Protein–RNA interactions for Protein: Q9NP77

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, humanhuman

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72Q9NP77 Y_RNA.158-201ENST00000363651 101 ntBASIC5.23□□□□□ -1.57
SSU72Q9NP77 Y_RNA.482-201ENST00000384377 111 ntBASIC5.23□□□□□ -1.57
SSU72Q9NP77 RNU6-310P-201ENST00000384655 107 ntBASIC5.23□□□□□ -1.57
SSU72Q9NP77 AL078599.1-201ENST00000402075 293 ntBASIC5.23□□□□□ -1.57
SSU72Q9NP77 HMGB1P20-201ENST00000402555 677 ntBASIC5.23□□□□□ -1.57
SSU72Q9NP77 RNU6-954P-201ENST00000411355 107 ntBASIC5.23□□□□□ -1.57
SSU72Q9NP77 AC009310.1-201ENST00000414414 451 ntBASIC5.23□□□□□ -1.57
SSU72Q9NP77 AC009965.2-201ENST00000425328 970 ntBASIC5.23□□□□□ -1.57
SSU72Q9NP77 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC5.23□□□□□ -1.57
SSU72Q9NP77 CBX3P6-201ENST00000430257 527 ntBASIC5.23□□□□□ -1.57
SSU72Q9NP77 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC5.23□□□□□ -1.57
SSU72Q9NP77 GSTM5P1-201ENST00000434751 660 ntBASIC5.23□□□□□ -1.57
SSU72Q9NP77 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC5.23□□□□□ -1.57
SSU72Q9NP77 TXNP1-201ENST00000441872 371 ntBASIC5.23□□□□□ -1.57
SSU72Q9NP77 YWHAEP1-201ENST00000453697 763 ntBASIC5.23□□□□□ -1.57
SSU72Q9NP77 MIR2053-201ENST00000459295 91 ntBASIC5.23□□□□□ -1.57
SSU72Q9NP77 RPL35AP28-201ENST00000459730 331 ntBASIC5.23□□□□□ -1.57
SSU72Q9NP77 RN7SL283P-201ENST00000489055 303 ntBASIC5.23□□□□□ -1.57
SSU72Q9NP77 HMGB1P30-201ENST00000492455 606 ntBASIC5.23□□□□□ -1.57
SSU72Q9NP77 RN7SL447P-201ENST00000494711 245 ntBASIC5.23□□□□□ -1.57
SSU72Q9NP77 RPS27P27-201ENST00000498779 255 ntBASIC5.23□□□□□ -1.57
SSU72Q9NP77 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC5.23□□□□□ -1.57
SSU72Q9NP77 RANP9-201ENST00000519957 271 ntBASIC5.23□□□□□ -1.57
SSU72Q9NP77 AC103843.1-201ENST00000527318 682 ntTSL 4 BASIC5.23□□□□□ -1.57
SSU72Q9NP77 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC5.23□□□□□ -1.57
SSU72Q9NP77 AC008269.2-201ENST00000561915 1105 ntBASIC5.23□□□□□ -1.57
SSU72Q9NP77 AC073539.2-201ENST00000597113 165 ntBASIC5.23□□□□□ -1.57
SSU72Q9NP77 Z99755.2-201ENST00000610215 364 ntTSL 3 BASIC5.23□□□□□ -1.57
SSU72Q9NP77 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC5.23□□□□□ -1.57
SSU72Q9NP77 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC5.23□□□□□ -1.57
SSU72Q9NP77 AP000843.1-201ENST00000624880 701 ntBASIC5.23□□□□□ -1.57
SSU72Q9NP77 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC5.23□□□□□ -1.57
SSU72Q9NP77 LINC00969-332ENST00000630874 738 ntTSL 5 BASIC5.23□□□□□ -1.57
SSU72Q9NP77 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
SSU72Q9NP77 NXPH1-205ENST00000602349 1953 ntBASIC5.23□□□□□ -1.57
SSU72Q9NP77 AL353796.1-201ENST00000561542 3241 ntBASIC5.23□□□□□ -1.57
SSU72Q9NP77 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
SSU72Q9NP77 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
SSU72Q9NP77 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC5.23□□□□□ -1.57
SSU72Q9NP77 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC5.22□□□□□ -1.57
SSU72Q9NP77 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
SSU72Q9NP77 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC5.22□□□□□ -1.57
SSU72Q9NP77 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
SSU72Q9NP77 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
SSU72Q9NP77 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
SSU72Q9NP77 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC5.22□□□□□ -1.57
SSU72Q9NP77 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC5.22□□□□□ -1.57
SSU72Q9NP77 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
SSU72Q9NP77 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC5.22□□□□□ -1.57
SSU72Q9NP77 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC5.22□□□□□ -1.57
