Protein–RNA interactions for Protein: O60663

LMX1B, LIM homeobox transcription factor 1-beta, humanhuman

Predictions only

Length 402 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1BO60663 NFIB-202ENST00000380924 840 ntTSL 5 BASIC3.59□□□□□ -1.83
LMX1BO60663 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
LMX1BO60663 MIR708-201ENST00000390708 88 ntBASIC3.59□□□□□ -1.83
LMX1BO60663 Y_RNA.582-201ENST00000391023 95 ntBASIC3.59□□□□□ -1.83
LMX1BO60663 LAP3P1-201ENST00000403648 294 ntBASIC3.59□□□□□ -1.83
LMX1BO60663 SNORA3C-201ENST00000408792 125 ntBASIC3.59□□□□□ -1.83
LMX1BO60663 AL356095.1-201ENST00000417217 199 ntBASIC3.59□□□□□ -1.83
LMX1BO60663 B3GALNT1P1-201ENST00000420569 975 ntBASIC3.59□□□□□ -1.83
LMX1BO60663 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC3.59□□□□□ -1.83
LMX1BO60663 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC3.59□□□□□ -1.83
LMX1BO60663 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC3.59□□□□□ -1.83
LMX1BO60663 AL353597.2-202ENST00000434901 373 ntBASIC3.59□□□□□ -1.83
LMX1BO60663 UBE2V1P8-201ENST00000437166 265 ntBASIC3.59□□□□□ -1.83
LMX1BO60663 AC091862.1-201ENST00000438016 1100 ntBASIC3.59□□□□□ -1.83
LMX1BO60663 RPL21P89-201ENST00000444021 467 ntBASIC3.59□□□□□ -1.83
LMX1BO60663 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC3.59□□□□□ -1.83
LMX1BO60663 MTCO1P27-201ENST00000448269 226 ntBASIC3.59□□□□□ -1.83
LMX1BO60663 AL451050.1-201ENST00000450126 415 ntBASIC3.59□□□□□ -1.83
LMX1BO60663 RPL23AP15-201ENST00000450202 459 ntBASIC3.59□□□□□ -1.83
LMX1BO60663 AL162388.1-201ENST00000450912 352 ntBASIC3.59□□□□□ -1.83
LMX1BO60663 HMGB3P22-202ENST00000451823 572 ntBASIC3.59□□□□□ -1.83
LMX1BO60663 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC3.59□□□□□ -1.83
LMX1BO60663 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC3.59□□□□□ -1.83
LMX1BO60663 RAD23BP3-201ENST00000454157 1152 ntBASIC3.59□□□□□ -1.83
LMX1BO60663 CREM-230ENST00000474931 626 ntTSL 2 BASIC3.59□□□□□ -1.83
LMX1BO60663 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC3.59□□□□□ -1.83
LMX1BO60663 RPS26P15-201ENST00000488067 348 ntBASIC3.59□□□□□ -1.83
LMX1BO60663 AC023424.2-201ENST00000493479 777 ntBASIC3.59□□□□□ -1.83
LMX1BO60663 RPL31P61-201ENST00000496160 376 ntBASIC3.59□□□□□ -1.83
LMX1BO60663 RPS27AP13-201ENST00000498403 237 ntBASIC3.59□□□□□ -1.83
LMX1BO60663 AC025445.1-201ENST00000502728 300 ntBASIC3.59□□□□□ -1.83
LMX1BO60663 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC3.59□□□□□ -1.83
LMX1BO60663 KCTD9P2-201ENST00000512203 1013 ntBASIC3.59□□□□□ -1.83
LMX1BO60663 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
LMX1BO60663 AC116347.2-201ENST00000514912 523 ntBASIC3.59□□□□□ -1.83
LMX1BO60663 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC3.59□□□□□ -1.83
LMX1BO60663 RN7SKP244-201ENST00000516513 307 ntBASIC3.59□□□□□ -1.83
LMX1BO60663 IGKV2-38-201ENST00000517443 247 ntBASIC3.59□□□□□ -1.83
LMX1BO60663 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC3.59□□□□□ -1.83
LMX1BO60663 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC3.59□□□□□ -1.83
LMX1BO60663 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC3.59□□□□□ -1.83
LMX1BO60663 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC3.59□□□□□ -1.83
LMX1BO60663 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC3.59□□□□□ -1.83
LMX1BO60663 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC3.59□□□□□ -1.83
LMX1BO60663 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC3.59□□□□□ -1.83
LMX1BO60663 EIF5A2P1-201ENST00000564027 460 ntBASIC3.59□□□□□ -1.83
LMX1BO60663 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC3.59□□□□□ -1.83
LMX1BO60663 MIR5697-201ENST00000578045 78 ntBASIC3.59□□□□□ -1.83
LMX1BO60663 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC3.59□□□□□ -1.83
