Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 PISRT1-201ENST00000626175 531 ntBASIC4.83□□□□□ -1.64
CDK5RAP1Q96SZ6 MIR7641-1-201ENST00000627518 61 ntBASIC4.83□□□□□ -1.64
CDK5RAP1Q96SZ6 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CDK5RAP1Q96SZ6 ZNF33BP1-201ENST00000452497 1834 ntBASIC4.83□□□□□ -1.64
CDK5RAP1Q96SZ6 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC4.83□□□□□ -1.64
CDK5RAP1Q96SZ6 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC4.83□□□□□ -1.64
CDK5RAP1Q96SZ6 CCT8P1-201ENST00000413611 1657 ntBASIC4.83□□□□□ -1.64
CDK5RAP1Q96SZ6 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CDK5RAP1Q96SZ6 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
CDK5RAP1Q96SZ6 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC4.82□□□□□ -1.64
CDK5RAP1Q96SZ6 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC4.82□□□□□ -1.64
CDK5RAP1Q96SZ6 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CDK5RAP1Q96SZ6 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CDK5RAP1Q96SZ6 AC009313.2-201ENST00000417893 1941 ntBASIC4.82□□□□□ -1.64
CDK5RAP1Q96SZ6 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC4.82□□□□□ -1.64
CDK5RAP1Q96SZ6 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC4.82□□□□□ -1.64
CDK5RAP1Q96SZ6 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CDK5RAP1Q96SZ6 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CDK5RAP1Q96SZ6 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
CDK5RAP1Q96SZ6 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC4.82□□□□□ -1.64
CDK5RAP1Q96SZ6 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CDK5RAP1Q96SZ6 RNU6-474P-201ENST00000384243 107 ntBASIC4.82□□□□□ -1.64
CDK5RAP1Q96SZ6 RNA5SP332-201ENST00000391063 115 ntBASIC4.82□□□□□ -1.64
CDK5RAP1Q96SZ6 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CDK5RAP1Q96SZ6 AL080315.1-201ENST00000406055 466 ntBASIC4.82□□□□□ -1.64
CDK5RAP1Q96SZ6 VN1R8P-201ENST00000407739 893 ntBASIC4.82□□□□□ -1.64
CDK5RAP1Q96SZ6 Y_RNA.608-201ENST00000410647 95 ntBASIC4.82□□□□□ -1.64
CDK5RAP1Q96SZ6 FAR2P2-201ENST00000413041 594 ntBASIC4.82□□□□□ -1.64
CDK5RAP1Q96SZ6 SPA17P1-201ENST00000416656 452 ntBASIC4.82□□□□□ -1.64
CDK5RAP1Q96SZ6 AC004690.1-201ENST00000418216 328 ntBASIC4.82□□□□□ -1.64
CDK5RAP1Q96SZ6 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC4.82□□□□□ -1.64
CDK5RAP1Q96SZ6 FAR2P4-202ENST00000425399 584 ntBASIC4.82□□□□□ -1.64
CDK5RAP1Q96SZ6 AL589872.1-201ENST00000426602 288 ntBASIC4.82□□□□□ -1.64
CDK5RAP1Q96SZ6 SAR1AP4-201ENST00000429225 591 ntBASIC4.82□□□□□ -1.64
CDK5RAP1Q96SZ6 AC068287.1-201ENST00000430283 295 ntBASIC4.82□□□□□ -1.64
CDK5RAP1Q96SZ6 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC4.82□□□□□ -1.64
CDK5RAP1Q96SZ6 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC4.82□□□□□ -1.64
CDK5RAP1Q96SZ6 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC4.82□□□□□ -1.64
CDK5RAP1Q96SZ6 MTCO1P42-201ENST00000457379 726 ntBASIC4.82□□□□□ -1.64
CDK5RAP1Q96SZ6 snoU13.1-201ENST00000459157 104 ntBASIC4.82□□□□□ -1.64
CDK5RAP1Q96SZ6 Y_RNA.632-201ENST00000459189 102 ntBASIC4.82□□□□□ -1.64
CDK5RAP1Q96SZ6 AC022795.1-201ENST00000473808 480 ntBASIC4.82□□□□□ -1.64
CDK5RAP1Q96SZ6 RPL35P6-201ENST00000490024 372 ntBASIC4.82□□□□□ -1.64
CDK5RAP1Q96SZ6 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC4.82□□□□□ -1.64
CDK5RAP1Q96SZ6 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC4.82□□□□□ -1.64
CDK5RAP1Q96SZ6 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC4.82□□□□□ -1.64
CDK5RAP1Q96SZ6 AC015795.1-201ENST00000513669 327 ntBASIC4.82□□□□□ -1.64
CDK5RAP1Q96SZ6 RNU7-30P-201ENST00000516835 62 ntBASIC4.82□□□□□ -1.64
CDK5RAP1Q96SZ6 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC4.82□□□□□ -1.64
CDK5RAP1Q96SZ6 HSPA8P13-201ENST00000523715 472 ntBASIC4.82□□□□□ -1.64
