Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC5.56□□□□□ -1.52
SOX1O00570 AC020893.1-201ENST00000502452 580 ntBASIC5.56□□□□□ -1.52
SOX1O00570 AC017037.2-201ENST00000513850 890 ntBASIC5.56□□□□□ -1.52
SOX1O00570 RNU6-976P-201ENST00000516086 111 ntBASIC5.56□□□□□ -1.52
SOX1O00570 RN7SKP276-201ENST00000516242 268 ntBASIC5.56□□□□□ -1.52
SOX1O00570 RNU6-264P-201ENST00000517134 104 ntBASIC5.56□□□□□ -1.52
SOX1O00570 RNA5SP454-201ENST00000517231 127 ntBASIC5.56□□□□□ -1.52
SOX1O00570 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC5.56□□□□□ -1.52
SOX1O00570 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC5.56□□□□□ -1.52
SOX1O00570 AC008269.2-201ENST00000561915 1105 ntBASIC5.56□□□□□ -1.52
SOX1O00570 MIR4680-201ENST00000580906 66 ntBASIC5.56□□□□□ -1.52
SOX1O00570 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC5.56□□□□□ -1.52
SOX1O00570 BNIP3P25-201ENST00000596023 559 ntBASIC5.56□□□□□ -1.52
SOX1O00570 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC5.56□□□□□ -1.52
SOX1O00570 AL157817.1-201ENST00000614264 790 ntBASIC5.56□□□□□ -1.52
SOX1O00570 AL049794.2-201ENST00000616301 365 ntBASIC5.56□□□□□ -1.52
SOX1O00570 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC5.56□□□□□ -1.52
SOX1O00570 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
SOX1O00570 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
SOX1O00570 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC5.56□□□□□ -1.52
SOX1O00570 NRK-204ENST00000540278 1687 ntTSL 2 BASIC5.56□□□□□ -1.52
SOX1O00570 TYW3-203ENST00000457880 3335 ntTSL 2 BASIC5.56□□□□□ -1.52
SOX1O00570 AL138713.1-201ENST00000624026 2130 ntBASIC5.56□□□□□ -1.52
SOX1O00570 LINC01981-201ENST00000432163 2833 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
SOX1O00570 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
SOX1O00570 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
SOX1O00570 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC5.55□□□□□ -1.52
SOX1O00570 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC5.55□□□□□ -1.52
SOX1O00570 ALKBH8-205ENST00000428149 4079 ntAPPRIS P3 TSL 1 (best) BASIC5.55□□□□□ -1.52
SOX1O00570 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC5.55□□□□□ -1.52
SOX1O00570 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC5.55□□□□□ -1.52
SOX1O00570 OBSCN-201ENST00000284548 20432 ntTSL 2 BASIC5.55□□□□□ -1.52
SOX1O00570 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
SOX1O00570 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
SOX1O00570 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
SOX1O00570 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC5.55□□□□□ -1.52
SOX1O00570 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
SOX1O00570 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC5.55□□□□□ -1.52
SOX1O00570 Y_RNA.167-201ENST00000363735 109 ntBASIC5.55□□□□□ -1.52
SOX1O00570 Y_RNA.212-201ENST00000364177 102 ntBASIC5.55□□□□□ -1.52
SOX1O00570 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC5.55□□□□□ -1.52
SOX1O00570 SNORA70F-201ENST00000384142 135 ntBASIC5.55□□□□□ -1.52
SOX1O00570 Y_RNA.482-201ENST00000384377 111 ntBASIC5.55□□□□□ -1.52
SOX1O00570 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
SOX1O00570 AC096921.1-201ENST00000411661 375 ntBASIC5.55□□□□□ -1.52
SOX1O00570 MRPS21P2-201ENST00000424704 264 ntBASIC5.55□□□□□ -1.52
SOX1O00570 TEX41-206ENST00000432608 661 ntTSL 3 BASIC5.55□□□□□ -1.52
SOX1O00570 RPL23AP83-201ENST00000434984 473 ntBASIC5.55□□□□□ -1.52
SOX1O00570 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC5.55□□□□□ -1.52
SOX1O00570 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC5.55□□□□□ -1.52
