Protein–RNA interactions for Protein: Q9H9S3

SEC61A2, Protein transport protein Sec61 subunit alpha isoform 2, humanhuman

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2Q9H9S3 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
SEC61A2Q9H9S3 ATM-228ENST00000639240 498 ntTSL 5 BASIC4.55□□□□□ -1.68
SEC61A2Q9H9S3 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
SEC61A2Q9H9S3 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
SEC61A2Q9H9S3 ANAPC1P1-201ENST00000426186 2145 ntBASIC4.55□□□□□ -1.68
SEC61A2Q9H9S3 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC4.55□□□□□ -1.68
SEC61A2Q9H9S3 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC4.55□□□□□ -1.68
SEC61A2Q9H9S3 AC100778.3-201ENST00000580060 1750 ntBASIC4.55□□□□□ -1.68
SEC61A2Q9H9S3 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC4.55□□□□□ -1.68
SEC61A2Q9H9S3 OFD1P9Y-201ENST00000417699 1491 ntBASIC4.55□□□□□ -1.68
SEC61A2Q9H9S3 AP004289.2-201ENST00000444413 1457 ntBASIC4.55□□□□□ -1.68
SEC61A2Q9H9S3 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC4.55□□□□□ -1.68
SEC61A2Q9H9S3 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
SEC61A2Q9H9S3 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC4.55□□□□□ -1.68
SEC61A2Q9H9S3 MED23-203ENST00000368058 4576 ntTSL 5 BASIC4.55□□□□□ -1.68
SEC61A2Q9H9S3 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC4.54□□□□□ -1.68
SEC61A2Q9H9S3 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC4.54□□□□□ -1.68
SEC61A2Q9H9S3 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
SEC61A2Q9H9S3 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.54□□□□□ -1.68
SEC61A2Q9H9S3 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC4.54□□□□□ -1.68
SEC61A2Q9H9S3 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC4.54□□□□□ -1.68
SEC61A2Q9H9S3 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC4.54□□□□□ -1.68
SEC61A2Q9H9S3 AP005432.1-201ENST00000580891 3485 ntBASIC4.54□□□□□ -1.68
SEC61A2Q9H9S3 AC007342.5-201ENST00000571340 2142 ntBASIC4.54□□□□□ -1.68
SEC61A2Q9H9S3 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
SEC61A2Q9H9S3 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
SEC61A2Q9H9S3 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC4.54□□□□□ -1.68
SEC61A2Q9H9S3 RNU5E-8P-201ENST00000363502 116 ntBASIC4.54□□□□□ -1.68
SEC61A2Q9H9S3 RN7SKP113-201ENST00000363891 295 ntBASIC4.54□□□□□ -1.68
SEC61A2Q9H9S3 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC4.54□□□□□ -1.68
SEC61A2Q9H9S3 RNU6-606P-201ENST00000384721 111 ntBASIC4.54□□□□□ -1.68
SEC61A2Q9H9S3 MRM2-202ENST00000407040 582 ntTSL 3 BASIC4.54□□□□□ -1.68
SEC61A2Q9H9S3 RNU4-34P-201ENST00000410431 124 ntBASIC4.54□□□□□ -1.68
SEC61A2Q9H9S3 RN7SKP235-201ENST00000410662 305 ntBASIC4.54□□□□□ -1.68
SEC61A2Q9H9S3 RNU2-62P-201ENST00000410868 191 ntBASIC4.54□□□□□ -1.68
SEC61A2Q9H9S3 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC4.54□□□□□ -1.68
SEC61A2Q9H9S3 AC007738.1-201ENST00000413892 348 ntBASIC4.54□□□□□ -1.68
SEC61A2Q9H9S3 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
SEC61A2Q9H9S3 RPL31P45-201ENST00000419532 356 ntBASIC4.54□□□□□ -1.68
SEC61A2Q9H9S3 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC4.54□□□□□ -1.68
SEC61A2Q9H9S3 MTCO2P27-201ENST00000420740 428 ntBASIC4.54□□□□□ -1.68
SEC61A2Q9H9S3 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC4.54□□□□□ -1.68
SEC61A2Q9H9S3 HSPE1P1-201ENST00000421494 318 ntBASIC4.54□□□□□ -1.68
SEC61A2Q9H9S3 Z82205.1-201ENST00000428456 297 ntBASIC4.54□□□□□ -1.68
SEC61A2Q9H9S3 ERLEC1P1-201ENST00000433806 578 ntBASIC4.54□□□□□ -1.68
SEC61A2Q9H9S3 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC4.54□□□□□ -1.68
SEC61A2Q9H9S3 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC4.54□□□□□ -1.68
SEC61A2Q9H9S3 AC114495.1-201ENST00000441274 436 ntBASIC4.54□□□□□ -1.68
