Protein–RNA interactions for Protein: Q9BQP9

BPIFA3, BPI fold-containing family A member 3, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BPIFA3Q9BQP9 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC3.21□□□□□ -1.9
BPIFA3Q9BQP9 AL606834.2-201ENST00000602954 668 ntBASIC3.21□□□□□ -1.9
BPIFA3Q9BQP9 OR4H6P-202ENST00000603819 340 ntBASIC3.21□□□□□ -1.9
BPIFA3Q9BQP9 AC090116.1-201ENST00000615679 446 ntBASIC3.21□□□□□ -1.9
BPIFA3Q9BQP9 AC006213.5-201ENST00000619673 288 ntBASIC3.21□□□□□ -1.9
BPIFA3Q9BQP9 AC018755.4-201ENST00000619715 454 ntBASIC3.21□□□□□ -1.9
BPIFA3Q9BQP9 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC3.21□□□□□ -1.9
BPIFA3Q9BQP9 AC132825.7-201ENST00000638744 335 ntBASIC3.21□□□□□ -1.9
BPIFA3Q9BQP9 AC092447.7-201ENST00000422212 1621 ntBASIC3.21□□□□□ -1.9
BPIFA3Q9BQP9 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
BPIFA3Q9BQP9 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
BPIFA3Q9BQP9 OR5BR1P-201ENST00000524992 1330 ntBASIC3.2□□□□□ -1.9
BPIFA3Q9BQP9 AC008432.1-201ENST00000615912 1320 ntBASIC3.2□□□□□ -1.9
BPIFA3Q9BQP9 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
BPIFA3Q9BQP9 RNU6-1249P-201ENST00000363237 111 ntBASIC3.2□□□□□ -1.9
BPIFA3Q9BQP9 RNU6-821P-201ENST00000390995 107 ntBASIC3.2□□□□□ -1.9
BPIFA3Q9BQP9 MTND4LP20-201ENST00000402379 270 ntBASIC3.2□□□□□ -1.9
BPIFA3Q9BQP9 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC3.2□□□□□ -1.9
BPIFA3Q9BQP9 VN1R42P-201ENST00000424651 344 ntBASIC3.2□□□□□ -1.9
BPIFA3Q9BQP9 AC005326.1-201ENST00000429197 123 ntBASIC3.2□□□□□ -1.9
BPIFA3Q9BQP9 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC3.2□□□□□ -1.9
BPIFA3Q9BQP9 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC3.2□□□□□ -1.9
BPIFA3Q9BQP9 RPL21P2-201ENST00000440049 481 ntBASIC3.2□□□□□ -1.9
BPIFA3Q9BQP9 AC002542.1-201ENST00000440683 193 ntBASIC3.2□□□□□ -1.9
BPIFA3Q9BQP9 AL691517.1-201ENST00000440833 1235 ntBASIC3.2□□□□□ -1.9
BPIFA3Q9BQP9 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC3.2□□□□□ -1.9
BPIFA3Q9BQP9 RPS26P30-201ENST00000443431 335 ntBASIC3.2□□□□□ -1.9
BPIFA3Q9BQP9 AL929288.2-201ENST00000446368 407 ntBASIC3.2□□□□□ -1.9
BPIFA3Q9BQP9 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC3.2□□□□□ -1.9
BPIFA3Q9BQP9 RPS26P21-201ENST00000475397 348 ntBASIC3.2□□□□□ -1.9
BPIFA3Q9BQP9 HMGN2P13-201ENST00000476476 274 ntBASIC3.2□□□□□ -1.9
BPIFA3Q9BQP9 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC3.2□□□□□ -1.9
BPIFA3Q9BQP9 SNORA76.2-201ENST00000517095 137 ntBASIC3.2□□□□□ -1.9
BPIFA3Q9BQP9 MTCO1P49-201ENST00000523429 802 ntBASIC3.2□□□□□ -1.9
BPIFA3Q9BQP9 CD69-203ENST00000536709 1020 ntTSL 2 BASIC3.2□□□□□ -1.9
BPIFA3Q9BQP9 AL157394.1-201ENST00000562983 1224 ntBASIC3.2□□□□□ -1.9
BPIFA3Q9BQP9 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.2□□□□□ -1.9
BPIFA3Q9BQP9 AC034268.2-201ENST00000571784 482 ntBASIC3.2□□□□□ -1.9
BPIFA3Q9BQP9 MIR3605-201ENST00000583214 100 ntBASIC3.2□□□□□ -1.9
BPIFA3Q9BQP9 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC3.2□□□□□ -1.9
BPIFA3Q9BQP9 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC3.2□□□□□ -1.9
BPIFA3Q9BQP9 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC3.2□□□□□ -1.9
BPIFA3Q9BQP9 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC3.2□□□□□ -1.9
BPIFA3Q9BQP9 AC016877.3-201ENST00000606778 504 ntBASIC3.2□□□□□ -1.9
BPIFA3Q9BQP9 AC004832.5-201ENST00000608677 401 ntBASIC3.2□□□□□ -1.9
BPIFA3Q9BQP9 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
BPIFA3Q9BQP9 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
BPIFA3Q9BQP9 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC3.2□□□□□ -1.9
BPIFA3Q9BQP9 MTND2P41-201ENST00000637599 773 ntBASIC3.2□□□□□ -1.9
