Protein–RNA interactions for Protein: Q96LT7

C9orf72, Guanine nucleotide exchange C9orf72, humanhuman

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf72Q96LT7 SAR1AP2-201ENST00000392696 594 ntBASIC3.1□□□□□ -1.91
C9orf72Q96LT7 RNA5SP56-201ENST00000410277 118 ntBASIC3.1□□□□□ -1.91
C9orf72Q96LT7 AL158825.1-201ENST00000414735 521 ntBASIC3.1□□□□□ -1.91
C9orf72Q96LT7 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC3.1□□□□□ -1.91
C9orf72Q96LT7 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.1□□□□□ -1.91
C9orf72Q96LT7 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC3.1□□□□□ -1.91
C9orf72Q96LT7 NPM1P13-201ENST00000452663 865 ntBASIC3.1□□□□□ -1.91
C9orf72Q96LT7 RPL21P18-201ENST00000469899 480 ntBASIC3.1□□□□□ -1.91
C9orf72Q96LT7 AL024509.2-201ENST00000493462 493 ntBASIC3.1□□□□□ -1.91
C9orf72Q96LT7 HIGD1AP6-201ENST00000521833 279 ntBASIC3.1□□□□□ -1.91
C9orf72Q96LT7 AP003385.6-201ENST00000531603 374 ntBASIC3.1□□□□□ -1.91
C9orf72Q96LT7 AC004217.3-201ENST00000551552 878 ntBASIC3.1□□□□□ -1.91
C9orf72Q96LT7 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC3.1□□□□□ -1.91
C9orf72Q96LT7 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC3.1□□□□□ -1.91
C9orf72Q96LT7 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC3.1□□□□□ -1.91
C9orf72Q96LT7 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC3.1□□□□□ -1.91
C9orf72Q96LT7 AL669831.4-202ENST00000590817 238 ntBASIC3.1□□□□□ -1.91
C9orf72Q96LT7 AF131215.7-201ENST00000602443 707 ntBASIC3.1□□□□□ -1.91
C9orf72Q96LT7 AC025588.3-201ENST00000604182 274 ntBASIC3.1□□□□□ -1.91
C9orf72Q96LT7 BNIP3P4-201ENST00000604946 565 ntBASIC3.1□□□□□ -1.91
C9orf72Q96LT7 AC100814.1-201ENST00000606963 623 ntBASIC3.1□□□□□ -1.91
C9orf72Q96LT7 AL513477.2-201ENST00000607858 568 ntBASIC3.1□□□□□ -1.91
C9orf72Q96LT7 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC3.1□□□□□ -1.91
C9orf72Q96LT7 AL162274.2-201ENST00000614406 332 ntBASIC3.1□□□□□ -1.91
C9orf72Q96LT7 STATH-208ENST00000615994 598 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
C9orf72Q96LT7 RMST_10.1-201ENST00000616309 154 ntBASIC3.1□□□□□ -1.91
C9orf72Q96LT7 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC3.1□□□□□ -1.91
C9orf72Q96LT7 AC018692.3-201ENST00000623929 123 ntBASIC3.1□□□□□ -1.91
C9orf72Q96LT7 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC3.1□□□□□ -1.91
C9orf72Q96LT7 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.1□□□□□ -1.91
C9orf72Q96LT7 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.1□□□□□ -1.91
C9orf72Q96LT7 AC108206.1-201ENST00000570186 4159 ntBASIC3.09□□□□□ -1.91
C9orf72Q96LT7 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
C9orf72Q96LT7 AC073325.2-201ENST00000339545 159 ntBASIC3.09□□□□□ -1.91
C9orf72Q96LT7 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
C9orf72Q96LT7 DEFB109C-201ENST00000382575 264 ntBASIC3.09□□□□□ -1.91
C9orf72Q96LT7 DEFB109B-201ENST00000382656 264 ntBASIC3.09□□□□□ -1.91
C9orf72Q96LT7 RNU6-441P-201ENST00000384545 106 ntBASIC3.09□□□□□ -1.91
C9orf72Q96LT7 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.09□□□□□ -1.91
C9orf72Q96LT7 BMS1P22-201ENST00000414726 313 ntBASIC3.09□□□□□ -1.91
C9orf72Q96LT7 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC3.09□□□□□ -1.91
C9orf72Q96LT7 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC3.09□□□□□ -1.91
C9orf72Q96LT7 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC3.09□□□□□ -1.91
C9orf72Q96LT7 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC3.09□□□□□ -1.91
C9orf72Q96LT7 RPS24P6-201ENST00000452670 400 ntBASIC3.09□□□□□ -1.91
C9orf72Q96LT7 AL358176.1-201ENST00000457477 357 ntTSL 5 BASIC3.09□□□□□ -1.91
C9orf72Q96LT7 RPL7P23-201ENST00000493874 747 ntBASIC3.09□□□□□ -1.91
C9orf72Q96LT7 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.09□□□□□ -1.91
C9orf72Q96LT7 MTCO3P44-201ENST00000510977 541 ntBASIC3.09□□□□□ -1.91