SEC61A2Q9H9S3 DDX3P2-201ENST00000446138 111 ntBASIC4.54□□□□□ -1.68
SEC61A2Q9H9S3 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC4.54□□□□□ -1.68
SEC61A2Q9H9S3 AL136126.1-201ENST00000473603 402 ntBASIC4.54□□□□□ -1.68
SEC61A2Q9H9S3 AL163540.1-201ENST00000485382 386 ntBASIC4.54□□□□□ -1.68
SEC61A2Q9H9S3 AC055855.1-201ENST00000489563 579 ntBASIC4.54□□□□□ -1.68
SEC61A2Q9H9S3 HSPD1P15-201ENST00000505573 1122 ntBASIC4.54□□□□□ -1.68
SEC61A2Q9H9S3 TXNP6-201ENST00000510190 310 ntBASIC4.54□□□□□ -1.68
SEC61A2Q9H9S3 AC005741.1-201ENST00000511094 432 ntBASIC4.54□□□□□ -1.68
SEC61A2Q9H9S3 CDV3-208ENST00000511392 554 ntTSL 5 BASIC4.54□□□□□ -1.68
SEC61A2Q9H9S3 AC114797.1-201ENST00000514003 728 ntBASIC4.54□□□□□ -1.68
SEC61A2Q9H9S3 AC105417.1-201ENST00000514691 285 ntBASIC4.54□□□□□ -1.68
SEC61A2Q9H9S3 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC4.54□□□□□ -1.68
SEC61A2Q9H9S3 AC103843.2-201ENST00000530523 682 ntBASIC4.54□□□□□ -1.68
SEC61A2Q9H9S3 OR10G5P-201ENST00000532733 358 ntBASIC4.54□□□□□ -1.68
SEC61A2Q9H9S3 AC024224.1-201ENST00000538284 609 ntBASIC4.54□□□□□ -1.68
SEC61A2Q9H9S3 AC024940.3-201ENST00000538551 316 ntBASIC4.54□□□□□ -1.68
SEC61A2Q9H9S3 DNAJC8P1-201ENST00000554535 372 ntBASIC4.54□□□□□ -1.68
SEC61A2Q9H9S3 AC051619.2-201ENST00000559063 397 ntBASIC4.54□□□□□ -1.68
SEC61A2Q9H9S3 RN7SL435P-201ENST00000584418 282 ntBASIC4.54□□□□□ -1.68
SEC61A2Q9H9S3 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC4.54□□□□□ -1.68
SEC61A2Q9H9S3 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC4.54□□□□□ -1.68
SEC61A2Q9H9S3 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC4.54□□□□□ -1.68
SEC61A2Q9H9S3 AC068790.3-201ENST00000602988 553 ntBASIC4.54□□□□□ -1.68
SEC61A2Q9H9S3 AC136443.5-201ENST00000603741 370 ntBASIC4.54□□□□□ -1.68
SEC61A2Q9H9S3 AP001330.4-201ENST00000604350 154 ntBASIC4.54□□□□□ -1.68
SEC61A2Q9H9S3 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC4.54□□□□□ -1.68
SEC61A2Q9H9S3 OR6R2P-201ENST00000609216 300 ntBASIC4.54□□□□□ -1.68
SEC61A2Q9H9S3 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC4.54□□□□□ -1.68
SEC61A2Q9H9S3 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC4.54□□□□□ -1.68
SEC61A2Q9H9S3 AL672167.1-204ENST00000641875 3017 ntBASIC4.54□□□□□ -1.68
SEC61A2Q9H9S3 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
SEC61A2Q9H9S3 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
SEC61A2Q9H9S3 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
SEC61A2Q9H9S3 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
SEC61A2Q9H9S3 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC4.53□□□□□ -1.68
SEC61A2Q9H9S3 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC4.53□□□□□ -1.68
SEC61A2Q9H9S3 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
SEC61A2Q9H9S3 MTND5P16-201ENST00000460269 1703 ntBASIC4.53□□□□□ -1.68
SEC61A2Q9H9S3 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
SEC61A2Q9H9S3 Y_RNA.145-201ENST00000363527 102 ntBASIC4.53□□□□□ -1.68
SEC61A2Q9H9S3 Y_RNA.146-201ENST00000363549 102 ntBASIC4.53□□□□□ -1.68
SEC61A2Q9H9S3 Y_RNA.367-201ENST00000365544 101 ntBASIC4.53□□□□□ -1.68
SEC61A2Q9H9S3 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
SEC61A2Q9H9S3 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
SEC61A2Q9H9S3 Y_RNA.445-201ENST00000384168 102 ntBASIC4.53□□□□□ -1.68
SEC61A2Q9H9S3 RNU6-574P-201ENST00000384265 107 ntBASIC4.53□□□□□ -1.68
SEC61A2Q9H9S3 RNU6-39P-201ENST00000384344 107 ntBASIC4.53□□□□□ -1.68
SEC61A2Q9H9S3 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
SEC61A2Q9H9S3 AL078599.1-201ENST00000402075 293 ntBASIC4.53□□□□□ -1.68
SEC61A2Q9H9S3 MIR1182-201ENST00000408363 97 ntBASIC4.53□□□□□ -1.68
SEC61A2Q9H9S3 RNU4-26P-201ENST00000410270 107 ntBASIC4.53□□□□□ -1.68
SEC61A2Q9H9S3 OR1AA1P-201ENST00000419597 916 ntBASIC4.53□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 144.9 ms