Protein–RNA interactions for Protein: Q9BYV2

TRIM54, Tripartite motif-containing protein 54, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54Q9BYV2 MIR708-201ENST00000390708 88 ntBASIC4.41□□□□□ -1.7
TRIM54Q9BYV2 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
TRIM54Q9BYV2 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC4.41□□□□□ -1.7
TRIM54Q9BYV2 AL359265.2-201ENST00000434367 631 ntBASIC4.41□□□□□ -1.7
TRIM54Q9BYV2 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
TRIM54Q9BYV2 MTATP6P13-201ENST00000438531 667 ntBASIC4.41□□□□□ -1.7
TRIM54Q9BYV2 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC4.41□□□□□ -1.7
TRIM54Q9BYV2 NANOGNBP1-201ENST00000448444 480 ntBASIC4.41□□□□□ -1.7
TRIM54Q9BYV2 GAPDHP17-201ENST00000449858 1001 ntBASIC4.41□□□□□ -1.7
TRIM54Q9BYV2 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC4.41□□□□□ -1.7
TRIM54Q9BYV2 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC4.41□□□□□ -1.7
TRIM54Q9BYV2 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC4.41□□□□□ -1.7
TRIM54Q9BYV2 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC4.41□□□□□ -1.7
TRIM54Q9BYV2 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC4.41□□□□□ -1.7
TRIM54Q9BYV2 TMEM248P1-201ENST00000510579 951 ntBASIC4.41□□□□□ -1.7
TRIM54Q9BYV2 CDV3-208ENST00000511392 554 ntTSL 5 BASIC4.41□□□□□ -1.7
TRIM54Q9BYV2 NPM1P41-201ENST00000512920 831 ntBASIC4.41□□□□□ -1.7
TRIM54Q9BYV2 Y_RNA.672-201ENST00000516289 104 ntBASIC4.41□□□□□ -1.7
TRIM54Q9BYV2 OR5G4P-201ENST00000525251 760 ntBASIC4.41□□□□□ -1.7
TRIM54Q9BYV2 DEFB108A-201ENST00000530110 222 ntBASIC4.41□□□□□ -1.7
TRIM54Q9BYV2 AP000907.2-201ENST00000530827 353 ntBASIC4.41□□□□□ -1.7
TRIM54Q9BYV2 AP003122.4-201ENST00000530980 758 ntBASIC4.41□□□□□ -1.7
TRIM54Q9BYV2 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC4.41□□□□□ -1.7
TRIM54Q9BYV2 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC4.41□□□□□ -1.7
TRIM54Q9BYV2 AC087883.1-201ENST00000551882 391 ntBASIC4.41□□□□□ -1.7
TRIM54Q9BYV2 AC136619.2-201ENST00000563361 631 ntBASIC4.41□□□□□ -1.7
TRIM54Q9BYV2 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC4.41□□□□□ -1.7
TRIM54Q9BYV2 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC4.41□□□□□ -1.7
TRIM54Q9BYV2 MTATP6P3-201ENST00000581686 676 ntBASIC4.41□□□□□ -1.7
TRIM54Q9BYV2 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC4.41□□□□□ -1.7
TRIM54Q9BYV2 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC4.41□□□□□ -1.7
TRIM54Q9BYV2 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC4.41□□□□□ -1.7
TRIM54Q9BYV2 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC4.41□□□□□ -1.7
TRIM54Q9BYV2 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC4.41□□□□□ -1.7
TRIM54Q9BYV2 DUXAP4-201ENST00000603046 613 ntBASIC4.41□□□□□ -1.7
TRIM54Q9BYV2 AL365503.1-201ENST00000605247 905 ntBASIC4.41□□□□□ -1.7
TRIM54Q9BYV2 AC138649.3-201ENST00000622154 254 ntBASIC4.41□□□□□ -1.7
TRIM54Q9BYV2 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC4.41□□□□□ -1.7
TRIM54Q9BYV2 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC4.41□□□□□ -1.7
TRIM54Q9BYV2 AC011460.1-201ENST00000636268 1834 ntBASIC4.41□□□□□ -1.7
TRIM54Q9BYV2 CPHL1P-201ENST00000461341 3407 ntBASIC4.41□□□□□ -1.7
TRIM54Q9BYV2 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC4.41□□□□□ -1.7
TRIM54Q9BYV2 AL133243.3-201ENST00000617415 3004 ntBASIC4.4□□□□□ -1.7
TRIM54Q9BYV2 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.7
TRIM54Q9BYV2 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.4□□□□□ -1.7
TRIM54Q9BYV2 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC4.4□□□□□ -1.7
TRIM54Q9BYV2 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
TRIM54Q9BYV2 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC4.4□□□□□ -1.7
TRIM54Q9BYV2 RNU6-263P-201ENST00000363811 107 ntBASIC4.4□□□□□ -1.71
TRIM54Q9BYV2 RNA5SP151-201ENST00000365632 117 ntBASIC4.4□□□□□ -1.71
