Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 AC010745.4-201ENST00000420130 740 ntTSL 5 BASIC1.93□□□□□ -2.1
SSSCA1O60232 FNDC3CP-201ENST00000420795 1155 ntBASIC1.93□□□□□ -2.1
SSSCA1O60232 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC1.93□□□□□ -2.1
SSSCA1O60232 AL031663.1-201ENST00000437445 219 ntBASIC1.93□□□□□ -2.1
SSSCA1O60232 AC010301.1-201ENST00000473936 355 ntBASIC1.93□□□□□ -2.1
SSSCA1O60232 RPS4XP6-201ENST00000477670 797 ntBASIC1.93□□□□□ -2.1
SSSCA1O60232 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC1.93□□□□□ -2.1
SSSCA1O60232 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC1.93□□□□□ -2.1
SSSCA1O60232 INPP4B-206ENST00000506217 673 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
SSSCA1O60232 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC1.93□□□□□ -2.1
SSSCA1O60232 CDC42P4-201ENST00000510507 563 ntBASIC1.93□□□□□ -2.1
SSSCA1O60232 HMGB3P3-201ENST00000510526 400 ntBASIC1.93□□□□□ -2.1
SSSCA1O60232 TTC39CP1-201ENST00000512513 755 ntBASIC1.93□□□□□ -2.1
SSSCA1O60232 RN7SKP40-201ENST00000517211 242 ntBASIC1.93□□□□□ -2.1
SSSCA1O60232 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC1.93□□□□□ -2.1
SSSCA1O60232 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC1.93□□□□□ -2.1
SSSCA1O60232 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC1.93□□□□□ -2.1
SSSCA1O60232 CKS1BP1-201ENST00000555221 240 ntBASIC1.93□□□□□ -2.1
SSSCA1O60232 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC1.93□□□□□ -2.1
SSSCA1O60232 ACTR3BP3-201ENST00000565577 979 ntBASIC1.93□□□□□ -2.1
SSSCA1O60232 MYL12BP1-201ENST00000569826 507 ntBASIC1.93□□□□□ -2.1
SSSCA1O60232 AL157938.2-209ENST00000589128 792 ntTSL 2 BASIC1.93□□□□□ -2.1
SSSCA1O60232 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC1.93□□□□□ -2.1
SSSCA1O60232 AC079880.2-201ENST00000603790 1213 ntBASIC1.93□□□□□ -2.1
SSSCA1O60232 AC106791.2-201ENST00000604680 391 ntBASIC1.93□□□□□ -2.1
SSSCA1O60232 AC007619.2-201ENST00000605743 379 ntBASIC1.93□□□□□ -2.1
SSSCA1O60232 AC067747.1-201ENST00000608026 250 ntBASIC1.93□□□□□ -2.1
SSSCA1O60232 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC1.93□□□□□ -2.1
SSSCA1O60232 AC119674.1-212ENST00000641155 993 ntBASIC1.93□□□□□ -2.1
SSSCA1O60232 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC1.93□□□□□ -2.1
SSSCA1O60232 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
SSSCA1O60232 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC1.92□□□□□ -2.1
SSSCA1O60232 AC069528.2-201ENST00000624849 1991 ntBASIC1.92□□□□□ -2.1
SSSCA1O60232 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC1.92□□□□□ -2.1
SSSCA1O60232 SNORA67.1-201ENST00000364749 141 ntBASIC1.92□□□□□ -2.1
SSSCA1O60232 RNU6-1181P-201ENST00000384191 106 ntBASIC1.92□□□□□ -2.1
SSSCA1O60232 RNU6ATAC10P-201ENST00000408635 111 ntBASIC1.92□□□□□ -2.1
SSSCA1O60232 RPS3AP25-201ENST00000411660 793 ntBASIC1.92□□□□□ -2.1
SSSCA1O60232 RABEPKP1-201ENST00000440529 1026 ntBASIC1.92□□□□□ -2.1
SSSCA1O60232 RSL24D1P3-201ENST00000449255 495 ntBASIC1.92□□□□□ -2.1
SSSCA1O60232 GAPDHP39-201ENST00000481866 979 ntBASIC1.92□□□□□ -2.1
SSSCA1O60232 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC1.92□□□□□ -2.1
SSSCA1O60232 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC1.92□□□□□ -2.1
SSSCA1O60232 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC1.92□□□□□ -2.1
SSSCA1O60232 XKRY-201ENST00000510392 1100 ntBASIC1.92□□□□□ -2.1
SSSCA1O60232 AC008716.1-201ENST00000511084 513 ntBASIC1.92□□□□□ -2.1
SSSCA1O60232 AC087808.1-201ENST00000520501 361 ntBASIC1.92□□□□□ -2.1
SSSCA1O60232 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
SSSCA1O60232 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC1.92□□□□□ -2.1
