Protein–RNA interactions for Protein: O43679

LDB2, LIM domain-binding protein 2, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2O43679 USP9YP14-201ENST00000430663 563 ntBASIC3.97□□□□□ -1.77
LDB2O43679 KCTD9P3-201ENST00000434597 1169 ntBASIC3.97□□□□□ -1.77
LDB2O43679 AC105402.2-201ENST00000438503 358 ntBASIC3.97□□□□□ -1.77
LDB2O43679 HMGB1P37-201ENST00000439613 609 ntBASIC3.97□□□□□ -1.77
LDB2O43679 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC3.97□□□□□ -1.77
LDB2O43679 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC3.97□□□□□ -1.77
LDB2O43679 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC3.97□□□□□ -1.77
LDB2O43679 AL162151.2-201ENST00000448875 158 ntBASIC3.97□□□□□ -1.77
LDB2O43679 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC3.97□□□□□ -1.77
LDB2O43679 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC3.97□□□□□ -1.77
LDB2O43679 HMGB3P22-202ENST00000451823 572 ntBASIC3.97□□□□□ -1.77
LDB2O43679 RNU7-136P-201ENST00000458819 69 ntBASIC3.97□□□□□ -1.77
LDB2O43679 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC3.97□□□□□ -1.77
LDB2O43679 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC3.97□□□□□ -1.77
LDB2O43679 TMEM251P1-201ENST00000503717 318 ntBASIC3.97□□□□□ -1.77
LDB2O43679 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
LDB2O43679 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC3.97□□□□□ -1.77
LDB2O43679 AC104986.1-201ENST00000517978 436 ntBASIC3.97□□□□□ -1.77
LDB2O43679 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC3.97□□□□□ -1.77
LDB2O43679 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC3.97□□□□□ -1.77
LDB2O43679 AL133457.1-201ENST00000564251 987 ntBASIC3.97□□□□□ -1.77
LDB2O43679 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC3.97□□□□□ -1.77
LDB2O43679 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC3.97□□□□□ -1.77
LDB2O43679 IGKV1OR2-118-201ENST00000603238 347 ntBASIC3.97□□□□□ -1.77
LDB2O43679 AC112187.2-201ENST00000604345 283 ntBASIC3.97□□□□□ -1.77
LDB2O43679 AL021997.1-201ENST00000605757 193 ntBASIC3.97□□□□□ -1.77
LDB2O43679 AC087241.4-201ENST00000612441 480 ntBASIC3.97□□□□□ -1.77
LDB2O43679 MESTIT1_2.1-201ENST00000616328 235 ntBASIC3.97□□□□□ -1.77
LDB2O43679 AC018755.4-201ENST00000619715 454 ntBASIC3.97□□□□□ -1.77
LDB2O43679 MIR6715B-201ENST00000637172 77 ntBASIC3.97□□□□□ -1.77
LDB2O43679 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC3.97□□□□□ -1.77
LDB2O43679 AC011978.2-201ENST00000569835 2054 ntBASIC3.97□□□□□ -1.77
LDB2O43679 KPNA2P2-201ENST00000419546 1489 ntBASIC3.97□□□□□ -1.77
LDB2O43679 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
LDB2O43679 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
LDB2O43679 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC3.97□□□□□ -1.77
LDB2O43679 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.77
LDB2O43679 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC3.96□□□□□ -1.78
LDB2O43679 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC3.96□□□□□ -1.78
LDB2O43679 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
LDB2O43679 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
LDB2O43679 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
LDB2O43679 RNU6-1279P-201ENST00000383917 103 ntBASIC3.96□□□□□ -1.78
LDB2O43679 LAP3P1-201ENST00000403648 294 ntBASIC3.96□□□□□ -1.78
LDB2O43679 MTCYBP36-201ENST00000404146 440 ntBASIC3.96□□□□□ -1.78
LDB2O43679 RPL21P65-201ENST00000406094 466 ntBASIC3.96□□□□□ -1.78
LDB2O43679 RNU4-6P-201ENST00000410804 122 ntBASIC3.96□□□□□ -1.78
LDB2O43679 AC109780.2-201ENST00000413467 845 ntBASIC3.96□□□□□ -1.78
LDB2O43679 RPL7AP73-201ENST00000413490 353 ntBASIC3.96□□□□□ -1.78
LDB2O43679 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC3.96□□□□□ -1.78
