Protein–RNA interactions for Protein: Q9NSU2

TREX1, Three-prime repair exonuclease 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1Q9NSU2 SNORA71.1-201ENST00000364523 117 ntBASIC2.94□□□□□ -1.94
TREX1Q9NSU2 UBE2V1P15-201ENST00000407776 448 ntBASIC2.94□□□□□ -1.94
TREX1Q9NSU2 ERMN-204ENST00000409925 556 ntTSL 4 BASIC2.94□□□□□ -1.94
TREX1Q9NSU2 AL731575.1-201ENST00000413564 418 ntTSL 2 BASIC2.94□□□□□ -1.94
TREX1Q9NSU2 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
TREX1Q9NSU2 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC2.94□□□□□ -1.94
TREX1Q9NSU2 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC2.94□□□□□ -1.94
TREX1Q9NSU2 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC2.94□□□□□ -1.94
TREX1Q9NSU2 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC2.94□□□□□ -1.94
TREX1Q9NSU2 FABP5P3-201ENST00000437960 408 ntBASIC2.94□□□□□ -1.94
TREX1Q9NSU2 AC009969.1-201ENST00000438726 172 ntBASIC2.94□□□□□ -1.94
TREX1Q9NSU2 MTCO3P43-201ENST00000440974 771 ntBASIC2.94□□□□□ -1.94
TREX1Q9NSU2 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC2.94□□□□□ -1.94
TREX1Q9NSU2 AL162389.1-201ENST00000449233 177 ntBASIC2.94□□□□□ -1.94
TREX1Q9NSU2 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC2.94□□□□□ -1.94
TREX1Q9NSU2 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC2.94□□□□□ -1.94
TREX1Q9NSU2 RPL7P49-201ENST00000471402 708 ntBASIC2.94□□□□□ -1.94
TREX1Q9NSU2 AC010301.1-201ENST00000473936 355 ntBASIC2.94□□□□□ -1.94
TREX1Q9NSU2 AC108860.1-201ENST00000484521 383 ntBASIC2.94□□□□□ -1.94
TREX1Q9NSU2 ARL4AP2-201ENST00000507378 601 ntBASIC2.94□□□□□ -1.94
TREX1Q9NSU2 RNU6-488P-201ENST00000515918 99 ntBASIC2.94□□□□□ -1.94
TREX1Q9NSU2 RN7SKP272-201ENST00000516988 232 ntBASIC2.94□□□□□ -1.94
TREX1Q9NSU2 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC2.94□□□□□ -1.94
TREX1Q9NSU2 MIR3944-201ENST00000581277 108 ntBASIC2.94□□□□□ -1.94
TREX1Q9NSU2 AC012493.2-201ENST00000595083 291 ntBASIC2.94□□□□□ -1.94
TREX1Q9NSU2 AC015871.2-201ENST00000603605 948 ntBASIC2.94□□□□□ -1.94
TREX1Q9NSU2 BNIP3P11-201ENST00000603878 563 ntBASIC2.94□□□□□ -1.94
TREX1Q9NSU2 AC008962.1-201ENST00000605729 304 ntBASIC2.94□□□□□ -1.94
TREX1Q9NSU2 AC020923.1-201ENST00000624021 917 ntBASIC2.94□□□□□ -1.94
TREX1Q9NSU2 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC2.94□□□□□ -1.94
TREX1Q9NSU2 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
TREX1Q9NSU2 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC2.94□□□□□ -1.94
TREX1Q9NSU2 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC2.93□□□□□ -1.94
TREX1Q9NSU2 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC2.93□□□□□ -1.94
TREX1Q9NSU2 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
TREX1Q9NSU2 AP003122.5-201ENST00000527668 3766 ntBASIC2.93□□□□□ -1.94
TREX1Q9NSU2 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC2.93□□□□□ -1.94
TREX1Q9NSU2 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
TREX1Q9NSU2 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC2.93□□□□□ -1.94
TREX1Q9NSU2 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
TREX1Q9NSU2 HIST1H2APS3-201ENST00000403259 134 ntBASIC2.93□□□□□ -1.94
TREX1Q9NSU2 AL031121.1-201ENST00000406553 254 ntBASIC2.93□□□□□ -1.94
TREX1Q9NSU2 AL451074.5-201ENST00000415894 435 ntBASIC2.93□□□□□ -1.94
TREX1Q9NSU2 AC233728.2-201ENST00000425348 757 ntBASIC2.93□□□□□ -1.94
TREX1Q9NSU2 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC2.93□□□□□ -1.94
TREX1Q9NSU2 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC2.93□□□□□ -1.94
TREX1Q9NSU2 AC007403.1-201ENST00000427579 567 ntTSL 4 BASIC2.93□□□□□ -1.94
TREX1Q9NSU2 AL512649.1-201ENST00000428997 581 ntBASIC2.93□□□□□ -1.94
TREX1Q9NSU2 LINC02529-201ENST00000429657 772 ntTSL 3 BASIC2.93□□□□□ -1.94
TREX1Q9NSU2 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC2.93□□□□□ -1.94