LMX1BO60663 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC3.59□□□□□ -1.83
LMX1BO60663 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC3.59□□□□□ -1.83
LMX1BO60663 MIR6867-201ENST00000610636 67 ntBASIC3.59□□□□□ -1.83
LMX1BO60663 CR392039.4-201ENST00000624968 501 ntBASIC3.59□□□□□ -1.83
LMX1BO60663 SEPT14P19-203ENST00000633205 211 ntBASIC3.59□□□□□ -1.83
LMX1BO60663 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC3.59□□□□□ -1.83
LMX1BO60663 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC3.59□□□□□ -1.83
LMX1BO60663 CRYM-AS1-204ENST00000637983 556 ntBASIC3.59□□□□□ -1.83
LMX1BO60663 AC025125.1-201ENST00000624743 1922 ntBASIC3.59□□□□□ -1.83
LMX1BO60663 AC092079.1-201ENST00000558620 1985 ntBASIC3.59□□□□□ -1.83
LMX1BO60663 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC3.59□□□□□ -1.83
LMX1BO60663 AL451142.2-201ENST00000429076 2090 ntBASIC3.59□□□□□ -1.83
LMX1BO60663 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC3.59□□□□□ -1.84
LMX1BO60663 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
LMX1BO60663 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC3.59□□□□□ -1.84
LMX1BO60663 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
LMX1BO60663 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
LMX1BO60663 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
LMX1BO60663 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC3.58□□□□□ -1.84
LMX1BO60663 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC3.58□□□□□ -1.84
LMX1BO60663 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC3.58□□□□□ -1.84
LMX1BO60663 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
LMX1BO60663 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
LMX1BO60663 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC3.58□□□□□ -1.84
LMX1BO60663 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
LMX1BO60663 OR4A15-201ENST00000314706 1035 ntBASIC3.58□□□□□ -1.84
LMX1BO60663 RNU6-984P-201ENST00000363236 109 ntBASIC3.58□□□□□ -1.84
LMX1BO60663 PTMAP2-201ENST00000397627 327 ntBASIC3.58□□□□□ -1.84
LMX1BO60663 PRRC2CP1-201ENST00000404428 159 ntBASIC3.58□□□□□ -1.84
LMX1BO60663 RN7SKP159-201ENST00000410657 292 ntBASIC3.58□□□□□ -1.84
LMX1BO60663 HMGN1P14-201ENST00000412459 517 ntBASIC3.58□□□□□ -1.84
LMX1BO60663 OR8G2P-201ENST00000412796 908 ntBASIC3.58□□□□□ -1.84
LMX1BO60663 AC109780.2-201ENST00000413467 845 ntBASIC3.58□□□□□ -1.84
LMX1BO60663 JKAMPP1-201ENST00000413804 919 ntBASIC3.58□□□□□ -1.84
LMX1BO60663 AC008280.1-201ENST00000418851 412 ntBASIC3.58□□□□□ -1.84
LMX1BO60663 RPL7P30-201ENST00000420888 709 ntBASIC3.58□□□□□ -1.84
LMX1BO60663 RPS27AP14-201ENST00000422868 454 ntBASIC3.58□□□□□ -1.84
LMX1BO60663 SDCBPP2-201ENST00000424643 885 ntBASIC3.58□□□□□ -1.84
LMX1BO60663 AL356583.2-201ENST00000426536 280 ntBASIC3.58□□□□□ -1.84
LMX1BO60663 AL445669.1-201ENST00000426743 755 ntBASIC3.58□□□□□ -1.84
LMX1BO60663 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC3.58□□□□□ -1.84
LMX1BO60663 RPL37P1-201ENST00000432310 284 ntBASIC3.58□□□□□ -1.84
LMX1BO60663 BTF3P10-201ENST00000433415 495 ntBASIC3.58□□□□□ -1.84
LMX1BO60663 AL596276.1-201ENST00000434465 418 ntBASIC3.58□□□□□ -1.84
LMX1BO60663 YWHAZP8-201ENST00000436935 731 ntBASIC3.58□□□□□ -1.84
LMX1BO60663 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC3.58□□□□□ -1.84
LMX1BO60663 AL353572.1-201ENST00000442490 417 ntBASIC3.58□□□□□ -1.84
LMX1BO60663 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC3.58□□□□□ -1.84
LMX1BO60663 AC098824.1-201ENST00000453565 980 ntBASIC3.58□□□□□ -1.84
LMX1BO60663 AC097493.1-201ENST00000463958 372 ntBASIC3.58□□□□□ -1.84
LMX1BO60663 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC3.58□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 93.7 ms