SSU72Q9NP77 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
SSU72Q9NP77 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
SSU72Q9NP77 RNU6-82P-201ENST00000363970 107 ntBASIC5.22□□□□□ -1.57
SSU72Q9NP77 RNU6-61P-201ENST00000365528 109 ntBASIC5.22□□□□□ -1.57
SSU72Q9NP77 RNU5E-6P-201ENST00000365574 115 ntBASIC5.22□□□□□ -1.57
SSU72Q9NP77 RNU4-2-201ENST00000365668 141 ntBASIC5.22□□□□□ -1.57
SSU72Q9NP77 RNU6-1032P-201ENST00000384100 107 ntBASIC5.22□□□□□ -1.57
SSU72Q9NP77 SNORA16A-201ENST00000384342 137 ntBASIC5.22□□□□□ -1.57
SSU72Q9NP77 SNORA24.1-201ENST00000384401 135 ntBASIC5.22□□□□□ -1.57
SSU72Q9NP77 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC5.22□□□□□ -1.57
SSU72Q9NP77 RN7SKP286-201ENST00000410894 299 ntBASIC5.22□□□□□ -1.57
SSU72Q9NP77 HMGB3P2-201ENST00000411913 584 ntBASIC5.22□□□□□ -1.57
SSU72Q9NP77 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC5.22□□□□□ -1.57
SSU72Q9NP77 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC5.22□□□□□ -1.57
SSU72Q9NP77 MCFD2P1-201ENST00000417812 300 ntBASIC5.22□□□□□ -1.57
SSU72Q9NP77 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC5.22□□□□□ -1.57
SSU72Q9NP77 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC5.22□□□□□ -1.57
SSU72Q9NP77 AL358176.3-201ENST00000420757 454 ntBASIC5.22□□□□□ -1.57
SSU72Q9NP77 ODF2-AS1-201ENST00000420801 407 ntTSL 3 BASIC5.22□□□□□ -1.57
SSU72Q9NP77 RPL36AP10-201ENST00000421785 322 ntBASIC5.22□□□□□ -1.57
SSU72Q9NP77 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC5.22□□□□□ -1.57
SSU72Q9NP77 AC127537.2-201ENST00000439258 465 ntBASIC5.22□□□□□ -1.57
SSU72Q9NP77 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC5.22□□□□□ -1.57
SSU72Q9NP77 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
SSU72Q9NP77 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC5.22□□□□□ -1.57
SSU72Q9NP77 AC016696.1-201ENST00000446949 318 ntBASIC5.22□□□□□ -1.57
SSU72Q9NP77 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC5.22□□□□□ -1.57
SSU72Q9NP77 AC108161.1-201ENST00000461060 402 ntBASIC5.22□□□□□ -1.57
SSU72Q9NP77 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC5.22□□□□□ -1.57
SSU72Q9NP77 AC021151.1-201ENST00000506933 183 ntTSL 3 BASIC5.22□□□□□ -1.57
SSU72Q9NP77 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC5.22□□□□□ -1.57
SSU72Q9NP77 RPL39P5-202ENST00000512505 151 ntBASIC5.22□□□□□ -1.57
SSU72Q9NP77 HAND2-AS1-235ENST00000515376 951 ntTSL 3 BASIC5.22□□□□□ -1.57
SSU72Q9NP77 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC5.22□□□□□ -1.57
SSU72Q9NP77 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC5.22□□□□□ -1.57
SSU72Q9NP77 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC5.22□□□□□ -1.57
SSU72Q9NP77 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC5.22□□□□□ -1.57
SSU72Q9NP77 AC022509.3-201ENST00000535914 436 ntTSL 3 BASIC5.22□□□□□ -1.57
SSU72Q9NP77 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC5.22□□□□□ -1.57
SSU72Q9NP77 AP000763.2-201ENST00000540641 163 ntBASIC5.22□□□□□ -1.57
SSU72Q9NP77 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
SSU72Q9NP77 OR11H5P-201ENST00000554039 926 ntBASIC5.22□□□□□ -1.57
SSU72Q9NP77 AL133153.1-201ENST00000557756 303 ntBASIC5.22□□□□□ -1.57
SSU72Q9NP77 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC5.22□□□□□ -1.57
SSU72Q9NP77 AC023043.2-201ENST00000589678 1026 ntBASIC5.22□□□□□ -1.57
SSU72Q9NP77 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC5.22□□□□□ -1.57
SSU72Q9NP77 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC5.22□□□□□ -1.57
SSU72Q9NP77 MUC1-221ENST00000610359 1101 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
SSU72Q9NP77 AL590099.1-201ENST00000615276 138 ntBASIC5.22□□□□□ -1.57
SSU72Q9NP77 MUC1-227ENST00000615517 951 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 11.3 ms