Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC4.59□□□□□ -1.67
PCDHB1Q9Y5F3 AC011276.1-201ENST00000469688 323 ntBASIC4.59□□□□□ -1.67
PCDHB1Q9Y5F3 RPL23AP65-201ENST00000475608 468 ntBASIC4.59□□□□□ -1.67
PCDHB1Q9Y5F3 AC021382.1-201ENST00000483523 359 ntBASIC4.59□□□□□ -1.67
PCDHB1Q9Y5F3 RPS4XP18-201ENST00000495480 763 ntBASIC4.59□□□□□ -1.67
PCDHB1Q9Y5F3 AC108078.1-201ENST00000508073 725 ntBASIC4.59□□□□□ -1.67
PCDHB1Q9Y5F3 IGKV2D-36-201ENST00000518643 226 ntBASIC4.59□□□□□ -1.67
PCDHB1Q9Y5F3 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC4.59□□□□□ -1.67
PCDHB1Q9Y5F3 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC4.59□□□□□ -1.67
PCDHB1Q9Y5F3 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
PCDHB1Q9Y5F3 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC4.59□□□□□ -1.67
PCDHB1Q9Y5F3 AC124947.2-202ENST00000552735 133 ntBASIC4.59□□□□□ -1.67
PCDHB1Q9Y5F3 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC4.59□□□□□ -1.67
PCDHB1Q9Y5F3 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC4.59□□□□□ -1.67
PCDHB1Q9Y5F3 AC105129.1-201ENST00000560250 297 ntBASIC4.59□□□□□ -1.67
PCDHB1Q9Y5F3 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC4.59□□□□□ -1.67
PCDHB1Q9Y5F3 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC4.59□□□□□ -1.67
PCDHB1Q9Y5F3 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC4.59□□□□□ -1.67
PCDHB1Q9Y5F3 AC004853.1-201ENST00000604902 698 ntBASIC4.59□□□□□ -1.67
PCDHB1Q9Y5F3 BX664608.1-201ENST00000610519 487 ntBASIC4.59□□□□□ -1.67
PCDHB1Q9Y5F3 MIR6716-201ENST00000613413 80 ntBASIC4.59□□□□□ -1.67
PCDHB1Q9Y5F3 AC090517.2-201ENST00000614966 680 ntBASIC4.59□□□□□ -1.67
PCDHB1Q9Y5F3 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC4.59□□□□□ -1.67
PCDHB1Q9Y5F3 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC4.59□□□□□ -1.67
PCDHB1Q9Y5F3 AC131238.1-201ENST00000617135 328 ntBASIC4.59□□□□□ -1.67
PCDHB1Q9Y5F3 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
PCDHB1Q9Y5F3 CR381653.2-201ENST00000624041 768 ntBASIC4.59□□□□□ -1.67
PCDHB1Q9Y5F3 AC079597.1-201ENST00000624306 508 ntBASIC4.59□□□□□ -1.67
PCDHB1Q9Y5F3 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC4.59□□□□□ -1.68
PCDHB1Q9Y5F3 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC4.59□□□□□ -1.68
PCDHB1Q9Y5F3 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC4.59□□□□□ -1.68
PCDHB1Q9Y5F3 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
PCDHB1Q9Y5F3 AC009951.1-201ENST00000623674 2614 ntBASIC4.59□□□□□ -1.68
PCDHB1Q9Y5F3 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.58□□□□□ -1.68
PCDHB1Q9Y5F3 ZNF137P-201ENST00000456718 1920 ntBASIC4.58□□□□□ -1.68
PCDHB1Q9Y5F3 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
PCDHB1Q9Y5F3 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC4.58□□□□□ -1.68
PCDHB1Q9Y5F3 MTND5P33-201ENST00000571250 1450 ntBASIC4.58□□□□□ -1.68
PCDHB1Q9Y5F3 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
PCDHB1Q9Y5F3 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC4.58□□□□□ -1.68
PCDHB1Q9Y5F3 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
PCDHB1Q9Y5F3 SNORD51-201ENST00000384320 80 ntBASIC4.58□□□□□ -1.68
PCDHB1Q9Y5F3 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
PCDHB1Q9Y5F3 RPS3AP36-201ENST00000398190 775 ntBASIC4.58□□□□□ -1.68
PCDHB1Q9Y5F3 AC078974.1-201ENST00000411597 223 ntBASIC4.58□□□□□ -1.68
PCDHB1Q9Y5F3 UQCRBP1-201ENST00000421129 336 ntBASIC4.58□□□□□ -1.68
PCDHB1Q9Y5F3 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
PCDHB1Q9Y5F3 RPS12P5-201ENST00000423449 371 ntBASIC4.58□□□□□ -1.68
PCDHB1Q9Y5F3 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC4.58□□□□□ -1.68
PCDHB1Q9Y5F3 RPS27AP12-201ENST00000429552 465 ntBASIC4.58□□□□□ -1.68
