Protein–RNA interactions for Protein: O60840

CACNA1F, Voltage-dependent L-type calcium channel subunit alpha-1F, humanhuman

Predictions only

Length 1,977 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1FO60840 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC3.78□□□□□ -1.8
CACNA1FO60840 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC3.78□□□□□ -1.8
CACNA1FO60840 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
CACNA1FO60840 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
CACNA1FO60840 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
CACNA1FO60840 MIR1302-8-201ENST00000408342 128 ntBASIC3.78□□□□□ -1.8
CACNA1FO60840 AC016907.1-201ENST00000419483 435 ntBASIC3.78□□□□□ -1.8
CACNA1FO60840 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC3.78□□□□□ -1.8
CACNA1FO60840 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
CACNA1FO60840 HNRNPDLP3-201ENST00000456745 380 ntBASIC3.78□□□□□ -1.8
CACNA1FO60840 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
CACNA1FO60840 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC3.78□□□□□ -1.8
CACNA1FO60840 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC3.78□□□□□ -1.8
CACNA1FO60840 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
CACNA1FO60840 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC3.78□□□□□ -1.8
CACNA1FO60840 RNU6-1231P-201ENST00000517185 103 ntBASIC3.78□□□□□ -1.8
CACNA1FO60840 AC104417.1-201ENST00000523974 751 ntBASIC3.78□□□□□ -1.8
CACNA1FO60840 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC3.78□□□□□ -1.8
CACNA1FO60840 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC3.78□□□□□ -1.8
CACNA1FO60840 AC119751.7-201ENST00000600494 245 ntBASIC3.78□□□□□ -1.8
CACNA1FO60840 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC3.78□□□□□ -1.8
CACNA1FO60840 AC245297.2-201ENST00000610119 565 ntBASIC3.78□□□□□ -1.8
CACNA1FO60840 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC3.78□□□□□ -1.8
CACNA1FO60840 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC3.78□□□□□ -1.8
CACNA1FO60840 AC009313.2-201ENST00000417893 1941 ntBASIC3.78□□□□□ -1.8
CACNA1FO60840 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
CACNA1FO60840 RNU6-31P-201ENST00000384388 108 ntBASIC3.78□□□□□ -1.8
CACNA1FO60840 RNU6-932P-201ENST00000391108 106 ntBASIC3.78□□□□□ -1.8
CACNA1FO60840 RNU6-603P-201ENST00000411403 107 ntBASIC3.78□□□□□ -1.8
CACNA1FO60840 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC3.78□□□□□ -1.8
CACNA1FO60840 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC3.78□□□□□ -1.8
CACNA1FO60840 OR4K6P-201ENST00000416478 897 ntBASIC3.78□□□□□ -1.8
CACNA1FO60840 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC3.78□□□□□ -1.8
CACNA1FO60840 NDUFA5P10-201ENST00000432147 357 ntBASIC3.78□□□□□ -1.8
CACNA1FO60840 MTCO3P5-201ENST00000433620 714 ntBASIC3.78□□□□□ -1.8
CACNA1FO60840 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC3.78□□□□□ -1.8
CACNA1FO60840 AC084290.1-201ENST00000434995 374 ntBASIC3.78□□□□□ -1.8
CACNA1FO60840 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.8
CACNA1FO60840 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC3.78□□□□□ -1.8
CACNA1FO60840 AC093156.1-201ENST00000440382 670 ntBASIC3.78□□□□□ -1.8
CACNA1FO60840 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC3.78□□□□□ -1.8
CACNA1FO60840 RPL7P48-201ENST00000461513 746 ntBASIC3.78□□□□□ -1.8
CACNA1FO60840 AP001992.1-205ENST00000462248 379 ntBASIC3.78□□□□□ -1.8
CACNA1FO60840 RPL5P13-201ENST00000462840 709 ntBASIC3.78□□□□□ -1.8
CACNA1FO60840 AL136126.1-201ENST00000473603 402 ntBASIC3.78□□□□□ -1.8
CACNA1FO60840 AC079203.1-201ENST00000487972 404 ntBASIC3.78□□□□□ -1.8
CACNA1FO60840 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC3.78□□□□□ -1.8
CACNA1FO60840 PDCL2P2-201ENST00000533651 189 ntBASIC3.78□□□□□ -1.8
CACNA1FO60840 ERP27-202ENST00000540097 993 ntTSL 2 BASIC3.78□□□□□ -1.8
