Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 NAT1-209ENST00000541942 1948 ntAPPRIS P1 TSL 3 BASIC5.79□□□□□ -1.48
COL25A1Q9BXS0 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC5.79□□□□□ -1.48
COL25A1Q9BXS0 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC5.79□□□□□ -1.48
COL25A1Q9BXS0 LRRC49-204ENST00000544974 6605 ntTSL 2 BASIC5.79□□□□□ -1.48
COL25A1Q9BXS0 LINC01375-201ENST00000428485 1860 ntTSL 2 BASIC5.79□□□□□ -1.48
COL25A1Q9BXS0 TBC1D32-204ENST00000398212 3824 ntAPPRIS P2 TSL 5 BASIC5.79□□□□□ -1.48
COL25A1Q9BXS0 MYPN-202ENST00000358913 6013 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
COL25A1Q9BXS0 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC5.79□□□□□ -1.48
COL25A1Q9BXS0 CEACAM5-202ENST00000398599 2451 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
COL25A1Q9BXS0 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
COL25A1Q9BXS0 NBPF9-203ENST00000610300 2930 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
COL25A1Q9BXS0 RIOK2-202ENST00000508447 2149 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
COL25A1Q9BXS0 TLR10-207ENST00000613579 3801 ntAPPRIS P1 TSL 3 BASIC5.78□□□□□ -1.48
COL25A1Q9BXS0 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
COL25A1Q9BXS0 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC5.78□□□□□ -1.48
COL25A1Q9BXS0 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
COL25A1Q9BXS0 AL033543.1-201ENST00000623440 13454 ntBASIC5.78□□□□□ -1.48
COL25A1Q9BXS0 ADTRP-203ENST00000414691 2058 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
COL25A1Q9BXS0 LINC01204-202ENST00000435394 2214 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
COL25A1Q9BXS0 LINC01920-201ENST00000441356 2528 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
COL25A1Q9BXS0 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
COL25A1Q9BXS0 ANKRD12-201ENST00000262126 11288 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
COL25A1Q9BXS0 SYT4-201ENST00000255224 4110 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
COL25A1Q9BXS0 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC5.78□□□□□ -1.48
COL25A1Q9BXS0 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
COL25A1Q9BXS0 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
COL25A1Q9BXS0 MIR133B-201ENST00000362210 119 ntBASIC5.78□□□□□ -1.48
COL25A1Q9BXS0 RNU6-1266P-201ENST00000362794 105 ntBASIC5.78□□□□□ -1.48
COL25A1Q9BXS0 Y_RNA.333-201ENST00000365274 102 ntBASIC5.78□□□□□ -1.48
COL25A1Q9BXS0 RNU6-1207P-201ENST00000384343 107 ntBASIC5.78□□□□□ -1.48
COL25A1Q9BXS0 SNORD20-201ENST00000384550 80 ntBASIC5.78□□□□□ -1.48
COL25A1Q9BXS0 RNU6-959P-201ENST00000384671 107 ntBASIC5.78□□□□□ -1.48
COL25A1Q9BXS0 U3.20-201ENST00000390909 217 ntBASIC5.78□□□□□ -1.48
COL25A1Q9BXS0 RNU6-550P-201ENST00000391057 101 ntBASIC5.78□□□□□ -1.48
COL25A1Q9BXS0 Z95327.2-201ENST00000414579 1873 ntBASIC5.78□□□□□ -1.48
COL25A1Q9BXS0 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC5.78□□□□□ -1.48
COL25A1Q9BXS0 DUTP4-201ENST00000424782 475 ntBASIC5.78□□□□□ -1.48
COL25A1Q9BXS0 AC097713.2-201ENST00000430199 356 ntBASIC5.78□□□□□ -1.48
COL25A1Q9BXS0 AC091286.1-201ENST00000431233 461 ntBASIC5.78□□□□□ -1.48
COL25A1Q9BXS0 AC108734.1-201ENST00000439549 399 ntBASIC5.78□□□□□ -1.48
COL25A1Q9BXS0 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
COL25A1Q9BXS0 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC5.78□□□□□ -1.48
COL25A1Q9BXS0 NDUFB4P10-201ENST00000452541 359 ntBASIC5.78□□□□□ -1.48
COL25A1Q9BXS0 MTCO3P2-201ENST00000457365 171 ntBASIC5.78□□□□□ -1.48
COL25A1Q9BXS0 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC5.78□□□□□ -1.48
COL25A1Q9BXS0 AP000893.1-201ENST00000474462 794 ntBASIC5.78□□□□□ -1.48
COL25A1Q9BXS0 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC5.78□□□□□ -1.48
COL25A1Q9BXS0 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC5.78□□□□□ -1.48
COL25A1Q9BXS0 AKIRIN2P1-201ENST00000505898 352 ntBASIC5.78□□□□□ -1.48
COL25A1Q9BXS0 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC5.78□□□□□ -1.48