CDK5RAP1Q96SZ6 AP002812.4-201ENST00000532139 286 ntBASIC4.82□□□□□ -1.64
CDK5RAP1Q96SZ6 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC4.82□□□□□ -1.64
CDK5RAP1Q96SZ6 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC4.82□□□□□ -1.64
CDK5RAP1Q96SZ6 AC068714.1-201ENST00000559623 800 ntBASIC4.82□□□□□ -1.64
CDK5RAP1Q96SZ6 AC093249.1-201ENST00000567049 203 ntBASIC4.82□□□□□ -1.64
CDK5RAP1Q96SZ6 AC209154.1-201ENST00000582156 337 ntBASIC4.82□□□□□ -1.64
CDK5RAP1Q96SZ6 MIR544B-201ENST00000582372 78 ntBASIC4.82□□□□□ -1.64
CDK5RAP1Q96SZ6 MIR5096-201ENST00000583713 70 ntBASIC4.82□□□□□ -1.64
CDK5RAP1Q96SZ6 AC007687.1-201ENST00000602704 304 ntBASIC4.82□□□□□ -1.64
CDK5RAP1Q96SZ6 AC116447.1-201ENST00000613153 453 ntBASIC4.82□□□□□ -1.64
CDK5RAP1Q96SZ6 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC4.82□□□□□ -1.64
CDK5RAP1Q96SZ6 AL713922.2-201ENST00000619384 716 ntBASIC4.82□□□□□ -1.64
CDK5RAP1Q96SZ6 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CDK5RAP1Q96SZ6 AL596275.2-204ENST00000641628 552 ntBASIC4.82□□□□□ -1.64
CDK5RAP1Q96SZ6 AL596275.2-206ENST00000641957 626 ntBASIC4.82□□□□□ -1.64
CDK5RAP1Q96SZ6 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CDK5RAP1Q96SZ6 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CDK5RAP1Q96SZ6 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CDK5RAP1Q96SZ6 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC4.82□□□□□ -1.64
CDK5RAP1Q96SZ6 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CDK5RAP1Q96SZ6 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC4.82□□□□□ -1.64
CDK5RAP1Q96SZ6 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CDK5RAP1Q96SZ6 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
CDK5RAP1Q96SZ6 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC4.81□□□□□ -1.64
CDK5RAP1Q96SZ6 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
CDK5RAP1Q96SZ6 MTND5P1-201ENST00000445440 1375 ntBASIC4.81□□□□□ -1.64
CDK5RAP1Q96SZ6 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC4.81□□□□□ -1.64
CDK5RAP1Q96SZ6 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC4.81□□□□□ -1.64
CDK5RAP1Q96SZ6 Y_RNA.184-201ENST00000363884 108 ntBASIC4.81□□□□□ -1.64
CDK5RAP1Q96SZ6 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
CDK5RAP1Q96SZ6 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
CDK5RAP1Q96SZ6 GLULP6-201ENST00000399502 913 ntBASIC4.81□□□□□ -1.64
CDK5RAP1Q96SZ6 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC4.81□□□□□ -1.64
CDK5RAP1Q96SZ6 AL450992.3-201ENST00000413192 568 ntBASIC4.81□□□□□ -1.64
CDK5RAP1Q96SZ6 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC4.81□□□□□ -1.64
CDK5RAP1Q96SZ6 RPL6P29-201ENST00000414863 865 ntBASIC4.81□□□□□ -1.64
CDK5RAP1Q96SZ6 TRAPPC2P10-201ENST00000415662 323 ntBASIC4.81□□□□□ -1.64
CDK5RAP1Q96SZ6 AL807761.1-201ENST00000417622 171 ntBASIC4.81□□□□□ -1.64
CDK5RAP1Q96SZ6 AL035410.1-201ENST00000427409 427 ntBASIC4.81□□□□□ -1.64
CDK5RAP1Q96SZ6 AC073335.1-201ENST00000427776 363 ntBASIC4.81□□□□□ -1.64
CDK5RAP1Q96SZ6 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC4.81□□□□□ -1.64
CDK5RAP1Q96SZ6 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC4.81□□□□□ -1.64
CDK5RAP1Q96SZ6 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC4.81□□□□□ -1.64
CDK5RAP1Q96SZ6 HMGB3P12-201ENST00000438745 556 ntBASIC4.81□□□□□ -1.64
CDK5RAP1Q96SZ6 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC4.81□□□□□ -1.64
CDK5RAP1Q96SZ6 BX248409.1-201ENST00000455497 255 ntBASIC4.81□□□□□ -1.64
CDK5RAP1Q96SZ6 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CDK5RAP1Q96SZ6 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC4.81□□□□□ -1.64
CDK5RAP1Q96SZ6 TRBV8-2-201ENST00000475637 270 ntBASIC4.81□□□□□ -1.64
CDK5RAP1Q96SZ6 AC021146.2-201ENST00000504736 556 ntBASIC4.81□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 147.1 ms