Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC3.69□□□□□ -1.82
CCDC188H7C350 RPL7P19-201ENST00000469948 618 ntBASIC3.69□□□□□ -1.82
CCDC188H7C350 VN1R17P-201ENST00000472048 1090 ntBASIC3.69□□□□□ -1.82
CCDC188H7C350 RN7SL442P-201ENST00000473804 320 ntBASIC3.69□□□□□ -1.82
CCDC188H7C350 RPS4XP13-201ENST00000483219 789 ntBASIC3.69□□□□□ -1.82
CCDC188H7C350 AP001086.1-201ENST00000494882 321 ntBASIC3.69□□□□□ -1.82
CCDC188H7C350 AC090453.1-201ENST00000495560 436 ntBASIC3.69□□□□□ -1.82
CCDC188H7C350 RPL7P47-201ENST00000497299 556 ntBASIC3.69□□□□□ -1.82
CCDC188H7C350 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC3.69□□□□□ -1.82
CCDC188H7C350 MIR2276-201ENST00000516886 89 ntBASIC3.69□□□□□ -1.82
CCDC188H7C350 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC3.69□□□□□ -1.82
CCDC188H7C350 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
CCDC188H7C350 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC3.69□□□□□ -1.82
CCDC188H7C350 MTND4P33-201ENST00000556706 766 ntBASIC3.69□□□□□ -1.82
CCDC188H7C350 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC3.69□□□□□ -1.82
CCDC188H7C350 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC3.69□□□□□ -1.82
CCDC188H7C350 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC3.69□□□□□ -1.82
CCDC188H7C350 AC008507.1-201ENST00000587506 734 ntBASIC3.69□□□□□ -1.82
CCDC188H7C350 AC091057.2-201ENST00000602594 792 ntBASIC3.69□□□□□ -1.82
CCDC188H7C350 BBIP1P1-201ENST00000602999 279 ntBASIC3.69□□□□□ -1.82
CCDC188H7C350 AL606490.9-201ENST00000603331 271 ntBASIC3.69□□□□□ -1.82
CCDC188H7C350 AL158042.1-201ENST00000605338 460 ntBASIC3.69□□□□□ -1.82
CCDC188H7C350 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC3.69□□□□□ -1.82
CCDC188H7C350 AC245297.2-201ENST00000610119 565 ntBASIC3.69□□□□□ -1.82
CCDC188H7C350 AC025588.4-201ENST00000615802 908 ntBASIC3.69□□□□□ -1.82
CCDC188H7C350 GXYLT1P4-203ENST00000616580 641 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
CCDC188H7C350 AC006386.1-201ENST00000619436 415 ntBASIC3.69□□□□□ -1.82
CCDC188H7C350 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC3.69□□□□□ -1.82
CCDC188H7C350 AC091046.2-201ENST00000620775 665 ntBASIC3.69□□□□□ -1.82
CCDC188H7C350 AC068724.3-201ENST00000625906 87 ntBASIC3.69□□□□□ -1.82
CCDC188H7C350 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.69□□□□□ -1.82
CCDC188H7C350 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.69□□□□□ -1.82
CCDC188H7C350 AL513302.2-201ENST00000562313 1842 ntBASIC3.69□□□□□ -1.82
CCDC188H7C350 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
CCDC188H7C350 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.69□□□□□ -1.82
CCDC188H7C350 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
CCDC188H7C350 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
CCDC188H7C350 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
CCDC188H7C350 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
CCDC188H7C350 AC007496.3-201ENST00000624987 3443 ntBASIC3.68□□□□□ -1.82
CCDC188H7C350 AF127577.6-201ENST00000623352 2191 ntBASIC3.68□□□□□ -1.82
CCDC188H7C350 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
CCDC188H7C350 Y_RNA.126-201ENST00000363382 111 ntBASIC3.68□□□□□ -1.82
CCDC188H7C350 RNU6-805P-201ENST00000365643 106 ntBASIC3.68□□□□□ -1.82
CCDC188H7C350 CD2-201ENST00000369477 478 ntTSL 2 BASIC3.68□□□□□ -1.82
CCDC188H7C350 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC3.68□□□□□ -1.82
CCDC188H7C350 RNA5SP129-201ENST00000410276 118 ntBASIC3.68□□□□□ -1.82
CCDC188H7C350 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC3.68□□□□□ -1.82
CCDC188H7C350 AC245052.5-201ENST00000416320 649 ntBASIC3.68□□□□□ -1.82
CCDC188H7C350 PTP4A1P5-201ENST00000420305 455 ntBASIC3.68□□□□□ -1.82
CCDC188H7C350 AL159169.1-201ENST00000421119 127 ntBASIC3.68□□□□□ -1.82