COL25A1Q9BXS0 LINC01217-201ENST00000514427 562 ntTSL 4 BASIC5.78□□□□□ -1.48
COL25A1Q9BXS0 RN7SKP98-201ENST00000517070 156 ntBASIC5.78□□□□□ -1.48
COL25A1Q9BXS0 PYDC2-201ENST00000518817 294 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
COL25A1Q9BXS0 FXNP1-201ENST00000555153 337 ntBASIC5.78□□□□□ -1.48
COL25A1Q9BXS0 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC5.78□□□□□ -1.48
COL25A1Q9BXS0 AP4E1-203ENST00000560508 6653 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
COL25A1Q9BXS0 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC5.78□□□□□ -1.48
COL25A1Q9BXS0 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC5.78□□□□□ -1.48
COL25A1Q9BXS0 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC5.78□□□□□ -1.48
COL25A1Q9BXS0 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC5.78□□□□□ -1.48
COL25A1Q9BXS0 AC008162.1-201ENST00000604718 254 ntBASIC5.78□□□□□ -1.48
COL25A1Q9BXS0 AL670379.4-201ENST00000605279 254 ntBASIC5.78□□□□□ -1.48
COL25A1Q9BXS0 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
COL25A1Q9BXS0 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC5.78□□□□□ -1.48
COL25A1Q9BXS0 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC5.78□□□□□ -1.48
COL25A1Q9BXS0 AL596275.2-208ENST00000641192 594 ntBASIC5.78□□□□□ -1.48
COL25A1Q9BXS0 GCNT2-203ENST00000379597 4525 ntAPPRIS ALT1 TSL 1 (best) BASIC5.78□□□□□ -1.48
COL25A1Q9BXS0 FAM216B-202ENST00000537894 3300 ntAPPRIS P1 TSL 4 BASIC5.78□□□□□ -1.48
COL25A1Q9BXS0 L3MBTL3-209ENST00000533560 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
COL25A1Q9BXS0 SP110-201ENST00000258381 2426 ntAPPRIS P4 TSL 2 BASIC5.78□□□□□ -1.48
COL25A1Q9BXS0 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
COL25A1Q9BXS0 AC099673.1-201ENST00000452199 2296 ntTSL 2 BASIC5.78□□□□□ -1.48
COL25A1Q9BXS0 CACNA1E-210ENST00000621791 16171 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
COL25A1Q9BXS0 TRIM38-201ENST00000357085 9413 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
COL25A1Q9BXS0 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC5.78□□□□□ -1.48
COL25A1Q9BXS0 CASP10-205ENST00000360132 5814 ntTSL 5 BASIC5.78□□□□□ -1.48
COL25A1Q9BXS0 NDRG3-203ENST00000373773 2098 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
COL25A1Q9BXS0 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
COL25A1Q9BXS0 IRF6-201ENST00000367021 4306 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
COL25A1Q9BXS0 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC5.77□□□□□ -1.48
COL25A1Q9BXS0 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC5.77□□□□□ -1.49
COL25A1Q9BXS0 ERLIN2-201ENST00000276461 6073 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
COL25A1Q9BXS0 RRS1-AS1-201ENST00000499642 4366 ntTSL 2 BASIC5.77□□□□□ -1.49
COL25A1Q9BXS0 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.49
COL25A1Q9BXS0 BDP1P-201ENST00000582658 1990 ntBASIC5.77□□□□□ -1.49
COL25A1Q9BXS0 HSPA8P1-201ENST00000425843 1833 ntBASIC5.77□□□□□ -1.49
COL25A1Q9BXS0 IMMTP1-201ENST00000435590 2219 ntBASIC5.77□□□□□ -1.49
COL25A1Q9BXS0 Y_RNA.8-201ENST00000362353 102 ntBASIC5.77□□□□□ -1.49
COL25A1Q9BXS0 RNU6-28P-201ENST00000362378 107 ntBASIC5.77□□□□□ -1.49
COL25A1Q9BXS0 RNA5SP478-201ENST00000364657 115 ntBASIC5.77□□□□□ -1.49
COL25A1Q9BXS0 Y_RNA.304-201ENST00000365011 112 ntBASIC5.77□□□□□ -1.49
COL25A1Q9BXS0 SNORA23-201ENST00000365128 182 ntBASIC5.77□□□□□ -1.49
COL25A1Q9BXS0 SNORA24.1-201ENST00000384401 135 ntBASIC5.77□□□□□ -1.49
COL25A1Q9BXS0 MIR215-201ENST00000384858 110 ntBASIC5.77□□□□□ -1.49
COL25A1Q9BXS0 RPLP0P7-201ENST00000416050 667 ntBASIC5.77□□□□□ -1.49
COL25A1Q9BXS0 RPL36AP6-201ENST00000435770 321 ntBASIC5.77□□□□□ -1.49
COL25A1Q9BXS0 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC5.77□□□□□ -1.49
COL25A1Q9BXS0 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC5.77□□□□□ -1.49
COL25A1Q9BXS0 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC5.77□□□□□ -1.49
COL25A1Q9BXS0 RNU7-27P-201ENST00000459281 62 ntBASIC5.77□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 95.5 ms