Protein–RNA interactions for Protein: Q96M89

CCDC138, Coiled-coil domain-containing protein 138, humanhuman

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC138Q96M89 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC4.37□□□□□ -1.71
CCDC138Q96M89 MIR548AB-201ENST00000584917 84 ntBASIC4.37□□□□□ -1.71
CCDC138Q96M89 AC008759.1-201ENST00000589783 983 ntBASIC4.37□□□□□ -1.71
CCDC138Q96M89 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC4.37□□□□□ -1.71
CCDC138Q96M89 AC090181.2-201ENST00000602975 672 ntBASIC4.37□□□□□ -1.71
CCDC138Q96M89 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC4.37□□□□□ -1.71
CCDC138Q96M89 AL158211.4-201ENST00000606988 584 ntBASIC4.37□□□□□ -1.71
CCDC138Q96M89 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC4.37□□□□□ -1.71
CCDC138Q96M89 MESTIT1_2.1-201ENST00000616328 235 ntBASIC4.37□□□□□ -1.71
CCDC138Q96M89 RN7SL722P-201ENST00000617780 284 ntBASIC4.37□□□□□ -1.71
CCDC138Q96M89 RN7SL565P-201ENST00000618246 284 ntBASIC4.37□□□□□ -1.71
CCDC138Q96M89 AC015967.1-201ENST00000619893 476 ntBASIC4.37□□□□□ -1.71
CCDC138Q96M89 AP005019.3-201ENST00000620418 560 ntBASIC4.37□□□□□ -1.71
CCDC138Q96M89 MIR4727-201ENST00000622232 55 ntBASIC4.37□□□□□ -1.71
CCDC138Q96M89 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC4.37□□□□□ -1.71
CCDC138Q96M89 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC4.37□□□□□ -1.71
CCDC138Q96M89 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC4.37□□□□□ -1.71
CCDC138Q96M89 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
CCDC138Q96M89 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC4.37□□□□□ -1.71
CCDC138Q96M89 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC4.37□□□□□ -1.71
CCDC138Q96M89 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
CCDC138Q96M89 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
CCDC138Q96M89 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
CCDC138Q96M89 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
CCDC138Q96M89 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
CCDC138Q96M89 SNORA51.2-201ENST00000364595 132 ntBASIC4.36□□□□□ -1.71
CCDC138Q96M89 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC4.36□□□□□ -1.71
CCDC138Q96M89 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC4.36□□□□□ -1.71
CCDC138Q96M89 MIR192-201ENST00000384915 110 ntBASIC4.36□□□□□ -1.71
CCDC138Q96M89 MTND1P21-201ENST00000412991 285 ntBASIC4.36□□□□□ -1.71
CCDC138Q96M89 SLC44A3-AS1-205ENST00000424505 612 ntBASIC4.36□□□□□ -1.71
CCDC138Q96M89 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC4.36□□□□□ -1.71
CCDC138Q96M89 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC4.36□□□□□ -1.71
CCDC138Q96M89 RPL22P17-201ENST00000438729 315 ntBASIC4.36□□□□□ -1.71
CCDC138Q96M89 AC114495.1-201ENST00000441274 436 ntBASIC4.36□□□□□ -1.71
CCDC138Q96M89 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC4.36□□□□□ -1.71
CCDC138Q96M89 RPS17P13-201ENST00000448974 407 ntBASIC4.36□□□□□ -1.71
CCDC138Q96M89 USP9YP12-201ENST00000450481 570 ntBASIC4.36□□□□□ -1.71
CCDC138Q96M89 NDUFA12P1-201ENST00000455914 406 ntBASIC4.36□□□□□ -1.71
CCDC138Q96M89 SNRPGP5-201ENST00000456003 220 ntBASIC4.36□□□□□ -1.71
CCDC138Q96M89 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC4.36□□□□□ -1.71
CCDC138Q96M89 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC4.36□□□□□ -1.71
CCDC138Q96M89 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC4.36□□□□□ -1.71
CCDC138Q96M89 AC146944.2-203ENST00000502493 354 ntBASIC4.36□□□□□ -1.71
CCDC138Q96M89 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC4.36□□□□□ -1.71
CCDC138Q96M89 AC139495.1-202ENST00000513164 354 ntBASIC4.36□□□□□ -1.71
CCDC138Q96M89 RNU6-1073P-201ENST00000517182 106 ntBASIC4.36□□□□□ -1.71
CCDC138Q96M89 AC007115.1-201ENST00000546853 234 ntBASIC4.36□□□□□ -1.71
CCDC138Q96M89 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC4.36□□□□□ -1.71