CCDC188H7C350 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC3.68□□□□□ -1.82
CCDC188H7C350 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC3.68□□□□□ -1.82
CCDC188H7C350 GAS5-208ENST00000425771 242 ntTSL 3 BASIC3.68□□□□□ -1.82
CCDC188H7C350 RPL23AP82-202ENST00000427528 469 ntBASIC3.68□□□□□ -1.82
CCDC188H7C350 RPS25P9-201ENST00000435591 252 ntBASIC3.68□□□□□ -1.82
CCDC188H7C350 CR769776.1-201ENST00000441254 787 ntBASIC3.68□□□□□ -1.82
CCDC188H7C350 FGF7P5-201ENST00000441829 291 ntBASIC3.68□□□□□ -1.82
CCDC188H7C350 AL162151.2-201ENST00000448875 158 ntBASIC3.68□□□□□ -1.82
CCDC188H7C350 HMGB3P8-201ENST00000449709 577 ntBASIC3.68□□□□□ -1.82
CCDC188H7C350 RPL26P28-201ENST00000451325 435 ntBASIC3.68□□□□□ -1.82
CCDC188H7C350 RPS24P6-201ENST00000452670 400 ntBASIC3.68□□□□□ -1.82
CCDC188H7C350 TRGVB-201ENST00000453257 471 ntBASIC3.68□□□□□ -1.82
CCDC188H7C350 SUMO2P2-201ENST00000456482 255 ntBASIC3.68□□□□□ -1.82
CCDC188H7C350 snoU109.4-201ENST00000458953 143 ntBASIC3.68□□□□□ -1.82
CCDC188H7C350 snoU13.24-201ENST00000458998 104 ntBASIC3.68□□□□□ -1.82
CCDC188H7C350 CENPBD1P1-201ENST00000464061 469 ntBASIC3.68□□□□□ -1.82
CCDC188H7C350 RPL23AP67-201ENST00000465341 474 ntBASIC3.68□□□□□ -1.82
CCDC188H7C350 AC020898.1-201ENST00000474167 787 ntBASIC3.68□□□□□ -1.82
CCDC188H7C350 RPL7P38-201ENST00000488396 739 ntBASIC3.68□□□□□ -1.82
CCDC188H7C350 AC020699.1-201ENST00000505161 445 ntBASIC3.68□□□□□ -1.82
CCDC188H7C350 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC3.68□□□□□ -1.82
CCDC188H7C350 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC3.68□□□□□ -1.82
CCDC188H7C350 NDUFB4P9-201ENST00000511646 388 ntBASIC3.68□□□□□ -1.82
CCDC188H7C350 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC3.68□□□□□ -1.82
CCDC188H7C350 RNU6-150P-201ENST00000516237 95 ntBASIC3.68□□□□□ -1.82
CCDC188H7C350 RN7SKP289-201ENST00000517244 295 ntBASIC3.68□□□□□ -1.82
CCDC188H7C350 MTND2P32-201ENST00000521584 1038 ntBASIC3.68□□□□□ -1.82
CCDC188H7C350 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC3.68□□□□□ -1.82
CCDC188H7C350 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.68□□□□□ -1.82
CCDC188H7C350 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC3.68□□□□□ -1.82
CCDC188H7C350 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC3.68□□□□□ -1.82
CCDC188H7C350 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC3.68□□□□□ -1.82
CCDC188H7C350 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC3.68□□□□□ -1.82
CCDC188H7C350 AL031176.1-201ENST00000604554 466 ntBASIC3.68□□□□□ -1.82
CCDC188H7C350 AC080013.3-201ENST00000606839 578 ntBASIC3.68□□□□□ -1.82
CCDC188H7C350 AP000240.1-201ENST00000609910 452 ntBASIC3.68□□□□□ -1.82
CCDC188H7C350 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC3.68□□□□□ -1.82
CCDC188H7C350 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
CCDC188H7C350 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.68□□□□□ -1.82
CCDC188H7C350 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.68□□□□□ -1.82
CCDC188H7C350 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
CCDC188H7C350 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.68□□□□□ -1.82
CCDC188H7C350 AC007823.1-201ENST00000569932 1566 ntBASIC3.68□□□□□ -1.82
CCDC188H7C350 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.68□□□□□ -1.82
CCDC188H7C350 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC3.68□□□□□ -1.82
CCDC188H7C350 AP004289.2-201ENST00000444413 1457 ntBASIC3.67□□□□□ -1.82
CCDC188H7C350 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC3.67□□□□□ -1.82
CCDC188H7C350 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
CCDC188H7C350 ANKRD62P1-201ENST00000434304 1623 ntBASIC3.67□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 98.7 ms