PCDHB1Q9Y5F3 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
PCDHB1Q9Y5F3 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC4.58□□□□□ -1.68
PCDHB1Q9Y5F3 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC4.58□□□□□ -1.68
PCDHB1Q9Y5F3 AL596276.1-201ENST00000434465 418 ntBASIC4.58□□□□□ -1.68
PCDHB1Q9Y5F3 UBE2V1P8-201ENST00000437166 265 ntBASIC4.58□□□□□ -1.68
PCDHB1Q9Y5F3 AC112653.1-201ENST00000443851 386 ntBASIC4.58□□□□□ -1.68
PCDHB1Q9Y5F3 ISCUP1-201ENST00000454451 448 ntBASIC4.58□□□□□ -1.68
PCDHB1Q9Y5F3 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC4.58□□□□□ -1.68
PCDHB1Q9Y5F3 snoU109.4-201ENST00000458953 143 ntBASIC4.58□□□□□ -1.68
PCDHB1Q9Y5F3 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC4.58□□□□□ -1.68
PCDHB1Q9Y5F3 AC012170.1-201ENST00000495139 359 ntBASIC4.58□□□□□ -1.68
PCDHB1Q9Y5F3 AC108475.1-201ENST00000507880 950 ntBASIC4.58□□□□□ -1.68
PCDHB1Q9Y5F3 PGBD4P4-201ENST00000509673 613 ntBASIC4.58□□□□□ -1.68
PCDHB1Q9Y5F3 AC008549.1-201ENST00000512900 643 ntBASIC4.58□□□□□ -1.68
PCDHB1Q9Y5F3 NPM1P41-201ENST00000512920 831 ntBASIC4.58□□□□□ -1.68
PCDHB1Q9Y5F3 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC4.58□□□□□ -1.68
PCDHB1Q9Y5F3 OR8L1P-201ENST00000534005 955 ntBASIC4.58□□□□□ -1.68
PCDHB1Q9Y5F3 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC4.58□□□□□ -1.68
PCDHB1Q9Y5F3 AHI1-217ENST00000534469 680 ntTSL 3 BASIC4.58□□□□□ -1.68
PCDHB1Q9Y5F3 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC4.58□□□□□ -1.68
PCDHB1Q9Y5F3 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC4.58□□□□□ -1.68
PCDHB1Q9Y5F3 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC4.58□□□□□ -1.68
PCDHB1Q9Y5F3 AC099489.2-201ENST00000574976 260 ntBASIC4.58□□□□□ -1.68
PCDHB1Q9Y5F3 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC4.58□□□□□ -1.68
PCDHB1Q9Y5F3 MIR3939-201ENST00000582614 106 ntBASIC4.58□□□□□ -1.68
PCDHB1Q9Y5F3 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC4.58□□□□□ -1.68
PCDHB1Q9Y5F3 AL606834.2-201ENST00000602954 668 ntBASIC4.58□□□□□ -1.68
PCDHB1Q9Y5F3 AC067959.1-201ENST00000604334 379 ntBASIC4.58□□□□□ -1.68
PCDHB1Q9Y5F3 AC008966.2-201ENST00000606157 453 ntBASIC4.58□□□□□ -1.68
PCDHB1Q9Y5F3 AF250324.2-201ENST00000608299 610 ntBASIC4.58□□□□□ -1.68
PCDHB1Q9Y5F3 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC4.58□□□□□ -1.68
PCDHB1Q9Y5F3 AC105429.2-201ENST00000610567 517 ntBASIC4.58□□□□□ -1.68
PCDHB1Q9Y5F3 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
PCDHB1Q9Y5F3 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
PCDHB1Q9Y5F3 AL161637.1-201ENST00000622380 412 ntBASIC4.58□□□□□ -1.68
PCDHB1Q9Y5F3 AC011944.2-201ENST00000624440 683 ntBASIC4.58□□□□□ -1.68
PCDHB1Q9Y5F3 U3.53-201ENST00000628922 216 ntBASIC4.58□□□□□ -1.68
PCDHB1Q9Y5F3 AC126323.6-202ENST00000568092 3511 ntBASIC4.58□□□□□ -1.68
PCDHB1Q9Y5F3 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
PCDHB1Q9Y5F3 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
PCDHB1Q9Y5F3 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
PCDHB1Q9Y5F3 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
PCDHB1Q9Y5F3 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
PCDHB1Q9Y5F3 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
PCDHB1Q9Y5F3 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
PCDHB1Q9Y5F3 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
PCDHB1Q9Y5F3 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
PCDHB1Q9Y5F3 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC4.57□□□□□ -1.68
PCDHB1Q9Y5F3 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC4.57□□□□□ -1.68
PCDHB1Q9Y5F3 EEF1A1P42-201ENST00000613436 1331 ntBASIC4.57□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 108.1 ms