Protein–RNA interactions for Protein: Q9Y296

TRAPPC4, Trafficking protein particle complex subunit 4, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4Q9Y296 RBM6-203ENST00000421682 684 ntTSL 2 BASIC2.95□□□□□ -1.94
TRAPPC4Q9Y296 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC2.95□□□□□ -1.94
TRAPPC4Q9Y296 TRIAP1P1-201ENST00000427062 225 ntBASIC2.95□□□□□ -1.94
TRAPPC4Q9Y296 PSMA2P3-201ENST00000429685 675 ntBASIC2.95□□□□□ -1.94
TRAPPC4Q9Y296 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC2.95□□□□□ -1.94
TRAPPC4Q9Y296 AL590103.1-201ENST00000434488 307 ntBASIC2.95□□□□□ -1.94
TRAPPC4Q9Y296 SDR42E1P3-201ENST00000438345 502 ntBASIC2.95□□□□□ -1.94
TRAPPC4Q9Y296 AC115115.1-201ENST00000449927 248 ntBASIC2.95□□□□□ -1.94
TRAPPC4Q9Y296 HMGN3P1-201ENST00000453847 193 ntBASIC2.95□□□□□ -1.94
TRAPPC4Q9Y296 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC2.95□□□□□ -1.94
TRAPPC4Q9Y296 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC2.95□□□□□ -1.94
TRAPPC4Q9Y296 AC008155.2-201ENST00000464337 397 ntBASIC2.95□□□□□ -1.94
TRAPPC4Q9Y296 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC2.95□□□□□ -1.94
TRAPPC4Q9Y296 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC2.95□□□□□ -1.94
TRAPPC4Q9Y296 RN7SKP244-201ENST00000516513 307 ntBASIC2.95□□□□□ -1.94
TRAPPC4Q9Y296 snoZ278.1-201ENST00000517059 112 ntBASIC2.95□□□□□ -1.94
TRAPPC4Q9Y296 RNU6-1028P-201ENST00000517164 93 ntBASIC2.95□□□□□ -1.94
TRAPPC4Q9Y296 RPL12P22-201ENST00000519073 490 ntBASIC2.95□□□□□ -1.94
TRAPPC4Q9Y296 AP001207.1-201ENST00000524051 481 ntBASIC2.95□□□□□ -1.94
TRAPPC4Q9Y296 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC2.95□□□□□ -1.94
TRAPPC4Q9Y296 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC2.95□□□□□ -1.94
TRAPPC4Q9Y296 AC007536.1-201ENST00000533382 349 ntBASIC2.95□□□□□ -1.94
TRAPPC4Q9Y296 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC2.95□□□□□ -1.94
TRAPPC4Q9Y296 AC010198.2-201ENST00000550612 259 ntBASIC2.95□□□□□ -1.94
TRAPPC4Q9Y296 HIGD1AP1-201ENST00000550979 275 ntBASIC2.95□□□□□ -1.94
TRAPPC4Q9Y296 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC2.95□□□□□ -1.94
TRAPPC4Q9Y296 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC2.95□□□□□ -1.94
TRAPPC4Q9Y296 MIR3690-201ENST00000580266 75 ntBASIC2.95□□□□□ -1.94
TRAPPC4Q9Y296 AC090616.5-202ENST00000582111 297 ntBASIC2.95□□□□□ -1.94
TRAPPC4Q9Y296 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
TRAPPC4Q9Y296 AC090330.1-201ENST00000588646 764 ntBASIC2.95□□□□□ -1.94
TRAPPC4Q9Y296 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC2.95□□□□□ -1.94
TRAPPC4Q9Y296 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC2.95□□□□□ -1.94
TRAPPC4Q9Y296 CKS1BP3-201ENST00000600888 237 ntBASIC2.95□□□□□ -1.94
TRAPPC4Q9Y296 AP000238.1-201ENST00000608759 426 ntBASIC2.95□□□□□ -1.94
TRAPPC4Q9Y296 AP005137.2-201ENST00000609238 400 ntBASIC2.95□□□□□ -1.94
TRAPPC4Q9Y296 AC069234.5-201ENST00000611056 416 ntBASIC2.95□□□□□ -1.94
TRAPPC4Q9Y296 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC2.95□□□□□ -1.94
TRAPPC4Q9Y296 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC2.95□□□□□ -1.94
TRAPPC4Q9Y296 AC004808.1-201ENST00000627671 721 ntBASIC2.95□□□□□ -1.94
TRAPPC4Q9Y296 LINC00836-203ENST00000628620 1179 ntTSL 5 BASIC2.95□□□□□ -1.94
TRAPPC4Q9Y296 MTCO1P24-201ENST00000515438 1558 ntBASIC2.95□□□□□ -1.94
TRAPPC4Q9Y296 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
TRAPPC4Q9Y296 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC2.95□□□□□ -1.94
TRAPPC4Q9Y296 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC2.95□□□□□ -1.94
TRAPPC4Q9Y296 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC2.94□□□□□ -1.94
TRAPPC4Q9Y296 MTND4P9-201ENST00000507819 1346 ntBASIC2.94□□□□□ -1.94
TRAPPC4Q9Y296 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC2.94□□□□□ -1.94
TRAPPC4Q9Y296 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC2.94□□□□□ -1.94
