Protein–RNA interactions for Protein: O75150

RNF40, E3 ubiquitin-protein ligase BRE1B, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40O75150 AC004584.2-201ENST00000570407 410 ntBASIC6.6□□□□□ -1.35
RNF40O75150 MIR1244-1-201ENST00000612829 85 ntBASIC6.6□□□□□ -1.35
RNF40O75150 DLEU1_1.1-201ENST00000618107 190 ntBASIC6.6□□□□□ -1.35
RNF40O75150 ZNHIT3-208ENST00000619730 926 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
RNF40O75150 AC018628.1-201ENST00000624147 3819 ntBASIC6.6□□□□□ -1.35
RNF40O75150 MIR1244-3-201ENST00000635744 85 ntBASIC6.6□□□□□ -1.35
RNF40O75150 MIR1244-2-201ENST00000636449 85 ntBASIC6.6□□□□□ -1.35
RNF40O75150 MIR1244-4-202ENST00000636813 85 ntBASIC6.6□□□□□ -1.35
RNF40O75150 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC6.6□□□□□ -1.35
RNF40O75150 GTSF1-209ENST00000552397 1621 ntAPPRIS P1 TSL 2 BASIC6.6□□□□□ -1.35
RNF40O75150 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
RNF40O75150 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC6.6□□□□□ -1.35
RNF40O75150 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC6.6□□□□□ -1.35
RNF40O75150 BIRC3-207ENST00000615299 4342 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
RNF40O75150 ADCY10-205ENST00000545172 4966 ntTSL 2 BASIC6.6□□□□□ -1.35
RNF40O75150 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
RNF40O75150 TBC1D15-201ENST00000319106 2159 ntTSL 2 BASIC6.59□□□□□ -1.35
RNF40O75150 IRF5P1-201ENST00000504852 2164 ntBASIC6.59□□□□□ -1.35
RNF40O75150 FILIP1L-202ENST00000354552 3970 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
RNF40O75150 SCN1A-217ENST00000637988 8562 ntAPPRIS P3 TSL 5 BASIC6.59□□□□□ -1.35
RNF40O75150 ZNF836-201ENST00000322146 2811 ntAPPRIS ALT2 TSL 5 BASIC6.59□□□□□ -1.35
RNF40O75150 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
RNF40O75150 GTF3C3-202ENST00000409364 1736 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
RNF40O75150 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC6.59□□□□□ -1.35
RNF40O75150 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC6.59□□□□□ -1.35
RNF40O75150 NSF-206ENST00000575068 2667 ntTSL 2 BASIC6.59□□□□□ -1.35
RNF40O75150 ZC3H14-201ENST00000251038 18281 ntAPPRIS P3 TSL 1 (best) BASIC6.59□□□□□ -1.35
RNF40O75150 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
RNF40O75150 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC6.59□□□□□ -1.35
RNF40O75150 ATP13A4-202ENST00000342695 4208 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
RNF40O75150 RNU6-1226P-201ENST00000384317 107 ntBASIC6.59□□□□□ -1.35
RNF40O75150 HMGB3P7-201ENST00000400214 611 ntBASIC6.59□□□□□ -1.35
RNF40O75150 RNF219-AS1-202ENST00000444769 590 ntTSL 4 BASIC6.59□□□□□ -1.35
RNF40O75150 AC092967.1-201ENST00000449016 481 ntBASIC6.59□□□□□ -1.35
RNF40O75150 AC239809.1-201ENST00000450470 217 ntBASIC6.59□□□□□ -1.35
RNF40O75150 RPS27AP3-201ENST00000453803 454 ntBASIC6.59□□□□□ -1.35
RNF40O75150 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC6.59□□□□□ -1.35
RNF40O75150 RNU7-138P-201ENST00000459479 64 ntBASIC6.59□□□□□ -1.35
RNF40O75150 AL049830.2-201ENST00000480072 201 ntBASIC6.59□□□□□ -1.35
RNF40O75150 RPL12P30-201ENST00000488389 499 ntBASIC6.59□□□□□ -1.35
RNF40O75150 MTND5P41-201ENST00000517498 206 ntBASIC6.59□□□□□ -1.35
RNF40O75150 AC079793.1-201ENST00000553076 713 ntTSL 4 BASIC6.59□□□□□ -1.35
RNF40O75150 AL357153.3-201ENST00000553982 611 ntTSL 3 BASIC6.59□□□□□ -1.35
RNF40O75150 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC6.59□□□□□ -1.35
RNF40O75150 CYCSP38-201ENST00000559840 322 ntBASIC6.59□□□□□ -1.35
RNF40O75150 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
RNF40O75150 AC092121.1-201ENST00000569452 202 ntBASIC6.59□□□□□ -1.35
RNF40O75150 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC6.59□□□□□ -1.35
RNF40O75150 U2.14-201ENST00000615943 113 ntBASIC6.59□□□□□ -1.35
