Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
TRIM38O00635 DCAF13P1-201ENST00000495256 1330 ntBASIC4.44□□□□□ -1.7
TRIM38O00635 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
TRIM38O00635 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
TRIM38O00635 AC018529.3-201ENST00000624212 2254 ntBASIC4.43□□□□□ -1.7
TRIM38O00635 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC4.43□□□□□ -1.7
TRIM38O00635 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
TRIM38O00635 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
TRIM38O00635 AL121657.1-201ENST00000327215 531 ntBASIC4.43□□□□□ -1.7
TRIM38O00635 Y_RNA.11-201ENST00000362375 109 ntBASIC4.43□□□□□ -1.7
TRIM38O00635 RNA5SP388-201ENST00000362584 119 ntBASIC4.43□□□□□ -1.7
TRIM38O00635 Y_RNA.70-201ENST00000362886 110 ntBASIC4.43□□□□□ -1.7
TRIM38O00635 SNORD51-201ENST00000384320 80 ntBASIC4.43□□□□□ -1.7
TRIM38O00635 SNORA37-201ENST00000384504 129 ntBASIC4.43□□□□□ -1.7
TRIM38O00635 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
TRIM38O00635 SDHCP2-201ENST00000398565 501 ntBASIC4.43□□□□□ -1.7
TRIM38O00635 LAP3P1-201ENST00000403648 294 ntBASIC4.43□□□□□ -1.7
TRIM38O00635 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC4.43□□□□□ -1.7
TRIM38O00635 RPS12P10-201ENST00000427031 377 ntBASIC4.43□□□□□ -1.7
TRIM38O00635 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC4.43□□□□□ -1.7
TRIM38O00635 PSMA6P3-201ENST00000428242 164 ntBASIC4.43□□□□□ -1.7
TRIM38O00635 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC4.43□□□□□ -1.7
TRIM38O00635 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC4.43□□□□□ -1.7
TRIM38O00635 AC239367.2-201ENST00000447309 705 ntBASIC4.43□□□□□ -1.7
TRIM38O00635 MTCO1P27-201ENST00000448269 226 ntBASIC4.43□□□□□ -1.7
TRIM38O00635 AC005297.2-201ENST00000450430 606 ntBASIC4.43□□□□□ -1.7
TRIM38O00635 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC4.43□□□□□ -1.7
TRIM38O00635 RN7SL98P-201ENST00000462271 300 ntBASIC4.43□□□□□ -1.7
TRIM38O00635 AC007537.2-201ENST00000472093 511 ntBASIC4.43□□□□□ -1.7
TRIM38O00635 AC012170.1-201ENST00000495139 359 ntBASIC4.43□□□□□ -1.7
TRIM38O00635 DSTNP2-201ENST00000504533 515 ntBASIC4.43□□□□□ -1.7
TRIM38O00635 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC4.43□□□□□ -1.7
TRIM38O00635 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC4.43□□□□□ -1.7
TRIM38O00635 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC4.43□□□□□ -1.7
TRIM38O00635 AC116347.2-201ENST00000514912 523 ntBASIC4.43□□□□□ -1.7
TRIM38O00635 RNU6-405P-201ENST00000516637 110 ntBASIC4.43□□□□□ -1.7
TRIM38O00635 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC4.43□□□□□ -1.7
TRIM38O00635 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC4.43□□□□□ -1.7
TRIM38O00635 OR6C7P-201ENST00000547875 934 ntBASIC4.43□□□□□ -1.7
TRIM38O00635 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC4.43□□□□□ -1.7
TRIM38O00635 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC4.43□□□□□ -1.7
TRIM38O00635 AC025884.1-201ENST00000556034 378 ntBASIC4.43□□□□□ -1.7
TRIM38O00635 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC4.43□□□□□ -1.7
TRIM38O00635 AP001004.1-201ENST00000582468 324 ntBASIC4.43□□□□□ -1.7
TRIM38O00635 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC4.43□□□□□ -1.7
TRIM38O00635 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
TRIM38O00635 AL353997.4-201ENST00000586196 166 ntBASIC4.43□□□□□ -1.7
TRIM38O00635 IPO5P1-202ENST00000600039 287 ntBASIC4.43□□□□□ -1.7
TRIM38O00635 U73023.1-201ENST00000603134 700 ntBASIC4.43□□□□□ -1.7
TRIM38O00635 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC4.43□□□□□ -1.7
