Protein–RNA interactions for Protein: Q9H0S4

DDX47, Probable ATP-dependent RNA helicase DDX47, humanhuman

Known RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX47Q9H0S4 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC3.49□□□□□ -1.85
DDX47Q9H0S4 MTND2P19-201ENST00000449129 1012 ntBASIC3.49□□□□□ -1.85
DDX47Q9H0S4 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC3.49□□□□□ -1.85
DDX47Q9H0S4 snoU13.4-201ENST00000458916 104 ntBASIC3.49□□□□□ -1.85
DDX47Q9H0S4 TAF8-207ENST00000482432 556 ntTSL 2 BASIC3.49□□□□□ -1.85
DDX47Q9H0S4 AC092185.1-201ENST00000491371 97 ntBASIC3.49□□□□□ -1.85
DDX47Q9H0S4 THAP6-203ENST00000502620 582 ntTSL 3 BASIC3.49□□□□□ -1.85
DDX47Q9H0S4 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC3.49□□□□□ -1.85
DDX47Q9H0S4 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC3.49□□□□□ -1.85
DDX47Q9H0S4 MTND4LP31-201ENST00000514859 294 ntBASIC3.49□□□□□ -1.85
DDX47Q9H0S4 IGKV3OR22-2-201ENST00000517943 313 ntBASIC3.49□□□□□ -1.85
DDX47Q9H0S4 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC3.49□□□□□ -1.85
DDX47Q9H0S4 AC087808.1-201ENST00000520501 361 ntBASIC3.49□□□□□ -1.85
DDX47Q9H0S4 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC3.49□□□□□ -1.85
DDX47Q9H0S4 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC3.49□□□□□ -1.85
DDX47Q9H0S4 CD69-203ENST00000536709 1020 ntTSL 2 BASIC3.49□□□□□ -1.85
DDX47Q9H0S4 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC3.49□□□□□ -1.85
DDX47Q9H0S4 TRAV37-201ENST00000553906 342 ntBASIC3.49□□□□□ -1.85
DDX47Q9H0S4 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC3.49□□□□□ -1.85
DDX47Q9H0S4 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC3.49□□□□□ -1.85
DDX47Q9H0S4 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC3.49□□□□□ -1.85
DDX47Q9H0S4 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC3.49□□□□□ -1.85
DDX47Q9H0S4 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC3.49□□□□□ -1.85
DDX47Q9H0S4 AC010591.1-201ENST00000603941 649 ntBASIC3.49□□□□□ -1.85
DDX47Q9H0S4 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.49□□□□□ -1.85
DDX47Q9H0S4 AC092650.2-201ENST00000619984 902 ntBASIC3.49□□□□□ -1.85
DDX47Q9H0S4 AC073476.4-201ENST00000628409 72 ntBASIC3.49□□□□□ -1.85
DDX47Q9H0S4 AC099654.8-201ENST00000637757 681 ntBASIC3.49□□□□□ -1.85
DDX47Q9H0S4 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.49□□□□□ -1.85
DDX47Q9H0S4 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC3.49□□□□□ -1.85
DDX47Q9H0S4 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.49□□□□□ -1.85
DDX47Q9H0S4 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.49□□□□□ -1.85
DDX47Q9H0S4 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.48□□□□□ -1.85
DDX47Q9H0S4 MTND5P27-201ENST00000428871 1720 ntBASIC3.48□□□□□ -1.85
DDX47Q9H0S4 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC3.48□□□□□ -1.85
DDX47Q9H0S4 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
DDX47Q9H0S4 RNU5D-1-201ENST00000363299 116 ntBASIC3.48□□□□□ -1.85
DDX47Q9H0S4 AL450338.1-201ENST00000407987 512 ntBASIC3.48□□□□□ -1.85
DDX47Q9H0S4 RN7SKP159-201ENST00000410657 292 ntBASIC3.48□□□□□ -1.85
DDX47Q9H0S4 RNU2-42P-201ENST00000410697 113 ntBASIC3.48□□□□□ -1.85
DDX47Q9H0S4 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC3.48□□□□□ -1.85
DDX47Q9H0S4 AL035423.1-201ENST00000420331 213 ntBASIC3.48□□□□□ -1.85
DDX47Q9H0S4 AC012065.2-201ENST00000421295 375 ntBASIC3.48□□□□□ -1.85
DDX47Q9H0S4 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC3.48□□□□□ -1.85
DDX47Q9H0S4 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
DDX47Q9H0S4 FTH1P1-201ENST00000437933 532 ntBASIC3.48□□□□□ -1.85
DDX47Q9H0S4 USP9YP22-201ENST00000438971 294 ntBASIC3.48□□□□□ -1.85
DDX47Q9H0S4 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC3.48□□□□□ -1.85
DDX47Q9H0S4 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC3.48□□□□□ -1.85