CCDC138Q96M89 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC4.36□□□□□ -1.71
CCDC138Q96M89 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC4.36□□□□□ -1.71
CCDC138Q96M89 MIR4330-201ENST00000579077 105 ntBASIC4.36□□□□□ -1.71
CCDC138Q96M89 UBE2L4-201ENST00000587688 464 ntBASIC4.36□□□□□ -1.71
CCDC138Q96M89 AC245008.1-201ENST00000608123 476 ntBASIC4.36□□□□□ -1.71
CCDC138Q96M89 OR10AB1P-201ENST00000609613 938 ntBASIC4.36□□□□□ -1.71
CCDC138Q96M89 AL353748.2-201ENST00000622148 471 ntBASIC4.36□□□□□ -1.71
CCDC138Q96M89 AL158801.5-201ENST00000623123 465 ntBASIC4.36□□□□□ -1.71
CCDC138Q96M89 AC006065.6-201ENST00000625201 545 ntBASIC4.36□□□□□ -1.71
CCDC138Q96M89 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
CCDC138Q96M89 AC139713.2-214ENST00000642059 1811 ntBASIC4.36□□□□□ -1.71
CCDC138Q96M89 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
CCDC138Q96M89 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
CCDC138Q96M89 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
CCDC138Q96M89 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
CCDC138Q96M89 AL390237.1-201ENST00000404226 1415 ntBASIC4.36□□□□□ -1.71
CCDC138Q96M89 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC4.36□□□□□ -1.71
CCDC138Q96M89 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
CCDC138Q96M89 OR56B2P-202ENST00000641377 2453 ntBASIC4.35□□□□□ -1.71
CCDC138Q96M89 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC4.35□□□□□ -1.71
CCDC138Q96M89 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
CCDC138Q96M89 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC4.35□□□□□ -1.71
CCDC138Q96M89 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
CCDC138Q96M89 FGF7P2-201ENST00000332473 296 ntBASIC4.35□□□□□ -1.71
CCDC138Q96M89 Y_RNA.46-201ENST00000362695 102 ntBASIC4.35□□□□□ -1.71
CCDC138Q96M89 RNU1-44P-201ENST00000384453 163 ntBASIC4.35□□□□□ -1.71
CCDC138Q96M89 MIR513A2-201ENST00000385249 127 ntBASIC4.35□□□□□ -1.71
CCDC138Q96M89 RPS3AP23-201ENST00000401762 784 ntBASIC4.35□□□□□ -1.71
CCDC138Q96M89 AL356583.2-201ENST00000426536 280 ntBASIC4.35□□□□□ -1.71
CCDC138Q96M89 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC4.35□□□□□ -1.71
CCDC138Q96M89 ARL2BPP10-201ENST00000446487 531 ntBASIC4.35□□□□□ -1.71
CCDC138Q96M89 MTND1P29-201ENST00000448112 647 ntBASIC4.35□□□□□ -1.71
CCDC138Q96M89 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC4.35□□□□□ -1.71
CCDC138Q96M89 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC4.35□□□□□ -1.71
CCDC138Q96M89 MTND2P28-201ENST00000457540 1044 ntBASIC4.35□□□□□ -1.71
CCDC138Q96M89 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC4.35□□□□□ -1.71
CCDC138Q96M89 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC4.35□□□□□ -1.71
CCDC138Q96M89 AC111000.3-201ENST00000508057 576 ntBASIC4.35□□□□□ -1.71
CCDC138Q96M89 KLHL2P1-201ENST00000508691 521 ntBASIC4.35□□□□□ -1.71
CCDC138Q96M89 AC004062.1-201ENST00000509926 645 ntBASIC4.35□□□□□ -1.71
CCDC138Q96M89 AC021146.1-201ENST00000511202 716 ntBASIC4.35□□□□□ -1.71
CCDC138Q96M89 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC4.35□□□□□ -1.71
CCDC138Q96M89 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC4.35□□□□□ -1.71
CCDC138Q96M89 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC4.35□□□□□ -1.71
CCDC138Q96M89 AC084783.1-201ENST00000565846 910 ntBASIC4.35□□□□□ -1.71
CCDC138Q96M89 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC4.35□□□□□ -1.71
CCDC138Q96M89 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC4.35□□□□□ -1.71
CCDC138Q96M89 AC119751.7-201ENST00000600494 245 ntBASIC4.35□□□□□ -1.71
CCDC138Q96M89 AC068790.4-201ENST00000602474 263 ntBASIC4.35□□□□□ -1.71
CCDC138Q96M89 RN7SKP299-201ENST00000606679 301 ntBASIC4.35□□□□□ -1.71
CCDC138Q96M89 AC064807.4-201ENST00000607201 407 ntBASIC4.35□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 79.9 ms