C9orf72Q96LT7 SNORA31.20-201ENST00000517111 133 ntBASIC3.09□□□□□ -1.91
C9orf72Q96LT7 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.09□□□□□ -1.91
C9orf72Q96LT7 AC007333.2-201ENST00000569998 559 ntTSL 4 BASIC3.09□□□□□ -1.91
C9orf72Q96LT7 AC012182.1-201ENST00000570133 895 ntBASIC3.09□□□□□ -1.91
C9orf72Q96LT7 VN1R88P-201ENST00000596787 292 ntBASIC3.09□□□□□ -1.91
C9orf72Q96LT7 AC012119.1-201ENST00000603184 222 ntBASIC3.09□□□□□ -1.91
C9orf72Q96LT7 AL133393.1-201ENST00000603277 287 ntBASIC3.09□□□□□ -1.91
C9orf72Q96LT7 OR4H6P-202ENST00000603819 340 ntBASIC3.09□□□□□ -1.91
C9orf72Q96LT7 AC013468.1-201ENST00000608680 598 ntBASIC3.09□□□□□ -1.91
C9orf72Q96LT7 AL390240.1-201ENST00000612950 384 ntBASIC3.09□□□□□ -1.91
C9orf72Q96LT7 AC007318.2-201ENST00000620999 243 ntBASIC3.09□□□□□ -1.91
C9orf72Q96LT7 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC3.09□□□□□ -1.91
C9orf72Q96LT7 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC3.09□□□□□ -1.91
C9orf72Q96LT7 AC006963.1-201ENST00000624003 1052 ntBASIC3.09□□□□□ -1.91
C9orf72Q96LT7 MTND5P7-201ENST00000413558 1798 ntBASIC3.09□□□□□ -1.91
C9orf72Q96LT7 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.09□□□□□ -1.91
C9orf72Q96LT7 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC3.09□□□□□ -1.92
C9orf72Q96LT7 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.09□□□□□ -1.92
C9orf72Q96LT7 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.92
C9orf72Q96LT7 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
C9orf72Q96LT7 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC3.08□□□□□ -1.92
C9orf72Q96LT7 MIR422A-201ENST00000362286 90 ntBASIC3.08□□□□□ -1.92
C9orf72Q96LT7 MIR181B1-201ENST00000385240 110 ntBASIC3.08□□□□□ -1.92
C9orf72Q96LT7 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
C9orf72Q96LT7 AL354719.1-201ENST00000406535 843 ntBASIC3.08□□□□□ -1.92
C9orf72Q96LT7 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.08□□□□□ -1.92
C9orf72Q96LT7 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
C9orf72Q96LT7 OR4K6P-201ENST00000416478 897 ntBASIC3.08□□□□□ -1.92
C9orf72Q96LT7 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC3.08□□□□□ -1.92
C9orf72Q96LT7 RPL7P44-201ENST00000424827 742 ntBASIC3.08□□□□□ -1.92
C9orf72Q96LT7 AC096632.1-201ENST00000427395 310 ntBASIC3.08□□□□□ -1.92
C9orf72Q96LT7 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC3.08□□□□□ -1.92
C9orf72Q96LT7 AC092170.1-201ENST00000440211 356 ntBASIC3.08□□□□□ -1.92
C9orf72Q96LT7 AC016696.1-201ENST00000446949 318 ntBASIC3.08□□□□□ -1.92
C9orf72Q96LT7 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC3.08□□□□□ -1.92
C9orf72Q96LT7 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.08□□□□□ -1.92
C9orf72Q96LT7 TPRKBP1-201ENST00000456243 481 ntBASIC3.08□□□□□ -1.92
C9orf72Q96LT7 S100A11P2-201ENST00000467589 312 ntBASIC3.08□□□□□ -1.92
C9orf72Q96LT7 RNA5SP385-201ENST00000515947 110 ntBASIC3.08□□□□□ -1.92
C9orf72Q96LT7 RNA5SP341-201ENST00000516261 117 ntBASIC3.08□□□□□ -1.92
C9orf72Q96LT7 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC3.08□□□□□ -1.92
C9orf72Q96LT7 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC3.08□□□□□ -1.92
C9orf72Q96LT7 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC3.08□□□□□ -1.92
C9orf72Q96LT7 AC095057.3-201ENST00000567102 1157 ntBASIC3.08□□□□□ -1.92
C9orf72Q96LT7 UBL5P2-201ENST00000583788 219 ntBASIC3.08□□□□□ -1.92
C9orf72Q96LT7 AC135507.2-201ENST00000612443 309 ntBASIC3.08□□□□□ -1.92
C9orf72Q96LT7 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
C9orf72Q96LT7 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC3.08□□□□□ -1.92
C9orf72Q96LT7 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC3.08□□□□□ -1.92
C9orf72Q96LT7 AC073055.1-201ENST00000456901 1621 ntBASIC3.08□□□□□ -1.92
C9orf72Q96LT7 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 105.2 ms