DDX47Q9H0S4 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC3.48□□□□□ -1.85
DDX47Q9H0S4 snoU109.4-201ENST00000458953 143 ntBASIC3.48□□□□□ -1.85
DDX47Q9H0S4 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC3.48□□□□□ -1.85
DDX47Q9H0S4 AC096751.1-202ENST00000502691 1067 ntBASIC3.48□□□□□ -1.85
DDX47Q9H0S4 AC112198.1-201ENST00000505369 1220 ntBASIC3.48□□□□□ -1.85
DDX47Q9H0S4 AC096571.1-202ENST00000506634 735 ntBASIC3.48□□□□□ -1.85
DDX47Q9H0S4 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC3.48□□□□□ -1.85
DDX47Q9H0S4 MTCYBP16-201ENST00000509187 1129 ntBASIC3.48□□□□□ -1.85
DDX47Q9H0S4 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC3.48□□□□□ -1.85
DDX47Q9H0S4 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC3.48□□□□□ -1.85
DDX47Q9H0S4 AC091163.3-201ENST00000518269 1144 ntBASIC3.48□□□□□ -1.85
DDX47Q9H0S4 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC3.48□□□□□ -1.85
DDX47Q9H0S4 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC3.48□□□□□ -1.85
DDX47Q9H0S4 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC3.48□□□□□ -1.85
DDX47Q9H0S4 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC3.48□□□□□ -1.85
DDX47Q9H0S4 YWHAZP1-201ENST00000556286 722 ntBASIC3.48□□□□□ -1.85
DDX47Q9H0S4 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC3.48□□□□□ -1.85
DDX47Q9H0S4 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC3.48□□□□□ -1.85
DDX47Q9H0S4 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC3.48□□□□□ -1.85
DDX47Q9H0S4 AC020914.6-201ENST00000594327 272 ntBASIC3.48□□□□□ -1.85
DDX47Q9H0S4 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC3.48□□□□□ -1.85
DDX47Q9H0S4 AL035411.2-201ENST00000604022 421 ntBASIC3.48□□□□□ -1.85
DDX47Q9H0S4 AC055876.5-201ENST00000605667 259 ntBASIC3.48□□□□□ -1.85
DDX47Q9H0S4 AC005332.6-201ENST00000613178 446 ntBASIC3.48□□□□□ -1.85
DDX47Q9H0S4 AL158163.2-201ENST00000619110 700 ntBASIC3.48□□□□□ -1.85
DDX47Q9H0S4 XIST_intron.1-201ENST00000619444 68 ntBASIC3.48□□□□□ -1.85
DDX47Q9H0S4 AC084824.4-201ENST00000620106 731 ntBASIC3.48□□□□□ -1.85
DDX47Q9H0S4 AC073348.1-201ENST00000623002 331 ntBASIC3.48□□□□□ -1.85
DDX47Q9H0S4 AC127502.3-201ENST00000636170 1206 ntBASIC3.48□□□□□ -1.85
DDX47Q9H0S4 U6.101-201ENST00000637707 76 ntBASIC3.48□□□□□ -1.85
DDX47Q9H0S4 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC3.48□□□□□ -1.85
DDX47Q9H0S4 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC3.48□□□□□ -1.85
DDX47Q9H0S4 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
DDX47Q9H0S4 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
DDX47Q9H0S4 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.48□□□□□ -1.85
DDX47Q9H0S4 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC3.47□□□□□ -1.85
DDX47Q9H0S4 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.47□□□□□ -1.85
DDX47Q9H0S4 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
DDX47Q9H0S4 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.47□□□□□ -1.85
DDX47Q9H0S4 AL672296.1-201ENST00000427780 2158 ntBASIC3.47□□□□□ -1.85
DDX47Q9H0S4 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
DDX47Q9H0S4 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
DDX47Q9H0S4 RNU5E-10P-201ENST00000363506 118 ntBASIC3.47□□□□□ -1.85
DDX47Q9H0S4 ESD-201ENST00000378697 1079 ntTSL 5 BASIC3.47□□□□□ -1.85
DDX47Q9H0S4 DEFB109C-201ENST00000382575 264 ntBASIC3.47□□□□□ -1.85
DDX47Q9H0S4 DEFB109B-201ENST00000382656 264 ntBASIC3.47□□□□□ -1.85
DDX47Q9H0S4 SNORA40.2-201ENST00000390847 128 ntBASIC3.47□□□□□ -1.85
DDX47Q9H0S4 RNA5SP129-201ENST00000410276 118 ntBASIC3.47□□□□□ -1.85
DDX47Q9H0S4 RN7SKP202-201ENST00000410439 330 ntBASIC3.47□□□□□ -1.85
DDX47Q9H0S4 AL161449.1-201ENST00000414531 1199 ntBASIC3.47□□□□□ -1.85
DDX47Q9H0S4 HMGB3P23-201ENST00000414981 585 ntBASIC3.47□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 91.3 ms