BPIFA3Q9BQP9 AC096644.4-201ENST00000563417 2912 ntBASIC3.2□□□□□ -1.9
BPIFA3Q9BQP9 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
BPIFA3Q9BQP9 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC3.2□□□□□ -1.9
BPIFA3Q9BQP9 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
BPIFA3Q9BQP9 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC3.2□□□□□ -1.9
BPIFA3Q9BQP9 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
BPIFA3Q9BQP9 AL645568.2-201ENST00000432815 1337 ntBASIC3.19□□□□□ -1.9
BPIFA3Q9BQP9 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
BPIFA3Q9BQP9 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
BPIFA3Q9BQP9 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
BPIFA3Q9BQP9 RNU6-730P-201ENST00000383954 104 ntBASIC3.19□□□□□ -1.9
BPIFA3Q9BQP9 RNU6-921P-201ENST00000384361 107 ntBASIC3.19□□□□□ -1.9
BPIFA3Q9BQP9 RPL21P32-201ENST00000419877 477 ntBASIC3.19□□□□□ -1.9
BPIFA3Q9BQP9 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC3.19□□□□□ -1.9
BPIFA3Q9BQP9 SNRPEP4-201ENST00000435815 279 ntBASIC3.19□□□□□ -1.9
BPIFA3Q9BQP9 AC006028.1-201ENST00000438379 402 ntBASIC3.19□□□□□ -1.9
BPIFA3Q9BQP9 RNFT1P2-201ENST00000443064 757 ntBASIC3.19□□□□□ -1.9
BPIFA3Q9BQP9 RPL39P40-201ENST00000445481 146 ntBASIC3.19□□□□□ -1.9
BPIFA3Q9BQP9 MTND2P3-201ENST00000452458 470 ntBASIC3.19□□□□□ -1.9
BPIFA3Q9BQP9 AC104308.1-201ENST00000454621 333 ntBASIC3.19□□□□□ -1.9
BPIFA3Q9BQP9 AC003982.1-202ENST00000469928 248 ntBASIC3.19□□□□□ -1.9
BPIFA3Q9BQP9 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.19□□□□□ -1.9
BPIFA3Q9BQP9 AC068724.1-201ENST00000487100 792 ntBASIC3.19□□□□□ -1.9
BPIFA3Q9BQP9 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC3.19□□□□□ -1.9
BPIFA3Q9BQP9 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.19□□□□□ -1.9
BPIFA3Q9BQP9 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC3.19□□□□□ -1.9
BPIFA3Q9BQP9 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC3.19□□□□□ -1.9
BPIFA3Q9BQP9 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC3.19□□□□□ -1.9
BPIFA3Q9BQP9 AC107016.2-201ENST00000547968 190 ntBASIC3.19□□□□□ -1.9
BPIFA3Q9BQP9 LSM6P2-201ENST00000552208 177 ntBASIC3.19□□□□□ -1.9
BPIFA3Q9BQP9 BPTFP1-201ENST00000579209 492 ntBASIC3.19□□□□□ -1.9
BPIFA3Q9BQP9 AC025588.3-201ENST00000604182 274 ntBASIC3.19□□□□□ -1.9
BPIFA3Q9BQP9 AC073968.1-201ENST00000618594 637 ntBASIC3.19□□□□□ -1.9
BPIFA3Q9BQP9 AL356863.1-201ENST00000623378 1080 ntBASIC3.19□□□□□ -1.9
BPIFA3Q9BQP9 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC3.19□□□□□ -1.9
BPIFA3Q9BQP9 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC3.19□□□□□ -1.9
BPIFA3Q9BQP9 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
BPIFA3Q9BQP9 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.18□□□□□ -1.9
BPIFA3Q9BQP9 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.18□□□□□ -1.9
BPIFA3Q9BQP9 AC244517.1-201ENST00000606030 2086 ntBASIC3.18□□□□□ -1.9
BPIFA3Q9BQP9 AC024341.1-201ENST00000526444 1552 ntBASIC3.18□□□□□ -1.9
BPIFA3Q9BQP9 RNU6-989P-201ENST00000362756 107 ntBASIC3.18□□□□□ -1.9
BPIFA3Q9BQP9 RNA5-8SP4-201ENST00000365096 150 ntBASIC3.18□□□□□ -1.9
BPIFA3Q9BQP9 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
BPIFA3Q9BQP9 GSTA8P-201ENST00000404253 637 ntBASIC3.18□□□□□ -1.9
BPIFA3Q9BQP9 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
BPIFA3Q9BQP9 LINC02529-201ENST00000429657 772 ntTSL 3 BASIC3.18□□□□□ -1.9
BPIFA3Q9BQP9 GOT2P5-201ENST00000433995 546 ntBASIC3.18□□□□□ -1.9
BPIFA3Q9BQP9 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.18□□□□□ -1.9
BPIFA3Q9BQP9 SETP8-201ENST00000435341 628 ntBASIC3.18□□□□□ -1.9
BPIFA3Q9BQP9 AL513043.1-201ENST00000439124 535 ntBASIC3.18□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 104.8 ms