Protein–RNA interactions for Protein: O43490

PROM1, Prominin-1, humanhuman

Predictions only

Length 865 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1O43490 RPEP2-201ENST00000432149 701 ntBASIC4.4□□□□□ -1.71
PROM1O43490 AC002486.1-201ENST00000435098 391 ntBASIC4.4□□□□□ -1.71
PROM1O43490 RPL17P49-201ENST00000443728 411 ntBASIC4.4□□□□□ -1.71
PROM1O43490 RPL36AP15-201ENST00000444514 266 ntBASIC4.4□□□□□ -1.71
PROM1O43490 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC4.4□□□□□ -1.71
PROM1O43490 AC079448.1-201ENST00000449377 373 ntBASIC4.4□□□□□ -1.71
PROM1O43490 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC4.4□□□□□ -1.71
PROM1O43490 RPL31P50-201ENST00000471002 296 ntBASIC4.4□□□□□ -1.71
PROM1O43490 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
PROM1O43490 RBM43P1-201ENST00000476891 1081 ntBASIC4.4□□□□□ -1.71
PROM1O43490 RPL21P103-201ENST00000479921 488 ntBASIC4.4□□□□□ -1.71
PROM1O43490 ARL4AP2-201ENST00000507378 601 ntBASIC4.4□□□□□ -1.71
PROM1O43490 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC4.4□□□□□ -1.71
PROM1O43490 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC4.4□□□□□ -1.71
PROM1O43490 AC018797.3-201ENST00000513388 1241 ntBASIC4.4□□□□□ -1.71
PROM1O43490 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC4.4□□□□□ -1.71
PROM1O43490 RNU6-507P-201ENST00000516045 100 ntBASIC4.4□□□□□ -1.71
PROM1O43490 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC4.4□□□□□ -1.71
PROM1O43490 COX6CP8-201ENST00000522620 226 ntBASIC4.4□□□□□ -1.71
PROM1O43490 CARD16-203ENST00000525374 503 ntTSL 3 BASIC4.4□□□□□ -1.71
PROM1O43490 AP003122.4-201ENST00000530980 758 ntBASIC4.4□□□□□ -1.71
PROM1O43490 PTP4A1P6-201ENST00000531034 478 ntBASIC4.4□□□□□ -1.71
PROM1O43490 AC015912.2-201ENST00000571053 181 ntBASIC4.4□□□□□ -1.71
PROM1O43490 AC136624.4-201ENST00000573044 370 ntBASIC4.4□□□□□ -1.71
PROM1O43490 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC4.4□□□□□ -1.71
PROM1O43490 MIR5096-201ENST00000583713 70 ntBASIC4.4□□□□□ -1.71
PROM1O43490 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
PROM1O43490 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC4.4□□□□□ -1.71
PROM1O43490 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC4.4□□□□□ -1.71
PROM1O43490 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC4.4□□□□□ -1.71
PROM1O43490 AC008277.2-201ENST00000605196 797 ntBASIC4.4□□□□□ -1.71
PROM1O43490 COX6CP4-201ENST00000605798 228 ntBASIC4.4□□□□□ -1.71
PROM1O43490 AL161734.1-201ENST00000609720 557 ntBASIC4.4□□□□□ -1.71
PROM1O43490 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
PROM1O43490 AL732618.1-201ENST00000623251 301 ntBASIC4.4□□□□□ -1.71
PROM1O43490 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
PROM1O43490 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
PROM1O43490 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
PROM1O43490 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
PROM1O43490 CASC19-280ENST00000642102 1351 ntBASIC4.4□□□□□ -1.71
PROM1O43490 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.39□□□□□ -1.71
PROM1O43490 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC4.39□□□□□ -1.71
PROM1O43490 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.39□□□□□ -1.71
PROM1O43490 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
PROM1O43490 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
PROM1O43490 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
PROM1O43490 AL590240.1-201ENST00000334118 313 ntBASIC4.39□□□□□ -1.71
PROM1O43490 Y_RNA.1-201ENST00000352915 104 ntBASIC4.39□□□□□ -1.71
PROM1O43490 RNU1-108P-201ENST00000362556 161 ntBASIC4.39□□□□□ -1.71
PROM1O43490 Y_RNA.295-201ENST00000364918 102 ntBASIC4.39□□□□□ -1.71
