201ENST00000406231 611 ntBASIC3.45□□□□□ -1.86
NPHP4O75161 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC3.45□□□□□ -1.86
NPHP4O75161 RPL26P37-201ENST00000411983 438 ntBASIC3.45□□□□□ -1.86
NPHP4O75161 AL121882.1-201ENST00000422893 417 ntBASIC3.45□□□□□ -1.86
NPHP4O75161 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC3.45□□□□□ -1.86
NPHP4O75161 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC3.45□□□□□ -1.86
NPHP4O75161 HMGB1P48-201ENST00000446155 598 ntBASIC3.45□□□□□ -1.86
NPHP4O75161 RAD1P2-201ENST00000446414 663 ntBASIC3.45□□□□□ -1.86
NPHP4O75161 RPL23AP42-201ENST00000471152 471 ntBASIC3.45□□□□□ -1.86
NPHP4O75161 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
NPHP4O75161 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
NPHP4O75161 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC3.45□□□□□ -1.86
NPHP4O75161 SMARCE1P4-201ENST00000523647 241 ntBASIC3.45□□□□□ -1.86
NPHP4O75161 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC3.45□□□□□ -1.86
NPHP4O75161 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC3.45□□□□□ -1.86
NPHP4O75161 AC083760.1-201ENST00000589621 670 ntBASIC3.45□□□□□ -1.86
NPHP4O75161 AC010894.2-203ENST00000606406 499 ntTSL 3 BASIC3.45□□□□□ -1.86
NPHP4O75161 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC3.45□□□□□ -1.86
NPHP4O75161 WARS-244ENST00000627608 123 ntTSL 5 BASIC3.45□□□□□ -1.86
NPHP4O75161 PHKBP1-201ENST00000450951 1951 ntBASIC3.45□□□□□ -1.86
NPHP4O75161 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
NPHP4O75161 AC010329.2-201ENST00000595195 2737 ntBASIC3.45□□□□□ -1.86
NPHP4O75161 OR8K1-201ENST00000279783 1087 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
NPHP4O75161 AL356292.1-201ENST00000283110 373 ntBASIC3.44□□□□□ -1.86
NPHP4O75161 RNU6-666P-201ENST00000363499 107 ntBASIC3.44□□□□□ -1.86
NPHP4O75161 RNU1-91P-201ENST00000364746 163 ntBASIC3.44□□□□□ -1.86
NPHP4O75161 DHFRP5-201ENST00000406944 564 ntBASIC3.44□□□□□ -1.86
NPHP4O75161 AL356806.1-201ENST00000422524 916 ntBASIC3.44□□□□□ -1.86
NPHP4O75161 VDAC1P3-201ENST00000434069 851 ntBASIC3.44□□□□□ -1.86
NPHP4O75161 XKRYP6-201ENST00000440468 1116 ntBASIC3.44□□□□□ -1.86
NPHP4O75161 XKRYP3-201ENST00000442113 1116 ntBASIC3.44□□□□□ -1.86
NPHP4O75161 AL121584.1-201ENST00000453972 519 ntTSL 3 BASIC3.44□□□□□ -1.86
NPHP4O75161 RPL23AP49-201ENST00000492925 468 ntBASIC3.44□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 82.5 ms