SOX1O00570 RPL21P89-201ENST00000444021 467 ntBASIC5.55□□□□□ -1.52
SOX1O00570 AL136126.1-201ENST00000473603 402 ntBASIC5.55□□□□□ -1.52
SOX1O00570 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC5.55□□□□□ -1.52
SOX1O00570 RN7SL319P-201ENST00000480656 221 ntBASIC5.55□□□□□ -1.52
SOX1O00570 RPS27P27-201ENST00000498779 255 ntBASIC5.55□□□□□ -1.52
SOX1O00570 RNA5SP116-201ENST00000516132 98 ntBASIC5.55□□□□□ -1.52
SOX1O00570 RNU6-347P-201ENST00000516658 105 ntBASIC5.55□□□□□ -1.52
SOX1O00570 HMGB1P19-201ENST00000517578 577 ntBASIC5.55□□□□□ -1.52
SOX1O00570 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC5.55□□□□□ -1.52
SOX1O00570 HMGB1P41-201ENST00000520234 440 ntBASIC5.55□□□□□ -1.52
SOX1O00570 DEFB109D-201ENST00000529497 240 ntBASIC5.55□□□□□ -1.52
SOX1O00570 AP000763.2-201ENST00000540641 163 ntBASIC5.55□□□□□ -1.52
SOX1O00570 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC5.55□□□□□ -1.52
SOX1O00570 COX6CP3-201ENST00000580869 223 ntBASIC5.55□□□□□ -1.52
SOX1O00570 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC5.55□□□□□ -1.52
SOX1O00570 AC105254.2-201ENST00000603636 436 ntBASIC5.55□□□□□ -1.52
SOX1O00570 AC005014.2-201ENST00000607795 599 ntBASIC5.55□□□□□ -1.52
SOX1O00570 SSX9-202ENST00000608568 580 ntTSL 4 BASIC5.55□□□□□ -1.52
SOX1O00570 Z82243.1-201ENST00000609432 473 ntBASIC5.55□□□□□ -1.52
SOX1O00570 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC5.55□□□□□ -1.52
SOX1O00570 U6.114-201ENST00000636407 96 ntBASIC5.55□□□□□ -1.52
SOX1O00570 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC5.55□□□□□ -1.52
SOX1O00570 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC5.55□□□□□ -1.52
SOX1O00570 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC5.55□□□□□ -1.52
SOX1O00570 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
SOX1O00570 FCHSD2-208ENST00000458644 2215 ntTSL 2 BASIC5.55□□□□□ -1.52
SOX1O00570 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
SOX1O00570 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC5.55□□□□□ -1.52
SOX1O00570 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
SOX1O00570 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
SOX1O00570 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
SOX1O00570 ASAH1-232ENST00000636691 2472 ntTSL 5 BASIC5.54□□□□□ -1.52
SOX1O00570 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
SOX1O00570 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
SOX1O00570 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC5.54□□□□□ -1.52
SOX1O00570 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
SOX1O00570 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
SOX1O00570 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
SOX1O00570 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
SOX1O00570 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC5.54□□□□□ -1.52
SOX1O00570 Y_RNA.149-201ENST00000363558 117 ntBASIC5.54□□□□□ -1.52
SOX1O00570 RNU6-82P-201ENST00000363970 107 ntBASIC5.54□□□□□ -1.52
SOX1O00570 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC5.54□□□□□ -1.52
SOX1O00570 RNU6-1226P-201ENST00000384317 107 ntBASIC5.54□□□□□ -1.52
SOX1O00570 AL139397.2-201ENST00000404529 772 ntBASIC5.54□□□□□ -1.52
SOX1O00570 AC015977.1-201ENST00000418887 292 ntBASIC5.54□□□□□ -1.52
SOX1O00570 AL590609.2-201ENST00000421430 368 ntBASIC5.54□□□□□ -1.52
SOX1O00570 USP9YP16-201ENST00000430287 407 ntBASIC5.54□□□□□ -1.52
SOX1O00570 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC5.54□□□□□ -1.52
SOX1O00570 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC5.54□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 84.9 ms