Protein–RNA interactions for Protein: Q9BYR4

KRTAP4-3, Keratin-associated protein 4-3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-3Q9BYR4 SNRPGP3-201ENST00000469405 227 ntBASIC2.04□□□□□ -2.08
KRTAP4-3Q9BYR4 RN7SL585P-201ENST00000470538 280 ntBASIC2.04□□□□□ -2.08
KRTAP4-3Q9BYR4 SNHG12-207ENST00000475441 444 ntTSL 3 BASIC2.04□□□□□ -2.08
KRTAP4-3Q9BYR4 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC2.04□□□□□ -2.08
KRTAP4-3Q9BYR4 AC146944.2-203ENST00000502493 354 ntBASIC2.04□□□□□ -2.08
KRTAP4-3Q9BYR4 USP17L23-201ENST00000506619 551 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
KRTAP4-3Q9BYR4 AC093259.1-201ENST00000509755 300 ntBASIC2.04□□□□□ -2.08
KRTAP4-3Q9BYR4 AC010343.2-201ENST00000510162 224 ntBASIC2.04□□□□□ -2.08
KRTAP4-3Q9BYR4 AC016559.2-201ENST00000510759 359 ntBASIC2.04□□□□□ -2.08
KRTAP4-3Q9BYR4 AC139495.1-202ENST00000513164 354 ntBASIC2.04□□□□□ -2.08
KRTAP4-3Q9BYR4 LINC01217-201ENST00000514427 562 ntTSL 4 BASIC2.04□□□□□ -2.08
KRTAP4-3Q9BYR4 RNA5SP362-201ENST00000516048 118 ntBASIC2.04□□□□□ -2.08
KRTAP4-3Q9BYR4 SNORA31.8-201ENST00000516327 108 ntBASIC2.04□□□□□ -2.08
KRTAP4-3Q9BYR4 RNA5SP271-201ENST00000516700 88 ntBASIC2.04□□□□□ -2.08
KRTAP4-3Q9BYR4 RN7SKP57-201ENST00000517248 293 ntBASIC2.04□□□□□ -2.08
KRTAP4-3Q9BYR4 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC2.04□□□□□ -2.08
KRTAP4-3Q9BYR4 CASC21-201ENST00000521586 290 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
KRTAP4-3Q9BYR4 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC2.04□□□□□ -2.08
KRTAP4-3Q9BYR4 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC2.04□□□□□ -2.08
KRTAP4-3Q9BYR4 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC2.04□□□□□ -2.08
KRTAP4-3Q9BYR4 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC2.04□□□□□ -2.08
KRTAP4-3Q9BYR4 ZNF585B-205ENST00000532828 6210 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
KRTAP4-3Q9BYR4 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC2.04□□□□□ -2.08
KRTAP4-3Q9BYR4 OCLN-205ENST00000538151 5391 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
KRTAP4-3Q9BYR4 NUP93-202ENST00000542526 8257 ntTSL 2 BASIC2.04□□□□□ -2.08
KRTAP4-3Q9BYR4 MYL6-213ENST00000549017 502 ntTSL 3 BASIC2.04□□□□□ -2.08
KRTAP4-3Q9BYR4 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC2.04□□□□□ -2.08
KRTAP4-3Q9BYR4 AL133240.1-201ENST00000553537 580 ntTSL 4 BASIC2.04□□□□□ -2.08
KRTAP4-3Q9BYR4 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC2.04□□□□□ -2.08
KRTAP4-3Q9BYR4 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC2.04□□□□□ -2.08
KRTAP4-3Q9BYR4 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC2.04□□□□□ -2.08
KRTAP4-3Q9BYR4 AC233699.1-201ENST00000569955 1168 ntBASIC2.04□□□□□ -2.08
KRTAP4-3Q9BYR4 MIR4666B-201ENST00000578142 81 ntBASIC2.04□□□□□ -2.08
KRTAP4-3Q9BYR4 MIR544B-201ENST00000582372 78 ntBASIC2.04□□□□□ -2.08
KRTAP4-3Q9BYR4 NBPF8-201ENST00000583271 5330 ntBASIC2.04□□□□□ -2.08
KRTAP4-3Q9BYR4 ZNF283-203ENST00000588797 2428 ntTSL 2 BASIC2.04□□□□□ -2.08
KRTAP4-3Q9BYR4 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC2.04□□□□□ -2.08
KRTAP4-3Q9BYR4 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC2.04□□□□□ -2.08
KRTAP4-3Q9BYR4 HCG18-243ENST00000602498 327 ntTSL 3 BASIC2.04□□□□□ -2.08
KRTAP4-3Q9BYR4 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC2.04□□□□□ -2.08
KRTAP4-3Q9BYR4 SNORD115-40-201ENST00000606510 82 ntBASIC2.04□□□□□ -2.08
KRTAP4-3Q9BYR4 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC2.04□□□□□ -2.08
KRTAP4-3Q9BYR4 AC004832.5-201ENST00000608677 401 ntBASIC2.04□□□□□ -2.08
KRTAP4-3Q9BYR4 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC2.04□□□□□ -2.08
KRTAP4-3Q9BYR4 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
KRTAP4-3Q9BYR4 MALAT1.1-201ENST00000618249 95 ntBASIC2.04□□□□□ -2.08
KRTAP4-3Q9BYR4 AC127024.6-201ENST00000621598 424 ntBASIC2.04□□□□□ -2.08
KRTAP4-3Q9BYR4 Metazoa_SRP.130-201ENST00000622625 267 ntBASIC2.04□□□□□ -2.08
KRTAP4-3Q9BYR4 AL031123.3-201ENST00000623345 1837 ntBASIC2.04□□□□□ -2.08
KRTAP4-3Q9BYR4 SF3B1-201ENST00000335508 6526 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
KRTAP4-3Q9BYR4 CHRM5-201ENST00000383263 5410 ntAPPRIS P1 TSL 2 BASIC2.04□□□□□ -2.08