TRAPPC4Q9Y296 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
TRAPPC4Q9Y296 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
TRAPPC4Q9Y296 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
TRAPPC4Q9Y296 RNU6-839P-201ENST00000363347 108 ntBASIC2.94□□□□□ -1.94
TRAPPC4Q9Y296 RNU6-298P-201ENST00000390888 96 ntBASIC2.94□□□□□ -1.94
TRAPPC4Q9Y296 U3.19-201ENST00000390893 196 ntBASIC2.94□□□□□ -1.94
TRAPPC4Q9Y296 AL355379.1-201ENST00000405542 640 ntBASIC2.94□□□□□ -1.94
TRAPPC4Q9Y296 RPL23AP47-201ENST00000408017 460 ntBASIC2.94□□□□□ -1.94
TRAPPC4Q9Y296 RNA5SP44-201ENST00000410446 133 ntBASIC2.94□□□□□ -1.94
TRAPPC4Q9Y296 BX323014.1-201ENST00000412876 237 ntBASIC2.94□□□□□ -1.94
TRAPPC4Q9Y296 AC245054.2-201ENST00000415639 319 ntBASIC2.94□□□□□ -1.94
TRAPPC4Q9Y296 OFD1P2Y-201ENST00000421895 1149 ntBASIC2.94□□□□□ -1.94
TRAPPC4Q9Y296 RPF2P1-201ENST00000424137 906 ntBASIC2.94□□□□□ -1.94
TRAPPC4Q9Y296 MTCYBP32-201ENST00000427945 1084 ntBASIC2.94□□□□□ -1.94
TRAPPC4Q9Y296 AC012497.1-201ENST00000429392 575 ntBASIC2.94□□□□□ -1.94
TRAPPC4Q9Y296 AC011242.1-201ENST00000433596 1158 ntBASIC2.94□□□□□ -1.94
TRAPPC4Q9Y296 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC2.94□□□□□ -1.94
TRAPPC4Q9Y296 RNF2P1-201ENST00000442955 1010 ntBASIC2.94□□□□□ -1.94
TRAPPC4Q9Y296 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC2.94□□□□□ -1.94
TRAPPC4Q9Y296 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
TRAPPC4Q9Y296 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC2.94□□□□□ -1.94
TRAPPC4Q9Y296 ELOCP23-201ENST00000452014 332 ntBASIC2.94□□□□□ -1.94
TRAPPC4Q9Y296 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC2.94□□□□□ -1.94
TRAPPC4Q9Y296 HMGN2P16-201ENST00000456802 261 ntBASIC2.94□□□□□ -1.94
TRAPPC4Q9Y296 VN1R17P-201ENST00000472048 1090 ntBASIC2.94□□□□□ -1.94
TRAPPC4Q9Y296 RPL7P38-201ENST00000488396 739 ntBASIC2.94□□□□□ -1.94
TRAPPC4Q9Y296 AC011352.3-201ENST00000505162 593 ntBASIC2.94□□□□□ -1.94
TRAPPC4Q9Y296 AC021678.1-201ENST00000505195 936 ntBASIC2.94□□□□□ -1.94
TRAPPC4Q9Y296 HIGD1AP3-201ENST00000515857 278 ntBASIC2.94□□□□□ -1.94
TRAPPC4Q9Y296 NDUFS5P6-201ENST00000529136 295 ntBASIC2.94□□□□□ -1.94
TRAPPC4Q9Y296 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC2.94□□□□□ -1.94
TRAPPC4Q9Y296 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC2.94□□□□□ -1.94
TRAPPC4Q9Y296 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC2.94□□□□□ -1.94
TRAPPC4Q9Y296 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC2.94□□□□□ -1.94
TRAPPC4Q9Y296 AC074051.3-201ENST00000570238 358 ntBASIC2.94□□□□□ -1.94
TRAPPC4Q9Y296 MAGOH2P-202ENST00000584384 429 ntBASIC2.94□□□□□ -1.94
TRAPPC4Q9Y296 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC2.94□□□□□ -1.94
TRAPPC4Q9Y296 AP001542.2-201ENST00000593141 364 ntBASIC2.94□□□□□ -1.94
TRAPPC4Q9Y296 AL606834.3-201ENST00000602615 496 ntBASIC2.94□□□□□ -1.94
TRAPPC4Q9Y296 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC2.94□□□□□ -1.94
TRAPPC4Q9Y296 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC2.94□□□□□ -1.94
TRAPPC4Q9Y296 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC2.94□□□□□ -1.94
TRAPPC4Q9Y296 AC073348.1-201ENST00000623002 331 ntBASIC2.94□□□□□ -1.94
TRAPPC4Q9Y296 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
TRAPPC4Q9Y296 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
TRAPPC4Q9Y296 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC2.94□□□□□ -1.94
TRAPPC4Q9Y296 MTND5P24-201ENST00000438892 1767 ntBASIC2.94□□□□□ -1.94
TRAPPC4Q9Y296 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC2.94□□□□□ -1.94
TRAPPC4Q9Y296 AL645568.2-201ENST00000432815 1337 ntBASIC2.93□□□□□ -1.94
TRAPPC4Q9Y296 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC2.93□□□□□ -1.94
TRAPPC4Q9Y296 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC2.93□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 88.3 ms