RNF40O75150 AP001264.1-201ENST00000620602 703 ntBASIC6.59□□□□□ -1.35
RNF40O75150 ZNF138-206ENST00000440598 2230 ntTSL 2 BASIC6.59□□□□□ -1.35
RNF40O75150 AL137003.2-201ENST00000606924 2538 ntBASIC6.59□□□□□ -1.35
RNF40O75150 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC6.59□□□□□ -1.35
RNF40O75150 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
RNF40O75150 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
RNF40O75150 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
RNF40O75150 AC116667.1-201ENST00000604855 2072 ntBASIC6.59□□□□□ -1.35
RNF40O75150 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC6.59□□□□□ -1.36
RNF40O75150 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
RNF40O75150 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC6.58□□□□□ -1.36
RNF40O75150 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC6.58□□□□□ -1.36
RNF40O75150 AP000560.1-201ENST00000624150 1937 ntBASIC6.58□□□□□ -1.36
RNF40O75150 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
RNF40O75150 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
RNF40O75150 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC6.58□□□□□ -1.36
RNF40O75150 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC6.58□□□□□ -1.36
RNF40O75150 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC6.58□□□□□ -1.36
RNF40O75150 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
RNF40O75150 HIST1H1T-201ENST00000338379 718 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
RNF40O75150 PRSS37-201ENST00000350549 1189 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
RNF40O75150 Y_RNA.16-201ENST00000362421 102 ntBASIC6.58□□□□□ -1.36
RNF40O75150 RNU6-22P-201ENST00000384355 107 ntBASIC6.58□□□□□ -1.36
RNF40O75150 RPS4XP7-201ENST00000406274 780 ntBASIC6.58□□□□□ -1.36
RNF40O75150 IGKV3OR2-268-201ENST00000421835 350 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
RNF40O75150 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC6.58□□□□□ -1.36
RNF40O75150 MRPS21P2-201ENST00000424704 264 ntBASIC6.58□□□□□ -1.36
RNF40O75150 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC6.58□□□□□ -1.36
RNF40O75150 AC091286.1-201ENST00000431233 461 ntBASIC6.58□□□□□ -1.36
RNF40O75150 AC094019.1-201ENST00000434678 472 ntBASIC6.58□□□□□ -1.36
RNF40O75150 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC6.58□□□□□ -1.36
RNF40O75150 AL590399.4-201ENST00000436561 601 ntBASIC6.58□□□□□ -1.36
RNF40O75150 AC005912.1-201ENST00000495392 255 ntBASIC6.58□□□□□ -1.36
RNF40O75150 RN7SL284P-201ENST00000498823 275 ntBASIC6.58□□□□□ -1.36
RNF40O75150 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC6.58□□□□□ -1.36
RNF40O75150 RN7SKP35-201ENST00000517210 151 ntBASIC6.58□□□□□ -1.36
RNF40O75150 AC100870.1-201ENST00000522035 505 ntBASIC6.58□□□□□ -1.36
RNF40O75150 LDHC-203ENST00000535809 757 ntTSL 5 BASIC6.58□□□□□ -1.36
RNF40O75150 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC6.58□□□□□ -1.36
RNF40O75150 AP001007.3-201ENST00000560744 356 ntTSL 5 BASIC6.58□□□□□ -1.36
RNF40O75150 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC6.58□□□□□ -1.36
RNF40O75150 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC6.58□□□□□ -1.36
RNF40O75150 AC006363.1-201ENST00000603806 463 ntBASIC6.58□□□□□ -1.36
RNF40O75150 CR392039.4-201ENST00000624968 501 ntBASIC6.58□□□□□ -1.36
RNF40O75150 AC073488.3-201ENST00000631611 778 ntBASIC6.58□□□□□ -1.36
RNF40O75150 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC6.58□□□□□ -1.36
RNF40O75150 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
RNF40O75150 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
RNF40O75150 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC6.58□□□□□ -1.36
RNF40O75150 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC6.58□□□□□ -1.36
RNF40O75150 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 80 ms