Protein–RNA interactions for Protein: Q9NZN3

EHD3, EH domain-containing protein 3, humanhuman

Predictions only

Length 535 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EHD3Q9NZN3 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC4.34□□□□□ -1.71
EHD3Q9NZN3 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC4.34□□□□□ -1.71
EHD3Q9NZN3 AL352979.3-201ENST00000553515 247 ntBASIC4.34□□□□□ -1.71
EHD3Q9NZN3 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC4.34□□□□□ -1.71
EHD3Q9NZN3 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC4.34□□□□□ -1.71
EHD3Q9NZN3 MIR3682-201ENST00000581338 84 ntBASIC4.34□□□□□ -1.71
EHD3Q9NZN3 NF1P5-201ENST00000588287 448 ntBASIC4.34□□□□□ -1.71
EHD3Q9NZN3 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC4.34□□□□□ -1.71
EHD3Q9NZN3 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC4.34□□□□□ -1.71
EHD3Q9NZN3 DUXAP4-201ENST00000603046 613 ntBASIC4.34□□□□□ -1.71
EHD3Q9NZN3 AC005191.1-201ENST00000603950 358 ntBASIC4.34□□□□□ -1.71
EHD3Q9NZN3 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC4.34□□□□□ -1.71
EHD3Q9NZN3 AC009268.2-201ENST00000621925 457 ntBASIC4.34□□□□□ -1.71
EHD3Q9NZN3 AC005609.4-201ENST00000625071 447 ntBASIC4.34□□□□□ -1.71
EHD3Q9NZN3 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
EHD3Q9NZN3 AC006971.1-201ENST00000407916 4486 ntBASIC4.34□□□□□ -1.71
EHD3Q9NZN3 ANKRD20A10P-201ENST00000457591 1515 ntBASIC4.34□□□□□ -1.71
EHD3Q9NZN3 AL391684.1-202ENST00000641293 1636 ntBASIC4.34□□□□□ -1.71
EHD3Q9NZN3 ZNF33BP1-201ENST00000452497 1834 ntBASIC4.34□□□□□ -1.71
EHD3Q9NZN3 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC4.34□□□□□ -1.72
EHD3Q9NZN3 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC4.34□□□□□ -1.72
EHD3Q9NZN3 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC4.34□□□□□ -1.72
EHD3Q9NZN3 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC4.34□□□□□ -1.72
EHD3Q9NZN3 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC4.33□□□□□ -1.72
EHD3Q9NZN3 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
EHD3Q9NZN3 AC015813.6-201ENST00000624409 5808 ntBASIC4.33□□□□□ -1.72
EHD3Q9NZN3 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
EHD3Q9NZN3 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC4.33□□□□□ -1.72
EHD3Q9NZN3 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
EHD3Q9NZN3 MIR448-201ENST00000362131 111 ntBASIC4.33□□□□□ -1.72
EHD3Q9NZN3 RNU6-744P-201ENST00000365557 107 ntBASIC4.33□□□□□ -1.72
EHD3Q9NZN3 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
EHD3Q9NZN3 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
EHD3Q9NZN3 Y_RNA.409-201ENST00000383990 98 ntBASIC4.33□□□□□ -1.72
EHD3Q9NZN3 RNU6-1316P-201ENST00000384242 108 ntBASIC4.33□□□□□ -1.72
EHD3Q9NZN3 MIR585-201ENST00000384887 94 ntBASIC4.33□□□□□ -1.72
EHD3Q9NZN3 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
EHD3Q9NZN3 MIR298-201ENST00000401212 88 ntBASIC4.33□□□□□ -1.72
EHD3Q9NZN3 MIR937-201ENST00000401271 86 ntBASIC4.33□□□□□ -1.72
EHD3Q9NZN3 RPA3-203ENST00000401447 414 ntTSL 3 BASIC4.33□□□□□ -1.72
EHD3Q9NZN3 RN7SKP106-201ENST00000410832 272 ntBASIC4.33□□□□□ -1.72
EHD3Q9NZN3 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
EHD3Q9NZN3 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC4.33□□□□□ -1.72
EHD3Q9NZN3 ARPC3P1-201ENST00000437218 533 ntBASIC4.33□□□□□ -1.72
EHD3Q9NZN3 RPL23AP74-201ENST00000437246 471 ntBASIC4.33□□□□□ -1.72
EHD3Q9NZN3 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC4.33□□□□□ -1.72
EHD3Q9NZN3 EEF1A1P1-201ENST00000447052 739 ntBASIC4.33□□□□□ -1.72
EHD3Q9NZN3 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC4.33□□□□□ -1.72
EHD3Q9NZN3 RBM43P1-201ENST00000476891 1081 ntBASIC4.33□□□□□ -1.72
EHD3Q9NZN3 AC231760.1-201ENST00000498002 260 ntBASIC4.33□□□□□ -1.72
