Protein–RNA interactions for Protein: Q9BSQ5

CCM2, Cerebral cavernous malformations 2 protein, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2Q9BSQ5 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC3.5□□□□□ -1.85
CCM2Q9BSQ5 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC3.5□□□□□ -1.85
CCM2Q9BSQ5 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
CCM2Q9BSQ5 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.5□□□□□ -1.85
CCM2Q9BSQ5 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.5□□□□□ -1.85
CCM2Q9BSQ5 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.5□□□□□ -1.85
CCM2Q9BSQ5 MFSD8-233ENST00000641482 4860 ntBASIC3.5□□□□□ -1.85
CCM2Q9BSQ5 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC3.5□□□□□ -1.85
CCM2Q9BSQ5 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
CCM2Q9BSQ5 AC007256.1-201ENST00000392253 2765 ntBASIC3.49□□□□□ -1.85
CCM2Q9BSQ5 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.49□□□□□ -1.85
CCM2Q9BSQ5 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.49□□□□□ -1.85
CCM2Q9BSQ5 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.49□□□□□ -1.85
CCM2Q9BSQ5 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.49□□□□□ -1.85
CCM2Q9BSQ5 Y_RNA.192-201ENST00000363977 102 ntBASIC3.49□□□□□ -1.85
CCM2Q9BSQ5 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
CCM2Q9BSQ5 MIR218-2-201ENST00000385006 110 ntBASIC3.49□□□□□ -1.85
CCM2Q9BSQ5 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
CCM2Q9BSQ5 EIF5P1-201ENST00000400019 1231 ntBASIC3.49□□□□□ -1.85
CCM2Q9BSQ5 MTND4LP20-201ENST00000402379 270 ntBASIC3.49□□□□□ -1.85
CCM2Q9BSQ5 AL024474.1-201ENST00000404655 591 ntBASIC3.49□□□□□ -1.85
CCM2Q9BSQ5 AP000567.1-201ENST00000406413 156 ntBASIC3.49□□□□□ -1.85
CCM2Q9BSQ5 AC127526.1-201ENST00000417526 366 ntBASIC3.49□□□□□ -1.85
CCM2Q9BSQ5 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC3.49□□□□□ -1.85
CCM2Q9BSQ5 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC3.49□□□□□ -1.85
CCM2Q9BSQ5 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC3.49□□□□□ -1.85
CCM2Q9BSQ5 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC3.49□□□□□ -1.85
CCM2Q9BSQ5 ATP5F1P1-201ENST00000433775 569 ntBASIC3.49□□□□□ -1.85
CCM2Q9BSQ5 AC084290.1-201ENST00000434995 374 ntBASIC3.49□□□□□ -1.85
CCM2Q9BSQ5 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC3.49□□□□□ -1.85
CCM2Q9BSQ5 AC127537.2-201ENST00000439258 465 ntBASIC3.49□□□□□ -1.85
CCM2Q9BSQ5 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC3.49□□□□□ -1.85
CCM2Q9BSQ5 VN1R34P-201ENST00000447387 883 ntBASIC3.49□□□□□ -1.85
CCM2Q9BSQ5 SLC31A1P1-201ENST00000451221 567 ntBASIC3.49□□□□□ -1.85
CCM2Q9BSQ5 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC3.49□□□□□ -1.85
CCM2Q9BSQ5 PABPC1P3-201ENST00000469174 459 ntBASIC3.49□□□□□ -1.85
CCM2Q9BSQ5 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC3.49□□□□□ -1.85
CCM2Q9BSQ5 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC3.49□□□□□ -1.85
CCM2Q9BSQ5 AC108078.3-201ENST00000502633 489 ntBASIC3.49□□□□□ -1.85
CCM2Q9BSQ5 AC110768.1-201ENST00000509222 400 ntBASIC3.49□□□□□ -1.85
CCM2Q9BSQ5 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC3.49□□□□□ -1.85
CCM2Q9BSQ5 AC116353.3-201ENST00000511215 249 ntBASIC3.49□□□□□ -1.85
CCM2Q9BSQ5 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC3.49□□□□□ -1.85
CCM2Q9BSQ5 SNORA70.18-201ENST00000516696 98 ntBASIC3.49□□□□□ -1.85
CCM2Q9BSQ5 CA1-215ENST00000522389 551 ntTSL 3 BASIC3.49□□□□□ -1.85
CCM2Q9BSQ5 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC3.49□□□□□ -1.85
CCM2Q9BSQ5 IGKV2D-19-201ENST00000523346 262 ntBASIC3.49□□□□□ -1.85
CCM2Q9BSQ5 OR5AP1P-201ENST00000529730 940 ntBASIC3.49□□□□□ -1.85
CCM2Q9BSQ5 AC103843.2-201ENST00000530523 682 ntBASIC3.49□□□□□ -1.85