TRIM54Q9BYV2 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
TRIM54Q9BYV2 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC4.4□□□□□ -1.71
TRIM54Q9BYV2 RN7SKP167-201ENST00000411047 285 ntBASIC4.4□□□□□ -1.71
TRIM54Q9BYV2 AC078974.1-201ENST00000411597 223 ntBASIC4.4□□□□□ -1.71
TRIM54Q9BYV2 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC4.4□□□□□ -1.71
TRIM54Q9BYV2 AMMECR1LP1-201ENST00000415152 841 ntBASIC4.4□□□□□ -1.71
TRIM54Q9BYV2 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC4.4□□□□□ -1.71
TRIM54Q9BYV2 AL391219.1-201ENST00000422570 483 ntBASIC4.4□□□□□ -1.71
TRIM54Q9BYV2 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC4.4□□□□□ -1.71
TRIM54Q9BYV2 AC009961.2-201ENST00000435771 251 ntBASIC4.4□□□□□ -1.71
TRIM54Q9BYV2 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC4.4□□□□□ -1.71
TRIM54Q9BYV2 AC011753.3-201ENST00000443436 406 ntBASIC4.4□□□□□ -1.71
TRIM54Q9BYV2 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC4.4□□□□□ -1.71
TRIM54Q9BYV2 AC104308.1-201ENST00000454621 333 ntBASIC4.4□□□□□ -1.71
TRIM54Q9BYV2 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC4.4□□□□□ -1.71
TRIM54Q9BYV2 AF213884.2-201ENST00000510417 903 ntBASIC4.4□□□□□ -1.71
TRIM54Q9BYV2 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC4.4□□□□□ -1.71
TRIM54Q9BYV2 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC4.4□□□□□ -1.71
TRIM54Q9BYV2 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC4.4□□□□□ -1.71
TRIM54Q9BYV2 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC4.4□□□□□ -1.71
TRIM54Q9BYV2 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC4.4□□□□□ -1.71
TRIM54Q9BYV2 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC4.4□□□□□ -1.71
TRIM54Q9BYV2 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC4.4□□□□□ -1.71
TRIM54Q9BYV2 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC4.4□□□□□ -1.71
TRIM54Q9BYV2 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC4.4□□□□□ -1.71
TRIM54Q9BYV2 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC4.4□□□□□ -1.71
TRIM54Q9BYV2 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC4.4□□□□□ -1.71
TRIM54Q9BYV2 AC060771.1-201ENST00000582031 164 ntBASIC4.4□□□□□ -1.71
TRIM54Q9BYV2 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC4.4□□□□□ -1.71
TRIM54Q9BYV2 VN1R79P-201ENST00000593540 513 ntBASIC4.4□□□□□ -1.71
TRIM54Q9BYV2 AC011451.2-201ENST00000604303 598 ntBASIC4.4□□□□□ -1.71
TRIM54Q9BYV2 AL161729.4-201ENST00000604650 476 ntBASIC4.4□□□□□ -1.71
TRIM54Q9BYV2 AC011816.2-201ENST00000607089 556 ntBASIC4.4□□□□□ -1.71
TRIM54Q9BYV2 AC073534.2-201ENST00000620377 381 ntBASIC4.4□□□□□ -1.71
TRIM54Q9BYV2 AP005019.3-201ENST00000620418 560 ntBASIC4.4□□□□□ -1.71
TRIM54Q9BYV2 AC006065.6-201ENST00000625201 545 ntBASIC4.4□□□□□ -1.71
TRIM54Q9BYV2 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC4.4□□□□□ -1.71
TRIM54Q9BYV2 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC4.4□□□□□ -1.71
TRIM54Q9BYV2 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
TRIM54Q9BYV2 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC4.4□□□□□ -1.71
TRIM54Q9BYV2 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.4□□□□□ -1.71
TRIM54Q9BYV2 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC4.4□□□□□ -1.71
TRIM54Q9BYV2 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC4.4□□□□□ -1.71
TRIM54Q9BYV2 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC4.4□□□□□ -1.71
TRIM54Q9BYV2 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC4.4□□□□□ -1.71
TRIM54Q9BYV2 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
TRIM54Q9BYV2 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
TRIM54Q9BYV2 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
TRIM54Q9BYV2 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
TRIM54Q9BYV2 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 79.9 ms