Protein–RNA interactions for Protein: Q9UGM1

CHRNA9, Neuronal acetylcholine receptor subunit alpha-9, humanhuman

Predictions only

Length 479 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA9Q9UGM1 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC3.21□□□□□ -1.9
CHRNA9Q9UGM1 HSPE1P3-201ENST00000559254 309 ntBASIC3.21□□□□□ -1.9
CHRNA9Q9UGM1 FAM60BP-201ENST00000578364 658 ntBASIC3.21□□□□□ -1.9
CHRNA9Q9UGM1 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC3.21□□□□□ -1.9
CHRNA9Q9UGM1 AC068620.3-201ENST00000602749 560 ntBASIC3.21□□□□□ -1.9
CHRNA9Q9UGM1 AL365503.1-201ENST00000605247 905 ntBASIC3.21□□□□□ -1.9
CHRNA9Q9UGM1 AL365400.2-201ENST00000605604 902 ntBASIC3.21□□□□□ -1.9
CHRNA9Q9UGM1 AP001521.1-201ENST00000609150 300 ntBASIC3.21□□□□□ -1.9
CHRNA9Q9UGM1 AC106028.5-201ENST00000610332 395 ntBASIC3.21□□□□□ -1.9
CHRNA9Q9UGM1 MIR7851-201ENST00000610611 160 ntBASIC3.21□□□□□ -1.9
CHRNA9Q9UGM1 AC068831.7-201ENST00000616954 363 ntBASIC3.21□□□□□ -1.9
CHRNA9Q9UGM1 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC3.21□□□□□ -1.9
CHRNA9Q9UGM1 CR392039.5-201ENST00000623201 510 ntBASIC3.21□□□□□ -1.9
CHRNA9Q9UGM1 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC3.21□□□□□ -1.9
CHRNA9Q9UGM1 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC3.21□□□□□ -1.9
CHRNA9Q9UGM1 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
CHRNA9Q9UGM1 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.21□□□□□ -1.9
CHRNA9Q9UGM1 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
CHRNA9Q9UGM1 PWAR6-201ENST00000552334 4618 ntBASIC3.2□□□□□ -1.9
CHRNA9Q9UGM1 RIOK3P1-201ENST00000418778 1528 ntBASIC3.2□□□□□ -1.9
CHRNA9Q9UGM1 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC3.2□□□□□ -1.9
CHRNA9Q9UGM1 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
CHRNA9Q9UGM1 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
CHRNA9Q9UGM1 RNU6-216P-201ENST00000363282 104 ntBASIC3.2□□□□□ -1.9
CHRNA9Q9UGM1 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC3.2□□□□□ -1.9
CHRNA9Q9UGM1 MCTS2P-201ENST00000394552 546 ntBASIC3.2□□□□□ -1.9
CHRNA9Q9UGM1 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.2□□□□□ -1.9
CHRNA9Q9UGM1 RAB9AP3-201ENST00000412737 573 ntBASIC3.2□□□□□ -1.9
CHRNA9Q9UGM1 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC3.2□□□□□ -1.9
CHRNA9Q9UGM1 YPEL5P1-201ENST00000419731 367 ntBASIC3.2□□□□□ -1.9
CHRNA9Q9UGM1 RPF2P1-201ENST00000424137 906 ntBASIC3.2□□□□□ -1.9
CHRNA9Q9UGM1 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC3.2□□□□□ -1.9
CHRNA9Q9UGM1 CYCSP4-201ENST00000429682 331 ntBASIC3.2□□□□□ -1.9
CHRNA9Q9UGM1 SEPT7P5-201ENST00000434048 306 ntBASIC3.2□□□□□ -1.9
CHRNA9Q9UGM1 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
CHRNA9Q9UGM1 VN1R10P-201ENST00000447106 875 ntBASIC3.2□□□□□ -1.9
CHRNA9Q9UGM1 COX6CP18-201ENST00000448769 222 ntBASIC3.2□□□□□ -1.9
CHRNA9Q9UGM1 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC3.2□□□□□ -1.9
CHRNA9Q9UGM1 RAB9AP1-201ENST00000449393 573 ntBASIC3.2□□□□□ -1.9
CHRNA9Q9UGM1 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.2□□□□□ -1.9
CHRNA9Q9UGM1 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.2□□□□□ -1.9
CHRNA9Q9UGM1 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC3.2□□□□□ -1.9
CHRNA9Q9UGM1 RPL23AP14-201ENST00000468281 468 ntBASIC3.2□□□□□ -1.9
CHRNA9Q9UGM1 SETP14-201ENST00000497538 873 ntBASIC3.2□□□□□ -1.9
CHRNA9Q9UGM1 MTND4LP22-201ENST00000508209 276 ntBASIC3.2□□□□□ -1.9
CHRNA9Q9UGM1 AC104619.4-201ENST00000510773 249 ntBASIC3.2□□□□□ -1.9
CHRNA9Q9UGM1 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC3.2□□□□□ -1.9
CHRNA9Q9UGM1 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC3.2□□□□□ -1.9
CHRNA9Q9UGM1 AC108043.1-201ENST00000512696 574 ntBASIC3.2□□□□□ -1.9