PROM1O43490 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
PROM1O43490 ARF4P3-201ENST00000397387 509 ntBASIC4.39□□□□□ -1.71
PROM1O43490 RPS20P2-201ENST00000402520 389 ntBASIC4.39□□□□□ -1.71
PROM1O43490 Z98745.1-201ENST00000402553 494 ntBASIC4.39□□□□□ -1.71
PROM1O43490 FGF7P8-201ENST00000402994 292 ntBASIC4.39□□□□□ -1.71
PROM1O43490 VDAC1P9-201ENST00000412766 841 ntBASIC4.39□□□□□ -1.71
PROM1O43490 RPS3AP9-201ENST00000417027 792 ntBASIC4.39□□□□□ -1.71
PROM1O43490 USP9YP27-201ENST00000418455 438 ntBASIC4.39□□□□□ -1.71
PROM1O43490 RPS12P23-201ENST00000419579 400 ntBASIC4.39□□□□□ -1.71
PROM1O43490 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC4.39□□□□□ -1.71
PROM1O43490 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC4.39□□□□□ -1.71
PROM1O43490 MTCO1P20-201ENST00000425366 358 ntBASIC4.39□□□□□ -1.71
PROM1O43490 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC4.39□□□□□ -1.71
PROM1O43490 RPL31P35-201ENST00000431058 377 ntBASIC4.39□□□□□ -1.71
PROM1O43490 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC4.39□□□□□ -1.71
PROM1O43490 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC4.39□□□□□ -1.71
PROM1O43490 AC114755.5-201ENST00000447760 831 ntBASIC4.39□□□□□ -1.71
PROM1O43490 AP000542.1-201ENST00000448473 371 ntBASIC4.39□□□□□ -1.71
PROM1O43490 C1DP4-201ENST00000455429 424 ntBASIC4.39□□□□□ -1.71
PROM1O43490 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC4.39□□□□□ -1.71
PROM1O43490 snoU13.1-201ENST00000459157 104 ntBASIC4.39□□□□□ -1.71
PROM1O43490 RPL38P1-201ENST00000460914 211 ntBASIC4.39□□□□□ -1.71
PROM1O43490 AC006967.1-201ENST00000467608 589 ntBASIC4.39□□□□□ -1.71
PROM1O43490 AC007182.2-201ENST00000489251 402 ntBASIC4.39□□□□□ -1.71
PROM1O43490 AC026979.1-201ENST00000492525 396 ntBASIC4.39□□□□□ -1.71
PROM1O43490 RPL36AP41-201ENST00000493820 306 ntBASIC4.39□□□□□ -1.71
PROM1O43490 AC008628.2-201ENST00000502605 298 ntBASIC4.39□□□□□ -1.71
PROM1O43490 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC4.39□□□□□ -1.71
PROM1O43490 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC4.39□□□□□ -1.71
PROM1O43490 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC4.39□□□□□ -1.71
PROM1O43490 RNA5SP497-201ENST00000516081 97 ntBASIC4.39□□□□□ -1.71
PROM1O43490 MYL12AP1-201ENST00000518490 515 ntBASIC4.39□□□□□ -1.71
PROM1O43490 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC4.39□□□□□ -1.71
PROM1O43490 AC022861.1-201ENST00000522981 663 ntBASIC4.39□□□□□ -1.71
PROM1O43490 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC4.39□□□□□ -1.71
PROM1O43490 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC4.39□□□□□ -1.71
PROM1O43490 OR4R3P-201ENST00000525084 838 ntBASIC4.39□□□□□ -1.71
PROM1O43490 AC109635.3-201ENST00000529536 185 ntBASIC4.39□□□□□ -1.71
PROM1O43490 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.39□□□□□ -1.71
PROM1O43490 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC4.39□□□□□ -1.71
PROM1O43490 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC4.39□□□□□ -1.71
PROM1O43490 MIR4504-201ENST00000577413 92 ntBASIC4.39□□□□□ -1.71
PROM1O43490 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC4.39□□□□□ -1.71
PROM1O43490 AC073091.2-201ENST00000603205 907 ntBASIC4.39□□□□□ -1.71
PROM1O43490 AC245014.2-201ENST00000603689 287 ntBASIC4.39□□□□□ -1.71
PROM1O43490 AL353621.2-201ENST00000605340 133 ntBASIC4.39□□□□□ -1.71
PROM1O43490 AC246785.4-201ENST00000605374 287 ntBASIC4.39□□□□□ -1.71
PROM1O43490 ACTR3BP1-201ENST00000605584 1247 ntBASIC4.39□□□□□ -1.71
PROM1O43490 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC4.39□□□□□ -1.71
PROM1O43490 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC4.39□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 109.2 ms