SSSCA1O60232 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC1.92□□□□□ -2.1
SSSCA1O60232 AL109618.2-201ENST00000605527 211 ntBASIC1.92□□□□□ -2.1
SSSCA1O60232 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC1.92□□□□□ -2.1
SSSCA1O60232 MIR6895-201ENST00000613497 78 ntBASIC1.92□□□□□ -2.1
SSSCA1O60232 AC245389.2-201ENST00000616023 576 ntBASIC1.92□□□□□ -2.1
SSSCA1O60232 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC1.92□□□□□ -2.1
SSSCA1O60232 AC243756.2-201ENST00000618406 463 ntBASIC1.92□□□□□ -2.1
SSSCA1O60232 AC242843.1-201ENST00000618702 573 ntBASIC1.92□□□□□ -2.1
SSSCA1O60232 AC244100.1-202ENST00000621554 382 ntBASIC1.92□□□□□ -2.1
SSSCA1O60232 AC103798.2-201ENST00000624292 632 ntBASIC1.92□□□□□ -2.1
SSSCA1O60232 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC1.92□□□□□ -2.1
SSSCA1O60232 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
SSSCA1O60232 PABPC1P7-201ENST00000413177 1513 ntBASIC1.91□□□□□ -2.1
SSSCA1O60232 AC244517.1-201ENST00000606030 2086 ntBASIC1.91□□□□□ -2.1
SSSCA1O60232 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
SSSCA1O60232 MIR34B-201ENST00000385076 84 ntBASIC1.91□□□□□ -2.1
SSSCA1O60232 AL360182.1-201ENST00000397433 468 ntBASIC1.91□□□□□ -2.1
SSSCA1O60232 RNA5SP38-201ENST00000410750 119 ntBASIC1.91□□□□□ -2.1
SSSCA1O60232 AL731575.1-201ENST00000413564 418 ntTSL 2 BASIC1.91□□□□□ -2.1
SSSCA1O60232 AL137014.1-201ENST00000420490 1226 ntBASIC1.91□□□□□ -2.1
SSSCA1O60232 OR51AB1P-201ENST00000429046 620 ntBASIC1.91□□□□□ -2.1
SSSCA1O60232 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
SSSCA1O60232 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC1.91□□□□□ -2.1
SSSCA1O60232 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC1.91□□□□□ -2.1
SSSCA1O60232 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC1.91□□□□□ -2.1
SSSCA1O60232 NANOGNBP1-201ENST00000448444 480 ntBASIC1.91□□□□□ -2.1
SSSCA1O60232 RPL23AP15-201ENST00000450202 459 ntBASIC1.91□□□□□ -2.1
SSSCA1O60232 MTND2P8-201ENST00000450555 1025 ntBASIC1.91□□□□□ -2.1
SSSCA1O60232 AL121584.1-201ENST00000453972 519 ntTSL 3 BASIC1.91□□□□□ -2.1
SSSCA1O60232 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC1.91□□□□□ -2.1
SSSCA1O60232 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC1.91□□□□□ -2.1
SSSCA1O60232 SNORA84-201ENST00000459229 133 ntBASIC1.91□□□□□ -2.1
SSSCA1O60232 AC109992.2-201ENST00000460977 765 ntTSL 3 BASIC1.91□□□□□ -2.1
SSSCA1O60232 MTND3P6-201ENST00000485242 339 ntBASIC1.91□□□□□ -2.1
SSSCA1O60232 AC135721.1-201ENST00000497954 479 ntBASIC1.91□□□□□ -2.1
SSSCA1O60232 MTND3P24-201ENST00000506306 329 ntBASIC1.91□□□□□ -2.1
SSSCA1O60232 RN7SKP24-201ENST00000515888 284 ntBASIC1.91□□□□□ -2.1
SSSCA1O60232 RNU6ATAC9P-201ENST00000516210 116 ntBASIC1.91□□□□□ -2.1
SSSCA1O60232 RNU1-104P-201ENST00000517280 175 ntBASIC1.91□□□□□ -2.1
SSSCA1O60232 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC1.91□□□□□ -2.1
SSSCA1O60232 AP003385.6-201ENST00000531603 374 ntBASIC1.91□□□□□ -2.1
SSSCA1O60232 AP000889.2-201ENST00000532684 490 ntBASIC1.91□□□□□ -2.1
SSSCA1O60232 AP001029.3-201ENST00000588063 596 ntBASIC1.91□□□□□ -2.1
SSSCA1O60232 NUTF2P8-201ENST00000604593 363 ntBASIC1.91□□□□□ -2.1
SSSCA1O60232 AP004607.9-201ENST00000618202 316 ntBASIC1.91□□□□□ -2.1
SSSCA1O60232 AC092159.4-201ENST00000624944 550 ntBASIC1.91□□□□□ -2.1
SSSCA1O60232 ZNF734P-201ENST00000419494 1534 ntBASIC1.91□□□□□ -2.1
SSSCA1O60232 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC1.91□□□□□ -2.1
SSSCA1O60232 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.1
SSSCA1O60232 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC1.9□□□□□ -2.1
SSSCA1O60232 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC1.9□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 115.6 ms