Protein–RNA interactions for Protein: Q9Y5H0

PCDHGA3, Protocadherin gamma-A3, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3Q9Y5H0 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
PCDHGA3Q9Y5H0 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.67
PCDHGA3Q9Y5H0 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
PCDHGA3Q9Y5H0 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC4.65□□□□□ -1.67
PCDHGA3Q9Y5H0 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC4.65□□□□□ -1.67
PCDHGA3Q9Y5H0 STK31-205ENST00000433467 3085 ntTSL 2 BASIC4.65□□□□□ -1.67
PCDHGA3Q9Y5H0 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC4.65□□□□□ -1.67
PCDHGA3Q9Y5H0 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
PCDHGA3Q9Y5H0 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.67
PCDHGA3Q9Y5H0 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.65□□□□□ -1.67
PCDHGA3Q9Y5H0 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC4.65□□□□□ -1.67
PCDHGA3Q9Y5H0 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
PCDHGA3Q9Y5H0 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
PCDHGA3Q9Y5H0 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
PCDHGA3Q9Y5H0 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC4.64□□□□□ -1.67
PCDHGA3Q9Y5H0 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
PCDHGA3Q9Y5H0 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC4.64□□□□□ -1.67
PCDHGA3Q9Y5H0 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
PCDHGA3Q9Y5H0 AC126755.2-208ENST00000327792 462 ntBASIC4.64□□□□□ -1.67
PCDHGA3Q9Y5H0 AC138969.1-213ENST00000331436 462 ntBASIC4.64□□□□□ -1.67
PCDHGA3Q9Y5H0 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
PCDHGA3Q9Y5H0 RNU6-1249P-201ENST00000363237 111 ntBASIC4.64□□□□□ -1.67
PCDHGA3Q9Y5H0 CRP-202ENST00000368110 667 ntTSL 3 BASIC4.64□□□□□ -1.67
PCDHGA3Q9Y5H0 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC4.64□□□□□ -1.67
PCDHGA3Q9Y5H0 SNORA70F-201ENST00000384142 135 ntBASIC4.64□□□□□ -1.67
PCDHGA3Q9Y5H0 AC127391.1-201ENST00000411737 98 ntBASIC4.64□□□□□ -1.67
PCDHGA3Q9Y5H0 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC4.64□□□□□ -1.67
PCDHGA3Q9Y5H0 BX295541.1-201ENST00000417774 250 ntBASIC4.64□□□□□ -1.67
PCDHGA3Q9Y5H0 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC4.64□□□□□ -1.67
PCDHGA3Q9Y5H0 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC4.64□□□□□ -1.67
PCDHGA3Q9Y5H0 AC016831.4-201ENST00000438302 307 ntBASIC4.64□□□□□ -1.67
PCDHGA3Q9Y5H0 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
PCDHGA3Q9Y5H0 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC4.64□□□□□ -1.67
PCDHGA3Q9Y5H0 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
PCDHGA3Q9Y5H0 AC234775.1-201ENST00000454247 670 ntBASIC4.64□□□□□ -1.67
PCDHGA3Q9Y5H0 MTND1P12-201ENST00000455231 147 ntBASIC4.64□□□□□ -1.67
PCDHGA3Q9Y5H0 AL359385.1-201ENST00000456509 365 ntBASIC4.64□□□□□ -1.67
PCDHGA3Q9Y5H0 RBM43P1-201ENST00000476891 1081 ntBASIC4.64□□□□□ -1.67
PCDHGA3Q9Y5H0 AK3P4-201ENST00000504283 583 ntBASIC4.64□□□□□ -1.67
PCDHGA3Q9Y5H0 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC4.64□□□□□ -1.67
PCDHGA3Q9Y5H0 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC4.64□□□□□ -1.67
PCDHGA3Q9Y5H0 RNA5SP392-201ENST00000516905 112 ntBASIC4.64□□□□□ -1.67
PCDHGA3Q9Y5H0 MTND4LP26-201ENST00000518144 282 ntBASIC4.64□□□□□ -1.67
PCDHGA3Q9Y5H0 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC4.64□□□□□ -1.67
PCDHGA3Q9Y5H0 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC4.64□□□□□ -1.67
PCDHGA3Q9Y5H0 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
PCDHGA3Q9Y5H0 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC4.64□□□□□ -1.67
PCDHGA3Q9Y5H0 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC4.64□□□□□ -1.67
PCDHGA3Q9Y5H0 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC4.64□□□□□ -1.67