TREX1Q9NSU2 RAB11AP1-201ENST00000442978 646 ntBASIC2.93□□□□□ -1.94
TREX1Q9NSU2 RNFT1P2-201ENST00000443064 757 ntBASIC2.93□□□□□ -1.94
TREX1Q9NSU2 RPS26P56-201ENST00000444468 240 ntBASIC2.93□□□□□ -1.94
TREX1Q9NSU2 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
TREX1Q9NSU2 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC2.93□□□□□ -1.94
TREX1Q9NSU2 RNF138P1-201ENST00000502765 546 ntBASIC2.93□□□□□ -1.94
TREX1Q9NSU2 AC004062.1-201ENST00000509926 645 ntBASIC2.93□□□□□ -1.94
TREX1Q9NSU2 RNU6-362P-201ENST00000516736 90 ntBASIC2.93□□□□□ -1.94
TREX1Q9NSU2 SNORA31.20-201ENST00000517111 133 ntBASIC2.93□□□□□ -1.94
TREX1Q9NSU2 IGKV2D-36-201ENST00000518643 226 ntBASIC2.93□□□□□ -1.94
TREX1Q9NSU2 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC2.93□□□□□ -1.94
TREX1Q9NSU2 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
TREX1Q9NSU2 ARL1-211ENST00000551828 776 ntTSL 5 BASIC2.93□□□□□ -1.94
TREX1Q9NSU2 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC2.93□□□□□ -1.94
TREX1Q9NSU2 LINC02185-202ENST00000576797 568 ntTSL 3 BASIC2.93□□□□□ -1.94
TREX1Q9NSU2 AC083760.1-201ENST00000589621 670 ntBASIC2.93□□□□□ -1.94
TREX1Q9NSU2 HSPE1P14-201ENST00000605812 302 ntBASIC2.93□□□□□ -1.94
TREX1Q9NSU2 AC096586.1-201ENST00000610267 561 ntBASIC2.93□□□□□ -1.94
TREX1Q9NSU2 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC2.93□□□□□ -1.94
TREX1Q9NSU2 AL110115.1-201ENST00000614396 364 ntBASIC2.93□□□□□ -1.94
TREX1Q9NSU2 STATH-208ENST00000615994 598 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
TREX1Q9NSU2 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
TREX1Q9NSU2 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC2.93□□□□□ -1.94
TREX1Q9NSU2 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC2.93□□□□□ -1.94
TREX1Q9NSU2 AC090617.7-201ENST00000623952 126 ntBASIC2.93□□□□□ -1.94
TREX1Q9NSU2 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
TREX1Q9NSU2 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
TREX1Q9NSU2 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC2.92□□□□□ -1.94
TREX1Q9NSU2 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC2.92□□□□□ -1.94
TREX1Q9NSU2 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.92□□□□□ -1.94
TREX1Q9NSU2 MTND5P7-201ENST00000413558 1798 ntBASIC2.92□□□□□ -1.94
TREX1Q9NSU2 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC2.92□□□□□ -1.94
TREX1Q9NSU2 OR5T1-202ENST00000641665 1471 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
TREX1Q9NSU2 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC2.92□□□□□ -1.94
TREX1Q9NSU2 RNU1-35P-201ENST00000362782 153 ntBASIC2.92□□□□□ -1.94
TREX1Q9NSU2 RNU6-374P-201ENST00000364146 108 ntBASIC2.92□□□□□ -1.94
TREX1Q9NSU2 SNORA51.4-201ENST00000364993 124 ntBASIC2.92□□□□□ -1.94
TREX1Q9NSU2 MIR23A-201ENST00000385245 73 ntBASIC2.92□□□□□ -1.94
TREX1Q9NSU2 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC2.92□□□□□ -1.94
TREX1Q9NSU2 AL158825.1-201ENST00000414735 521 ntBASIC2.92□□□□□ -1.94
TREX1Q9NSU2 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC2.92□□□□□ -1.94
TREX1Q9NSU2 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC2.92□□□□□ -1.94
TREX1Q9NSU2 AC104332.2-201ENST00000429959 156 ntBASIC2.92□□□□□ -1.94
TREX1Q9NSU2 AC010881.1-201ENST00000433830 235 ntBASIC2.92□□□□□ -1.94
TREX1Q9NSU2 AC092170.1-201ENST00000440211 356 ntBASIC2.92□□□□□ -1.94
TREX1Q9NSU2 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC2.92□□□□□ -1.94
TREX1Q9NSU2 snoU13.4-201ENST00000458916 104 ntBASIC2.92□□□□□ -1.94
TREX1Q9NSU2 RPL27AP5-201ENST00000469428 449 ntBASIC2.92□□□□□ -1.94
TREX1Q9NSU2 AC034236.1-201ENST00000469891 373 ntBASIC2.92□□□□□ -1.94
TREX1Q9NSU2 RPS27P23-201ENST00000487608 251 ntBASIC2.92□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 157.9 ms