CACNA1FO60840 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC3.78□□□□□ -1.8
CACNA1FO60840 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC3.78□□□□□ -1.8
CACNA1FO60840 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC3.78□□□□□ -1.8
CACNA1FO60840 AC079610.2-201ENST00000604818 690 ntBASIC3.78□□□□□ -1.8
CACNA1FO60840 AL356274.1-201ENST00000617064 410 ntBASIC3.78□□□□□ -1.8
CACNA1FO60840 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.81
CACNA1FO60840 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.77□□□□□ -1.81
CACNA1FO60840 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
CACNA1FO60840 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC3.77□□□□□ -1.81
CACNA1FO60840 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.77□□□□□ -1.81
CACNA1FO60840 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
CACNA1FO60840 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC3.77□□□□□ -1.81
CACNA1FO60840 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC3.77□□□□□ -1.81
CACNA1FO60840 SNORA44-201ENST00000384584 132 ntBASIC3.77□□□□□ -1.81
CACNA1FO60840 AP002784.2-201ENST00000397300 549 ntBASIC3.77□□□□□ -1.81
CACNA1FO60840 AC110754.1-201ENST00000399740 601 ntBASIC3.77□□□□□ -1.81
CACNA1FO60840 HSPD1P16-201ENST00000402302 394 ntBASIC3.77□□□□□ -1.81
CACNA1FO60840 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC3.77□□□□□ -1.81
CACNA1FO60840 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC3.77□□□□□ -1.81
CACNA1FO60840 GTF2IP3-201ENST00000433887 494 ntBASIC3.77□□□□□ -1.81
CACNA1FO60840 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC3.77□□□□□ -1.81
CACNA1FO60840 THAP5P1-201ENST00000439089 262 ntBASIC3.77□□□□□ -1.81
CACNA1FO60840 AL354710.1-201ENST00000453641 246 ntBASIC3.77□□□□□ -1.81
CACNA1FO60840 AC244505.3-201ENST00000454598 187 ntBASIC3.77□□□□□ -1.81
CACNA1FO60840 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC3.77□□□□□ -1.81
CACNA1FO60840 AC011825.1-201ENST00000484967 388 ntBASIC3.77□□□□□ -1.81
CACNA1FO60840 AC117522.3-201ENST00000507974 584 ntBASIC3.77□□□□□ -1.81
CACNA1FO60840 MRPS33P3-201ENST00000513456 322 ntBASIC3.77□□□□□ -1.81
CACNA1FO60840 SNORA31.13-201ENST00000516624 135 ntBASIC3.77□□□□□ -1.81
CACNA1FO60840 SNORA31.21-201ENST00000517180 77 ntBASIC3.77□□□□□ -1.81
CACNA1FO60840 HMGB1P1-201ENST00000522557 636 ntBASIC3.77□□□□□ -1.81
CACNA1FO60840 AP003461.1-201ENST00000528866 78 ntBASIC3.77□□□□□ -1.81
CACNA1FO60840 AC090695.1-201ENST00000561269 1222 ntBASIC3.77□□□□□ -1.81
CACNA1FO60840 AC090888.1-201ENST00000561335 1141 ntBASIC3.77□□□□□ -1.81
CACNA1FO60840 AC090425.2-201ENST00000608818 501 ntBASIC3.77□□□□□ -1.81
CACNA1FO60840 AC096586.1-201ENST00000610267 561 ntBASIC3.77□□□□□ -1.81
CACNA1FO60840 AC123768.4-201ENST00000616244 701 ntBASIC3.77□□□□□ -1.81
CACNA1FO60840 AC022509.4-201ENST00000621404 572 ntBASIC3.77□□□□□ -1.81
CACNA1FO60840 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC3.77□□□□□ -1.81
CACNA1FO60840 AC090897.3-201ENST00000636973 1157 ntBASIC3.77□□□□□ -1.81
CACNA1FO60840 AC103706.2-201ENST00000638080 240 ntBASIC3.77□□□□□ -1.81
CACNA1FO60840 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.77□□□□□ -1.81
CACNA1FO60840 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
CACNA1FO60840 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC3.76□□□□□ -1.81
CACNA1FO60840 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.76□□□□□ -1.81
CACNA1FO60840 RNU1-35P-201ENST00000362782 153 ntBASIC3.76□□□□□ -1.81
CACNA1FO60840 MCTS2P-201ENST00000394552 546 ntBASIC3.76□□□□□ -1.81
CACNA1FO60840 RNA5SP107-201ENST00000411358 122 ntBASIC3.76□□□□□ -1.81
CACNA1FO60840 AC245054.2-201ENST00000415639 319 ntBASIC3.76□□□□□ -1.81
CACNA1FO60840 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC3.76□□□□□ -1.81
CACNA1FO60840 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC3.76□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 82.3 ms