CCM2Q9BSQ5 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC3.49□□□□□ -1.85
CCM2Q9BSQ5 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC3.49□□□□□ -1.85
CCM2Q9BSQ5 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC3.49□□□□□ -1.85
CCM2Q9BSQ5 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC3.49□□□□□ -1.85
CCM2Q9BSQ5 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
CCM2Q9BSQ5 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC3.49□□□□□ -1.85
CCM2Q9BSQ5 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.49□□□□□ -1.85
CCM2Q9BSQ5 AC008739.3-201ENST00000603262 127 ntBASIC3.49□□□□□ -1.85
CCM2Q9BSQ5 IGHV3-29-201ENST00000604817 344 ntBASIC3.49□□□□□ -1.85
CCM2Q9BSQ5 AC124312.4-201ENST00000605533 310 ntBASIC3.49□□□□□ -1.85
CCM2Q9BSQ5 AC034229.4-201ENST00000607861 441 ntBASIC3.49□□□□□ -1.85
CCM2Q9BSQ5 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC3.49□□□□□ -1.85
CCM2Q9BSQ5 AC073968.1-201ENST00000618594 637 ntBASIC3.49□□□□□ -1.85
CCM2Q9BSQ5 AC109809.1-201ENST00000619665 545 ntBASIC3.49□□□□□ -1.85
CCM2Q9BSQ5 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.49□□□□□ -1.85
CCM2Q9BSQ5 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC3.49□□□□□ -1.85
CCM2Q9BSQ5 AC120349.2-201ENST00000625002 298 ntBASIC3.49□□□□□ -1.85
CCM2Q9BSQ5 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.49□□□□□ -1.85
CCM2Q9BSQ5 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.49□□□□□ -1.85
CCM2Q9BSQ5 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
CCM2Q9BSQ5 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
CCM2Q9BSQ5 AL365440.1-201ENST00000436135 2167 ntBASIC3.49□□□□□ -1.85
CCM2Q9BSQ5 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
CCM2Q9BSQ5 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC3.49□□□□□ -1.85
CCM2Q9BSQ5 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.49□□□□□ -1.85
CCM2Q9BSQ5 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
CCM2Q9BSQ5 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC3.49□□□□□ -1.85
CCM2Q9BSQ5 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
CCM2Q9BSQ5 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
CCM2Q9BSQ5 RNA5SP295-201ENST00000362655 121 ntBASIC3.48□□□□□ -1.85
CCM2Q9BSQ5 RNU6-216P-201ENST00000363282 104 ntBASIC3.48□□□□□ -1.85
CCM2Q9BSQ5 RNA5SP235-201ENST00000365411 114 ntBASIC3.48□□□□□ -1.85
CCM2Q9BSQ5 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
CCM2Q9BSQ5 MIR506-201ENST00000384998 124 ntBASIC3.48□□□□□ -1.85
CCM2Q9BSQ5 TAF9BP1-201ENST00000396646 746 ntBASIC3.48□□□□□ -1.85
CCM2Q9BSQ5 ARF4P3-201ENST00000397387 509 ntBASIC3.48□□□□□ -1.85
CCM2Q9BSQ5 SLC9B1P2-201ENST00000398120 1184 ntBASIC3.48□□□□□ -1.85
CCM2Q9BSQ5 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.48□□□□□ -1.85
CCM2Q9BSQ5 RN7SKP53-201ENST00000411337 315 ntBASIC3.48□□□□□ -1.85
CCM2Q9BSQ5 RPS29P4-201ENST00000414733 161 ntBASIC3.48□□□□□ -1.85
CCM2Q9BSQ5 DBIP2-201ENST00000419076 262 ntBASIC3.48□□□□□ -1.85
CCM2Q9BSQ5 AC091286.1-201ENST00000431233 461 ntBASIC3.48□□□□□ -1.85
CCM2Q9BSQ5 AC092427.1-201ENST00000439177 601 ntBASIC3.48□□□□□ -1.85
CCM2Q9BSQ5 AC092641.1-201ENST00000440229 772 ntBASIC3.48□□□□□ -1.85
CCM2Q9BSQ5 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC3.48□□□□□ -1.85
CCM2Q9BSQ5 CR769776.1-201ENST00000441254 787 ntBASIC3.48□□□□□ -1.85
CCM2Q9BSQ5 RPL12P26-201ENST00000452430 487 ntBASIC3.48□□□□□ -1.85
CCM2Q9BSQ5 AC084357.1-201ENST00000473404 255 ntBASIC3.48□□□□□ -1.85
CCM2Q9BSQ5 RPS3AP50-201ENST00000487064 803 ntBASIC3.48□□□□□ -1.85
CCM2Q9BSQ5 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC3.48□□□□□ -1.85
CCM2Q9BSQ5 HMGB1P28-201ENST00000507778 552 ntBASIC3.48□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 81.2 ms