TRIM38O00635 OR6R2P-201ENST00000609216 300 ntBASIC4.43□□□□□ -1.7
TRIM38O00635 AC006329.2-201ENST00000611491 394 ntBASIC4.43□□□□□ -1.7
TRIM38O00635 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC4.43□□□□□ -1.7
TRIM38O00635 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC4.43□□□□□ -1.7
TRIM38O00635 ZYXP1-201ENST00000617638 118 ntBASIC4.43□□□□□ -1.7
TRIM38O00635 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC4.43□□□□□ -1.7
TRIM38O00635 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC4.43□□□□□ -1.7
TRIM38O00635 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
TRIM38O00635 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.43□□□□□ -1.7
TRIM38O00635 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
TRIM38O00635 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
TRIM38O00635 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.43□□□□□ -1.7
TRIM38O00635 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
TRIM38O00635 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
TRIM38O00635 NOL8P1-201ENST00000508336 3529 ntBASIC4.43□□□□□ -1.7
TRIM38O00635 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
TRIM38O00635 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
TRIM38O00635 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC4.43□□□□□ -1.7
TRIM38O00635 AL391684.1-202ENST00000641293 1636 ntBASIC4.43□□□□□ -1.7
TRIM38O00635 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
TRIM38O00635 OR4G2P-201ENST00000328113 903 ntBASIC4.42□□□□□ -1.7
TRIM38O00635 AC067945.1-201ENST00000342609 618 ntBASIC4.42□□□□□ -1.7
TRIM38O00635 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC4.42□□□□□ -1.7
TRIM38O00635 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
TRIM38O00635 MIR708-201ENST00000390708 88 ntBASIC4.42□□□□□ -1.7
TRIM38O00635 RNU2-66P-201ENST00000410650 161 ntBASIC4.42□□□□□ -1.7
TRIM38O00635 RNU2-15P-201ENST00000410692 191 ntBASIC4.42□□□□□ -1.7
TRIM38O00635 RNU6-920P-201ENST00000410926 92 ntBASIC4.42□□□□□ -1.7
TRIM38O00635 AL590233.1-201ENST00000430017 456 ntBASIC4.42□□□□□ -1.7
TRIM38O00635 AC011998.1-201ENST00000433403 117 ntBASIC4.42□□□□□ -1.7
TRIM38O00635 MRPS18BP2-201ENST00000434310 759 ntBASIC4.42□□□□□ -1.7
TRIM38O00635 RPS3AP54-201ENST00000435535 734 ntBASIC4.42□□□□□ -1.7
TRIM38O00635 AC069285.2-201ENST00000440210 275 ntBASIC4.42□□□□□ -1.7
TRIM38O00635 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC4.42□□□□□ -1.7
TRIM38O00635 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC4.42□□□□□ -1.7
TRIM38O00635 CFTRP1-201ENST00000456646 183 ntBASIC4.42□□□□□ -1.7
TRIM38O00635 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC4.42□□□□□ -1.7
TRIM38O00635 FPGT-203ENST00000467578 601 ntTSL 2 BASIC4.42□□□□□ -1.7
TRIM38O00635 CREM-230ENST00000474931 626 ntTSL 2 BASIC4.42□□□□□ -1.7
TRIM38O00635 AC105137.1-201ENST00000484355 562 ntBASIC4.42□□□□□ -1.7
TRIM38O00635 AC091167.1-201ENST00000492017 396 ntBASIC4.42□□□□□ -1.7
TRIM38O00635 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
TRIM38O00635 PRDX4P1-201ENST00000507189 574 ntBASIC4.42□□□□□ -1.7
TRIM38O00635 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC4.42□□□□□ -1.7
TRIM38O00635 AC106038.2-201ENST00000520706 568 ntBASIC4.42□□□□□ -1.7
TRIM38O00635 MRPL49P2-201ENST00000521066 465 ntBASIC4.42□□□□□ -1.7
TRIM38O00635 MED28P5-201ENST00000528254 438 ntBASIC4.42□□□□□ -1.7
TRIM38O00635 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC4.42□□□□□ -1.7
TRIM38O00635 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC4.42□□□□□ -1.7
TRIM38O00635 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC4.42□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 106.5 ms