Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 SLC22A25-201ENST00000306494 1692 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
USB1Q9BQ65 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
USB1Q9BQ65 JPX-212ENST00000639185 9658 ntTSL 5 BASIC5.93□□□□□ -1.46
USB1Q9BQ65 APOL6-201ENST00000409652 10121 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
USB1Q9BQ65 GCNT2-203ENST00000379597 4525 ntAPPRIS ALT1 TSL 1 (best) BASIC5.93□□□□□ -1.46
USB1Q9BQ65 AC011504.1-201ENST00000623331 4103 ntBASIC5.93□□□□□ -1.46
USB1Q9BQ65 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC5.93□□□□□ -1.46
USB1Q9BQ65 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC5.93□□□□□ -1.46
USB1Q9BQ65 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
USB1Q9BQ65 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
USB1Q9BQ65 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC5.93□□□□□ -1.46
USB1Q9BQ65 LRRC37B-220ENST00000584368 2773 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
USB1Q9BQ65 DPYD-202ENST00000370192 4412 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
USB1Q9BQ65 ZNF138-204ENST00000437743 2574 ntAPPRIS ALT2 TSL 1 (best) BASIC5.93□□□□□ -1.46
USB1Q9BQ65 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC5.93□□□□□ -1.46
USB1Q9BQ65 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC5.93□□□□□ -1.46
USB1Q9BQ65 POLE2-206ENST00000554396 1581 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
USB1Q9BQ65 AC106038.1-201ENST00000501194 3473 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
USB1Q9BQ65 VPS13B-202ENST00000357162 14019 ntAPPRIS ALT1 TSL 1 (best) BASIC5.93□□□□□ -1.46
USB1Q9BQ65 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
USB1Q9BQ65 ZNF480-201ENST00000334564 1843 ntAPPRIS ALT2 TSL 2 BASIC5.92□□□□□ -1.46
USB1Q9BQ65 CX3CR1-202ENST00000399220 3106 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
USB1Q9BQ65 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
USB1Q9BQ65 CACNB4-229ENST00000636617 5757 ntTSL 5 BASIC5.92□□□□□ -1.46
USB1Q9BQ65 ZNF227-202ENST00000391961 2993 ntTSL 4 BASIC5.92□□□□□ -1.46
USB1Q9BQ65 AL034546.1-201ENST00000623740 3693 ntBASIC5.92□□□□□ -1.46
USB1Q9BQ65 AC062022.1-201ENST00000451026 1684 ntBASIC5.92□□□□□ -1.46
USB1Q9BQ65 GABRA2-215ENST00000540012 2588 ntTSL 5 BASIC5.92□□□□□ -1.46
USB1Q9BQ65 AC007785.2-201ENST00000598627 1916 ntBASIC5.92□□□□□ -1.46
USB1Q9BQ65 AHNAK2-201ENST00000333244 18254 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
USB1Q9BQ65 AC140134.1-201ENST00000511830 3544 ntBASIC5.92□□□□□ -1.46
USB1Q9BQ65 AC024587.1-201ENST00000505925 2157 ntBASIC5.92□□□□□ -1.46
USB1Q9BQ65 ZNF790-206ENST00000613249 2183 ntAPPRIS P1 TSL 4 BASIC5.92□□□□□ -1.46
USB1Q9BQ65 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC5.92□□□□□ -1.46
USB1Q9BQ65 RNU6-1290P-201ENST00000362957 109 ntBASIC5.92□□□□□ -1.46
USB1Q9BQ65 RNA5SP65-201ENST00000363166 119 ntBASIC5.92□□□□□ -1.46
USB1Q9BQ65 RNY4P28-201ENST00000365281 93 ntBASIC5.92□□□□□ -1.46
USB1Q9BQ65 RNY3P4-201ENST00000384428 101 ntBASIC5.92□□□□□ -1.46
USB1Q9BQ65 RNU6-1179P-201ENST00000384667 107 ntBASIC5.92□□□□□ -1.46
USB1Q9BQ65 MIR191-201ENST00000384873 92 ntBASIC5.92□□□□□ -1.46
USB1Q9BQ65 AL033519.2-201ENST00000403958 392 ntBASIC5.92□□□□□ -1.46
USB1Q9BQ65 MTCYBP2-201ENST00000407745 171 ntBASIC5.92□□□□□ -1.46
USB1Q9BQ65 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC5.92□□□□□ -1.46
USB1Q9BQ65 TRBV29OR9-2-201ENST00000427589 333 ntBASIC5.92□□□□□ -1.46
USB1Q9BQ65 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC5.92□□□□□ -1.46
USB1Q9BQ65 GAPDHP58-201ENST00000438477 1006 ntBASIC5.92□□□□□ -1.46
USB1Q9BQ65 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC5.92□□□□□ -1.46
USB1Q9BQ65 CYCSP51-201ENST00000443545 318 ntBASIC5.92□□□□□ -1.46
USB1Q9BQ65 RANP8-201ENST00000444720 713 ntBASIC5.92□□□□□ -1.46
USB1Q9BQ65 RPL7L1P1-201ENST00000448259 785 ntBASIC5.92□□□□□ -1.46