LDB2O43679 RPL21P32-201ENST00000419877 477 ntBASIC3.96□□□□□ -1.78
LDB2O43679 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC3.96□□□□□ -1.78
LDB2O43679 RWDD4P2-201ENST00000426392 563 ntBASIC3.96□□□□□ -1.78
LDB2O43679 AL691449.1-201ENST00000426570 421 ntBASIC3.96□□□□□ -1.78
LDB2O43679 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC3.96□□□□□ -1.78
LDB2O43679 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC3.96□□□□□ -1.78
LDB2O43679 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC3.96□□□□□ -1.78
LDB2O43679 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC3.96□□□□□ -1.78
LDB2O43679 MTCO1P27-201ENST00000448269 226 ntBASIC3.96□□□□□ -1.78
LDB2O43679 AC133473.1-201ENST00000455173 299 ntBASIC3.96□□□□□ -1.78
LDB2O43679 snoU13.7-201ENST00000459220 104 ntBASIC3.96□□□□□ -1.78
LDB2O43679 RPL23AP2-201ENST00000471227 466 ntBASIC3.96□□□□□ -1.78
LDB2O43679 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
LDB2O43679 AC007537.2-201ENST00000472093 511 ntBASIC3.96□□□□□ -1.78
LDB2O43679 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
LDB2O43679 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC3.96□□□□□ -1.78
LDB2O43679 RNU6-405P-201ENST00000516637 110 ntBASIC3.96□□□□□ -1.78
LDB2O43679 RNA5SP179-201ENST00000517284 121 ntBASIC3.96□□□□□ -1.78
LDB2O43679 IGKV3OR22-2-201ENST00000517943 313 ntBASIC3.96□□□□□ -1.78
LDB2O43679 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC3.96□□□□□ -1.78
LDB2O43679 AC087369.1-201ENST00000520775 996 ntBASIC3.96□□□□□ -1.78
LDB2O43679 DEFB109D-201ENST00000529497 240 ntBASIC3.96□□□□□ -1.78
LDB2O43679 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC3.96□□□□□ -1.78
LDB2O43679 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC3.96□□□□□ -1.78
LDB2O43679 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC3.96□□□□□ -1.78
LDB2O43679 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC3.96□□□□□ -1.78
LDB2O43679 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC3.96□□□□□ -1.78
LDB2O43679 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC3.96□□□□□ -1.78
LDB2O43679 AC010546.1-201ENST00000569391 485 ntBASIC3.96□□□□□ -1.78
LDB2O43679 EIF1P4-201ENST00000572664 335 ntBASIC3.96□□□□□ -1.78
LDB2O43679 LARP7P2-201ENST00000575306 125 ntBASIC3.96□□□□□ -1.78
LDB2O43679 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC3.96□□□□□ -1.78
LDB2O43679 MAGOH2P-202ENST00000584384 429 ntBASIC3.96□□□□□ -1.78
LDB2O43679 MIR548AB-201ENST00000584917 84 ntBASIC3.96□□□□□ -1.78
LDB2O43679 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC3.96□□□□□ -1.78
LDB2O43679 AC073648.5-201ENST00000603502 305 ntBASIC3.96□□□□□ -1.78
LDB2O43679 AC091167.4-201ENST00000605079 184 ntBASIC3.96□□□□□ -1.78
LDB2O43679 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC3.96□□□□□ -1.78
LDB2O43679 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC3.96□□□□□ -1.78
LDB2O43679 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC3.96□□□□□ -1.78
LDB2O43679 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
LDB2O43679 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC3.96□□□□□ -1.78
LDB2O43679 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC3.96□□□□□ -1.78
LDB2O43679 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
LDB2O43679 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
LDB2O43679 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC3.96□□□□□ -1.78
LDB2O43679 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
LDB2O43679 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC3.96□□□□□ -1.78
LDB2O43679 UBE3AP2-201ENST00000429033 2259 ntBASIC3.96□□□□□ -1.78
LDB2O43679 SAGE4P-201ENST00000442271 3381 ntBASIC3.96□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 109.8 ms