CHRNA9Q9UGM1 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC3.2□□□□□ -1.9
CHRNA9Q9UGM1 TRMT10BP1-201ENST00000519377 943 ntBASIC3.2□□□□□ -1.9
CHRNA9Q9UGM1 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
CHRNA9Q9UGM1 ERHP1-201ENST00000523006 310 ntBASIC3.2□□□□□ -1.9
CHRNA9Q9UGM1 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC3.2□□□□□ -1.9
CHRNA9Q9UGM1 OR4T1P-201ENST00000554933 911 ntBASIC3.2□□□□□ -1.9
CHRNA9Q9UGM1 MEG8-215ENST00000555354 469 ntTSL 3 BASIC3.2□□□□□ -1.9
CHRNA9Q9UGM1 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.2□□□□□ -1.9
CHRNA9Q9UGM1 AC122134.1-202ENST00000569111 1201 ntBASIC3.2□□□□□ -1.9
CHRNA9Q9UGM1 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC3.2□□□□□ -1.9
CHRNA9Q9UGM1 AC012669.1-201ENST00000603209 283 ntBASIC3.2□□□□□ -1.9
CHRNA9Q9UGM1 AL109618.2-201ENST00000605527 211 ntBASIC3.2□□□□□ -1.9
CHRNA9Q9UGM1 AC069545.1-201ENST00000605671 358 ntBASIC3.2□□□□□ -1.9
CHRNA9Q9UGM1 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC3.2□□□□□ -1.9
CHRNA9Q9UGM1 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC3.2□□□□□ -1.9
CHRNA9Q9UGM1 AC093673.2-201ENST00000609674 331 ntBASIC3.2□□□□□ -1.9
CHRNA9Q9UGM1 AC002076.2-201ENST00000617362 122 ntBASIC3.2□□□□□ -1.9
CHRNA9Q9UGM1 AL353748.2-201ENST00000622148 471 ntBASIC3.2□□□□□ -1.9
CHRNA9Q9UGM1 AL357559.1-201ENST00000622228 274 ntBASIC3.2□□□□□ -1.9
CHRNA9Q9UGM1 AC039056.2-201ENST00000622261 511 ntBASIC3.2□□□□□ -1.9
CHRNA9Q9UGM1 OR1S1-201ENST00000624470 978 ntBASIC3.2□□□□□ -1.9
CHRNA9Q9UGM1 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
CHRNA9Q9UGM1 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
CHRNA9Q9UGM1 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
CHRNA9Q9UGM1 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
CHRNA9Q9UGM1 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
CHRNA9Q9UGM1 AL079305.1-201ENST00000623159 3008 ntBASIC3.19□□□□□ -1.9
CHRNA9Q9UGM1 AL513185.3-201ENST00000433335 1300 ntBASIC3.19□□□□□ -1.9
CHRNA9Q9UGM1 RNU5D-1-201ENST00000363299 116 ntBASIC3.19□□□□□ -1.9
CHRNA9Q9UGM1 RNU6-1155P-201ENST00000363554 107 ntBASIC3.19□□□□□ -1.9
CHRNA9Q9UGM1 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.19□□□□□ -1.9
CHRNA9Q9UGM1 RN7SKP285-201ENST00000410137 318 ntBASIC3.19□□□□□ -1.9
CHRNA9Q9UGM1 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC3.19□□□□□ -1.9
CHRNA9Q9UGM1 MTND4P3-201ENST00000417829 541 ntBASIC3.19□□□□□ -1.9
CHRNA9Q9UGM1 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.19□□□□□ -1.9
CHRNA9Q9UGM1 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC3.19□□□□□ -1.9
CHRNA9Q9UGM1 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC3.19□□□□□ -1.9
CHRNA9Q9UGM1 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC3.19□□□□□ -1.9
CHRNA9Q9UGM1 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
CHRNA9Q9UGM1 RPL36AP33-201ENST00000450395 310 ntBASIC3.19□□□□□ -1.9
CHRNA9Q9UGM1 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
CHRNA9Q9UGM1 AC007967.1-201ENST00000455422 1159 ntBASIC3.19□□□□□ -1.9
CHRNA9Q9UGM1 AC087312.1-201ENST00000471411 480 ntBASIC3.19□□□□□ -1.9
CHRNA9Q9UGM1 HMGN2P13-201ENST00000476476 274 ntBASIC3.19□□□□□ -1.9
CHRNA9Q9UGM1 CAB39P1-201ENST00000502277 460 ntBASIC3.19□□□□□ -1.9
CHRNA9Q9UGM1 AC020893.1-201ENST00000502452 580 ntBASIC3.19□□□□□ -1.9
CHRNA9Q9UGM1 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC3.19□□□□□ -1.9
CHRNA9Q9UGM1 NAMPTP2-201ENST00000505629 1115 ntBASIC3.19□□□□□ -1.9
CHRNA9Q9UGM1 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC3.19□□□□□ -1.9
CHRNA9Q9UGM1 SNORA70.18-201ENST00000516696 98 ntBASIC3.19□□□□□ -1.9
CHRNA9Q9UGM1 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC3.19□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 90.5 ms