USB1Q9BQ65 BX276092.4-201ENST00000452056 248 ntBASIC5.92□□□□□ -1.46
USB1Q9BQ65 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC5.92□□□□□ -1.46
USB1Q9BQ65 RPL7P47-201ENST00000497299 556 ntBASIC5.92□□□□□ -1.46
USB1Q9BQ65 AC006296.1-201ENST00000514401 591 ntTSL 2 BASIC5.92□□□□□ -1.46
USB1Q9BQ65 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC5.92□□□□□ -1.46
USB1Q9BQ65 MYL2-203ENST00000548438 664 ntTSL 3 BASIC5.92□□□□□ -1.46
USB1Q9BQ65 GNG2-203ENST00000553432 577 ntTSL 4 BASIC5.92□□□□□ -1.46
USB1Q9BQ65 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC5.92□□□□□ -1.46
USB1Q9BQ65 AC026462.3-201ENST00000565153 557 ntTSL 2 BASIC5.92□□□□□ -1.46
USB1Q9BQ65 MIR3157-201ENST00000578688 85 ntBASIC5.92□□□□□ -1.46
USB1Q9BQ65 SNORA70D-201ENST00000578836 135 ntBASIC5.92□□□□□ -1.46
USB1Q9BQ65 PRPF19P1-201ENST00000584766 898 ntBASIC5.92□□□□□ -1.46
USB1Q9BQ65 AL078605.1-201ENST00000603529 500 ntBASIC5.92□□□□□ -1.46
USB1Q9BQ65 SNORD91B-202ENST00000608459 222 ntBASIC5.92□□□□□ -1.46
USB1Q9BQ65 MIR8076-201ENST00000611401 83 ntBASIC5.92□□□□□ -1.46
USB1Q9BQ65 AC239809.3-208ENST00000611452 531 ntTSL 5 BASIC5.92□□□□□ -1.46
USB1Q9BQ65 Six3os1_4.1-201ENST00000615706 324 ntBASIC5.92□□□□□ -1.46
USB1Q9BQ65 Metazoa_SRP.129-201ENST00000619776 251 ntBASIC5.92□□□□□ -1.46
USB1Q9BQ65 AL365265.1-201ENST00000621045 234 ntBASIC5.92□□□□□ -1.46
USB1Q9BQ65 CHORDC1-201ENST00000320585 2654 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
USB1Q9BQ65 AC005332.9-201ENST00000620266 2921 ntBASIC5.92□□□□□ -1.46
USB1Q9BQ65 BLOC1S2-206ENST00000618916 2470 ntTSL 5 BASIC5.92□□□□□ -1.46
USB1Q9BQ65 FAM208A-210ENST00000614531 3441 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
USB1Q9BQ65 AC097063.1-201ENST00000426714 1797 ntBASIC5.92□□□□□ -1.46
USB1Q9BQ65 AC138907.8-201ENST00000623981 2256 ntBASIC5.92□□□□□ -1.46
USB1Q9BQ65 DPH5-203ENST00000370109 1316 ntAPPRIS P4 TSL 1 (best) BASIC5.92□□□□□ -1.46
USB1Q9BQ65 AL022323.4-201ENST00000623980 13120 ntBASIC5.92□□□□□ -1.46
USB1Q9BQ65 MEIOC-202ENST00000409464 4067 ntAPPRIS ALT2 TSL 2 BASIC5.92□□□□□ -1.46
USB1Q9BQ65 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC5.92□□□□□ -1.46
USB1Q9BQ65 CNTN1-204ENST00000547849 3125 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
USB1Q9BQ65 OR2AT4-202ENST00000641504 8661 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
USB1Q9BQ65 AC093671.1-201ENST00000624981 2929 ntBASIC5.92□□□□□ -1.46
USB1Q9BQ65 MIR3681HG-201ENST00000412294 2183 ntTSL 2 BASIC5.91□□□□□ -1.46
USB1Q9BQ65 KIAA1109-201ENST00000264501 15896 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
USB1Q9BQ65 MDM4-217ENST00000621032 5592 ntTSL 2 BASIC5.91□□□□□ -1.46
USB1Q9BQ65 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC5.91□□□□□ -1.46
USB1Q9BQ65 NBPF12-205ENST00000617614 4630 ntTSL 5 BASIC5.91□□□□□ -1.46
USB1Q9BQ65 PCDH15-202ENST00000361849 7017 ntTSL 5 BASIC5.91□□□□□ -1.46
USB1Q9BQ65 PCDH15-205ENST00000373957 7032 ntTSL 5 BASIC5.91□□□□□ -1.46
USB1Q9BQ65 MBNL1-204ENST00000324210 5465 ntAPPRIS ALT1 TSL 1 (best) BASIC5.91□□□□□ -1.46
USB1Q9BQ65 PUM2-201ENST00000319801 6002 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
USB1Q9BQ65 KIAA1524-207ENST00000619684 2839 ntAPPRIS ALT1 TSL 5 BASIC5.91□□□□□ -1.46
USB1Q9BQ65 RARB-204ENST00000458646 2590 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
USB1Q9BQ65 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC5.91□□□□□ -1.46
USB1Q9BQ65 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC5.91□□□□□ -1.46
USB1Q9BQ65 MAGI2-235ENST00000637282 3174 ntTSL 5 BASIC5.91□□□□□ -1.46
USB1Q9BQ65 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
USB1Q9BQ65 TTC37-201ENST00000358746 5706 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
USB1Q9BQ65 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
USB1Q9BQ65 Y_RNA.44-201ENST00000362676 108 ntBASIC5.91□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 85.2 ms