EHD3Q9NZN3 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC4.33□□□□□ -1.72
EHD3Q9NZN3 HMGB1P29-201ENST00000505659 499 ntBASIC4.33□□□□□ -1.72
EHD3Q9NZN3 ARL4AP2-201ENST00000507378 601 ntBASIC4.33□□□□□ -1.72
EHD3Q9NZN3 AP001893.2-201ENST00000526949 202 ntBASIC4.33□□□□□ -1.72
EHD3Q9NZN3 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
EHD3Q9NZN3 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC4.33□□□□□ -1.72
EHD3Q9NZN3 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC4.33□□□□□ -1.72
EHD3Q9NZN3 AC063949.1-201ENST00000552900 865 ntBASIC4.33□□□□□ -1.72
EHD3Q9NZN3 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC4.33□□□□□ -1.72
EHD3Q9NZN3 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC4.33□□□□□ -1.72
EHD3Q9NZN3 AC110743.1-201ENST00000584870 478 ntBASIC4.33□□□□□ -1.72
EHD3Q9NZN3 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC4.33□□□□□ -1.72
EHD3Q9NZN3 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC4.33□□□□□ -1.72
EHD3Q9NZN3 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC4.33□□□□□ -1.72
EHD3Q9NZN3 AC073091.2-201ENST00000603205 907 ntBASIC4.33□□□□□ -1.72
EHD3Q9NZN3 AL359999.1-201ENST00000604513 294 ntBASIC4.33□□□□□ -1.72
EHD3Q9NZN3 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC4.33□□□□□ -1.72
EHD3Q9NZN3 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC4.33□□□□□ -1.72
EHD3Q9NZN3 BX323046.1-201ENST00000610145 535 ntBASIC4.33□□□□□ -1.72
EHD3Q9NZN3 AL590282.1-201ENST00000610379 1136 ntBASIC4.33□□□□□ -1.72
EHD3Q9NZN3 AC123768.4-201ENST00000616244 701 ntBASIC4.33□□□□□ -1.72
EHD3Q9NZN3 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC4.33□□□□□ -1.72
EHD3Q9NZN3 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.33□□□□□ -1.72
EHD3Q9NZN3 CARF-208ENST00000428585 2513 ntTSL 2 BASIC4.33□□□□□ -1.72
EHD3Q9NZN3 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
EHD3Q9NZN3 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC4.33□□□□□ -1.72
EHD3Q9NZN3 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC4.32□□□□□ -1.72
EHD3Q9NZN3 AC073544.1-201ENST00000600110 1595 ntBASIC4.32□□□□□ -1.72
EHD3Q9NZN3 AC108467.2-201ENST00000617640 1597 ntBASIC4.32□□□□□ -1.72
EHD3Q9NZN3 AL049780.3-201ENST00000624612 1583 ntBASIC4.32□□□□□ -1.72
EHD3Q9NZN3 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.32□□□□□ -1.72
EHD3Q9NZN3 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC4.32□□□□□ -1.72
EHD3Q9NZN3 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.32□□□□□ -1.72
EHD3Q9NZN3 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
EHD3Q9NZN3 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
EHD3Q9NZN3 Y_RNA.46-201ENST00000362695 102 ntBASIC4.32□□□□□ -1.72
EHD3Q9NZN3 RNY4P14-201ENST00000363656 96 ntBASIC4.32□□□□□ -1.72
EHD3Q9NZN3 RNU6-1226P-201ENST00000384317 107 ntBASIC4.32□□□□□ -1.72
EHD3Q9NZN3 AL024474.1-201ENST00000404655 591 ntBASIC4.32□□□□□ -1.72
EHD3Q9NZN3 AC069218.2-201ENST00000411665 344 ntBASIC4.32□□□□□ -1.72
EHD3Q9NZN3 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
EHD3Q9NZN3 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC4.32□□□□□ -1.72
EHD3Q9NZN3 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC4.32□□□□□ -1.72
EHD3Q9NZN3 TRIM60P10Y-201ENST00000425589 751 ntBASIC4.32□□□□□ -1.72
EHD3Q9NZN3 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC4.32□□□□□ -1.72
EHD3Q9NZN3 TRIM60P8Y-201ENST00000436338 762 ntBASIC4.32□□□□□ -1.72
EHD3Q9NZN3 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC4.32□□□□□ -1.72
EHD3Q9NZN3 MTND4P25-201ENST00000441039 533 ntBASIC4.32□□□□□ -1.72
EHD3Q9NZN3 FAM103A2P-201ENST00000444122 354 ntBASIC4.32□□□□□ -1.72
EHD3Q9NZN3 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC4.32□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 132.7 ms