KRTAP4-3Q9BYR4 REV3L-203ENST00000368805 10461 ntAPPRIS P1 TSL 5 BASIC2.04□□□□□ -2.08
KRTAP4-3Q9BYR4 TEX14-203ENST00000389934 4927 ntAPPRIS P4 TSL 1 (best) BASIC2.04□□□□□ -2.08
KRTAP4-3Q9BYR4 LARP1B-201ENST00000326639 4891 ntAPPRIS P1 TSL 5 BASIC2.04□□□□□ -2.08
KRTAP4-3Q9BYR4 CPNE3-203ENST00000517490 4865 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
KRTAP4-3Q9BYR4 NBPF12-205ENST00000617614 4630 ntTSL 5 BASIC2.04□□□□□ -2.08
KRTAP4-3Q9BYR4 TPD52-203ENST00000448733 4339 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
KRTAP4-3Q9BYR4 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC2.04□□□□□ -2.08
KRTAP4-3Q9BYR4 MDM4-215ENST00000614459 9782 ntTSL 5 BASIC2.04□□□□□ -2.08
KRTAP4-3Q9BYR4 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
KRTAP4-3Q9BYR4 ZNF566-202ENST00000424129 2644 ntAPPRIS P3 TSL 2 BASIC2.04□□□□□ -2.08
KRTAP4-3Q9BYR4 HSD17B4-202ENST00000414835 2551 ntTSL 2 BASIC2.04□□□□□ -2.08
KRTAP4-3Q9BYR4 PRDM2-202ENST00000311066 7437 ntAPPRIS ALT2 TSL 5 BASIC2.03□□□□□ -2.08
KRTAP4-3Q9BYR4 ARPP21-203ENST00000396482 2416 ntTSL 2 BASIC2.03□□□□□ -2.08
KRTAP4-3Q9BYR4 CYP19A1-202ENST00000396404 2388 ntAPPRIS P1 TSL 2 BASIC2.03□□□□□ -2.08
KRTAP4-3Q9BYR4 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
KRTAP4-3Q9BYR4 ZNF969P-201ENST00000510345 2341 ntBASIC2.03□□□□□ -2.08
KRTAP4-3Q9BYR4 SERPINB7-202ENST00000398019 2203 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
KRTAP4-3Q9BYR4 TBC1D32-201ENST00000275159 4431 ntAPPRIS ALT2 TSL 5 BASIC2.03□□□□□ -2.08
KRTAP4-3Q9BYR4 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
KRTAP4-3Q9BYR4 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
KRTAP4-3Q9BYR4 CASC19-204ENST00000641001 2055 ntBASIC2.03□□□□□ -2.08
KRTAP4-3Q9BYR4 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
KRTAP4-3Q9BYR4 NBEA-207ENST00000537702 4089 ntTSL 2 BASIC2.03□□□□□ -2.08
KRTAP4-3Q9BYR4 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC2.03□□□□□ -2.08
KRTAP4-3Q9BYR4 JAKMIP2-205ENST00000507386 5915 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
KRTAP4-3Q9BYR4 ARHGAP42P1-201ENST00000507474 1976 ntBASIC2.03□□□□□ -2.08
KRTAP4-3Q9BYR4 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
KRTAP4-3Q9BYR4 SRSF11-202ENST00000370950 3784 ntAPPRIS P3 TSL 1 (best) BASIC2.03□□□□□ -2.08
KRTAP4-3Q9BYR4 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
KRTAP4-3Q9BYR4 HSPA8P14-201ENST00000552265 1805 ntBASIC2.03□□□□□ -2.08
KRTAP4-3Q9BYR4 MCM8-201ENST00000265187 3442 ntAPPRIS ALT2 TSL 1 (best) BASIC2.03□□□□□ -2.08
KRTAP4-3Q9BYR4 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC2.03□□□□□ -2.08
KRTAP4-3Q9BYR4 GABRA3-204ENST00000535043 1697 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
KRTAP4-3Q9BYR4 PPARA-203ENST00000407236 9995 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
KRTAP4-3Q9BYR4 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
KRTAP4-3Q9BYR4 ZNF766-201ENST00000439461 6298 ntAPPRIS P2 TSL 1 (best) BASIC2.03□□□□□ -2.08
KRTAP4-3Q9BYR4 ATP6V1A-201ENST00000273398 4591 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
KRTAP4-3Q9BYR4 CD96-202ENST00000352690 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC2.03□□□□□ -2.08
KRTAP4-3Q9BYR4 PIK3CB-201ENST00000289153 5919 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
KRTAP4-3Q9BYR4 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
KRTAP4-3Q9BYR4 TRIP11-201ENST00000267622 9996 ntAPPRIS P2 TSL 1 (best) BASIC2.03□□□□□ -2.08
KRTAP4-3Q9BYR4 CFAP70-202ENST00000340329 1403 ntTSL 5 BASIC2.03□□□□□ -2.08
KRTAP4-3Q9BYR4 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
KRTAP4-3Q9BYR4 TRIM64-201ENST00000533122 2691 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
KRTAP4-3Q9BYR4 ZC3H7A-214ENST00000575984 2632 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
KRTAP4-3Q9BYR4 OR51E2-203ENST00000641638 2626 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
KRTAP4-3Q9BYR4 ESRRG-203ENST00000361395 5216 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
KRTAP4-3Q9BYR4 ESRRG-209ENST00000408911 5216 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
KRTAP4-3Q9BYR4 Y_RNA.7-201ENST00000362352 102 ntBASIC2.03□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 124.6 ms