PCDHGA3Q9Y5H0 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC4.64□□□□□ -1.67
PCDHGA3Q9Y5H0 UBE2L4-201ENST00000587688 464 ntBASIC4.64□□□□□ -1.67
PCDHGA3Q9Y5H0 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC4.64□□□□□ -1.67
PCDHGA3Q9Y5H0 TEX41-238ENST00000604253 709 ntTSL 5 BASIC4.64□□□□□ -1.67
PCDHGA3Q9Y5H0 AC007684.1-201ENST00000609671 477 ntBASIC4.64□□□□□ -1.67
PCDHGA3Q9Y5H0 AL133173.2-201ENST00000614270 90 ntBASIC4.64□□□□□ -1.67
PCDHGA3Q9Y5H0 AL158209.2-201ENST00000619266 216 ntBASIC4.64□□□□□ -1.67
PCDHGA3Q9Y5H0 AC012150.2-201ENST00000621300 544 ntBASIC4.64□□□□□ -1.67
PCDHGA3Q9Y5H0 AL158801.5-201ENST00000623123 465 ntBASIC4.64□□□□□ -1.67
PCDHGA3Q9Y5H0 AC124864.2-201ENST00000624736 186 ntBASIC4.64□□□□□ -1.67
PCDHGA3Q9Y5H0 AL160394.1-201ENST00000624765 724 ntBASIC4.64□□□□□ -1.67
PCDHGA3Q9Y5H0 AC244258.1-201ENST00000637553 1071 ntBASIC4.64□□□□□ -1.67
PCDHGA3Q9Y5H0 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
PCDHGA3Q9Y5H0 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC4.64□□□□□ -1.67
PCDHGA3Q9Y5H0 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
PCDHGA3Q9Y5H0 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
PCDHGA3Q9Y5H0 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
PCDHGA3Q9Y5H0 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC4.64□□□□□ -1.67
PCDHGA3Q9Y5H0 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
PCDHGA3Q9Y5H0 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC4.64□□□□□ -1.67
PCDHGA3Q9Y5H0 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
PCDHGA3Q9Y5H0 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC4.64□□□□□ -1.67
PCDHGA3Q9Y5H0 MFF-206ENST00000392059 1710 ntTSL 5 BASIC4.63□□□□□ -1.67
PCDHGA3Q9Y5H0 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC4.63□□□□□ -1.67
PCDHGA3Q9Y5H0 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
PCDHGA3Q9Y5H0 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
PCDHGA3Q9Y5H0 RNU6-263P-201ENST00000363811 107 ntBASIC4.63□□□□□ -1.67
PCDHGA3Q9Y5H0 RNA5SP28-201ENST00000363841 119 ntBASIC4.63□□□□□ -1.67
PCDHGA3Q9Y5H0 SNORA70.2-201ENST00000364506 135 ntBASIC4.63□□□□□ -1.67
PCDHGA3Q9Y5H0 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
PCDHGA3Q9Y5H0 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
PCDHGA3Q9Y5H0 AL121834.1-202ENST00000404494 277 ntBASIC4.63□□□□□ -1.67
PCDHGA3Q9Y5H0 RNU2-47P-201ENST00000410649 186 ntBASIC4.63□□□□□ -1.67
PCDHGA3Q9Y5H0 RSU1P3-201ENST00000412878 835 ntBASIC4.63□□□□□ -1.67
PCDHGA3Q9Y5H0 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC4.63□□□□□ -1.67
PCDHGA3Q9Y5H0 DPPA2P1-201ENST00000428060 556 ntBASIC4.63□□□□□ -1.67
PCDHGA3Q9Y5H0 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC4.63□□□□□ -1.67
PCDHGA3Q9Y5H0 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC4.63□□□□□ -1.67
PCDHGA3Q9Y5H0 ATP6V0E1P2-201ENST00000441771 245 ntBASIC4.63□□□□□ -1.67
PCDHGA3Q9Y5H0 USP9YP15-201ENST00000442391 422 ntBASIC4.63□□□□□ -1.67
PCDHGA3Q9Y5H0 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC4.63□□□□□ -1.67
PCDHGA3Q9Y5H0 RGS5-217ENST00000451759 835 ntTSL 3 BASIC4.63□□□□□ -1.67
PCDHGA3Q9Y5H0 MTCO3P20-201ENST00000454926 688 ntBASIC4.63□□□□□ -1.67
PCDHGA3Q9Y5H0 AL672167.3-201ENST00000465951 960 ntBASIC4.63□□□□□ -1.67
PCDHGA3Q9Y5H0 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC4.63□□□□□ -1.67
PCDHGA3Q9Y5H0 AC020890.1-201ENST00000491837 504 ntBASIC4.63□□□□□ -1.67
PCDHGA3Q9Y5H0 AC012170.1-201ENST00000495139 359 ntBASIC4.63□□□□□ -1.67
PCDHGA3Q9Y5H0 AC017037.2-201ENST00000513850 890 ntBASIC4.63□□□□□ -1.67
PCDHGA3Q9Y5H0 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC4.63□□□□□ -1.67
PCDHGA3Q9Y5H0 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC4.63□□□□□ -1.67
PCDHGA3Q9Y5H0 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC4.63□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 127.2 ms