Protein–RNA interactions for Protein: Q96JI7

SPG11, Spatacsin, humanhuman

Predictions only

Length 2,443 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11Q96JI7 TRBV26-201ENST00000456572 344 ntBASIC2.02□□□□□ -2.09
SPG11Q96JI7 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC2.02□□□□□ -2.09
SPG11Q96JI7 AC067747.1-201ENST00000608026 250 ntBASIC2.02□□□□□ -2.09
SPG11Q96JI7 ATP13A5-205ENST00000620313 709 ntTSL 5 BASIC2.02□□□□□ -2.09
SPG11Q96JI7 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
SPG11Q96JI7 AP000526.1-201ENST00000603308 1388 ntBASIC2.02□□□□□ -2.09
SPG11Q96JI7 AC007342.7-201ENST00000624610 2337 ntBASIC2.02□□□□□ -2.09
SPG11Q96JI7 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
SPG11Q96JI7 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.02□□□□□ -2.09
SPG11Q96JI7 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
SPG11Q96JI7 TFPI-204ENST00000409676 1119 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
SPG11Q96JI7 LUZP4P1-201ENST00000415420 344 ntBASIC2.02□□□□□ -2.09
SPG11Q96JI7 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.02□□□□□ -2.09
SPG11Q96JI7 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC2.02□□□□□ -2.09
SPG11Q96JI7 RPS15AP17-201ENST00000470598 390 ntBASIC2.02□□□□□ -2.09
SPG11Q96JI7 RPL23AP49-201ENST00000492925 468 ntBASIC2.02□□□□□ -2.09
SPG11Q96JI7 KCTD9P5-201ENST00000504141 1170 ntBASIC2.02□□□□□ -2.09
SPG11Q96JI7 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC2.02□□□□□ -2.09
SPG11Q96JI7 MAL2-205ENST00000521048 575 ntTSL 4 BASIC2.02□□□□□ -2.09
SPG11Q96JI7 MIR4285-201ENST00000581001 85 ntBASIC2.02□□□□□ -2.09
SPG11Q96JI7 MIR4452-201ENST00000583004 71 ntBASIC2.02□□□□□ -2.09
SPG11Q96JI7 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC2.02□□□□□ -2.09
SPG11Q96JI7 AL008729.2-201ENST00000606393 473 ntBASIC2.02□□□□□ -2.09
SPG11Q96JI7 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC2.02□□□□□ -2.09
SPG11Q96JI7 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC2.02□□□□□ -2.09
SPG11Q96JI7 AC004925.1-201ENST00000624256 2706 ntBASIC2.01□□□□□ -2.09
SPG11Q96JI7 RNU1-87P-201ENST00000363727 170 ntBASIC2.01□□□□□ -2.09
SPG11Q96JI7 RNA5SP37-201ENST00000365420 130 ntBASIC2.01□□□□□ -2.09
SPG11Q96JI7 AC080125.1-201ENST00000414888 684 ntBASIC2.01□□□□□ -2.09
SPG11Q96JI7 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC2.01□□□□□ -2.09
SPG11Q96JI7 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC2.01□□□□□ -2.09
SPG11Q96JI7 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC2.01□□□□□ -2.09
SPG11Q96JI7 AK6P1-201ENST00000540219 478 ntBASIC2.01□□□□□ -2.09
SPG11Q96JI7 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.01□□□□□ -2.09
SPG11Q96JI7 RPL21P5-201ENST00000554662 472 ntBASIC2.01□□□□□ -2.09
SPG11Q96JI7 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC2.01□□□□□ -2.09
SPG11Q96JI7 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC2.01□□□□□ -2.09
SPG11Q96JI7 MIR5092-201ENST00000583139 88 ntBASIC2.01□□□□□ -2.09
SPG11Q96JI7 CR589904.2-201ENST00000612533 440 ntBASIC2.01□□□□□ -2.09
SPG11Q96JI7 AL353746.1-201ENST00000566293 6881 ntBASIC2.01□□□□□ -2.09
SPG11Q96JI7 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.01□□□□□ -2.09
SPG11Q96JI7 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
SPG11Q96JI7 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC2.01□□□□□ -2.09
SPG11Q96JI7 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
SPG11Q96JI7 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
SPG11Q96JI7 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
SPG11Q96JI7 RPL23AP48-201ENST00000406913 488 ntBASIC2.01□□□□□ -2.09
SPG11Q96JI7 RNU6-1140P-201ENST00000410517 106 ntBASIC2.01□□□□□ -2.09
SPG11Q96JI7 HMGB3P23-201ENST00000414981 585 ntBASIC2.01□□□□□ -2.09
SPG11Q96JI7 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC2.01□□□□□ -2.09
SPG11Q96JI7 AL390023.1-201ENST00000428836 262 ntBASIC2.01□□□□□ -2.09
SPG11Q96JI7 AC105402.2-201ENST00000438503 358 ntBASIC2.01□□□□□ -2.09
SPG11Q96JI7 AC080013.2-201ENST00000460866 323 ntBASIC2.01□□□□□ -2.09
SPG11Q96JI7 TRMT112P2-201ENST00000512910 132 ntBASIC2.01□□□□□ -2.09
SPG11Q96JI7 AC092851.1-201ENST00000535964 478 ntBASIC2.01□□□□□ -2.09
SPG11Q96JI7 AC135628.1-201ENST00000568867 534 ntBASIC2.01□□□□□ -2.09
SPG11Q96JI7 AC005046.1-201ENST00000608515 625 ntBASIC2.01□□□□□ -2.09
SPG11Q96JI7 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC2□□□□□ -2.09
SPG11Q96JI7 MTCO1P22-201ENST00000604619 1360 ntBASIC2□□□□□ -2.09
SPG11Q96JI7 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC2□□□□□ -2.09
SPG11Q96JI7 MDM4-202ENST00000367180 547 ntTSL 3 BASIC2□□□□□ -2.09
SPG11Q96JI7 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC2□□□□□ -2.09
SPG11Q96JI7 MIR137-201ENST00000385223 102 ntBASIC2□□□□□ -2.09
SPG11Q96JI7 AL023284.1-201ENST00000403956 276 ntBASIC2□□□□□ -2.09
SPG11Q96JI7 AL158825.1-201ENST00000414735 521 ntBASIC2□□□□□ -2.09
SPG11Q96JI7 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC2□□□□□ -2.09
SPG11Q96JI7 EXTL2P1-201ENST00000446218 416 ntBASIC2□□□□□ -2.09
SPG11Q96JI7 AL035551.1-201ENST00000446931 348 ntBASIC2□□□□□ -2.09
SPG11Q96JI7 HAR1A.1-201ENST00000459583 118 ntBASIC2□□□□□ -2.09
SPG11Q96JI7 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC2□□□□□ -2.09
SPG11Q96JI7 THAP6-203ENST00000502620 582 ntTSL 3 BASIC2□□□□□ -2.09
SPG11Q96JI7 AC025881.1-201ENST00000518851 512 ntBASIC2□□□□□ -2.09
SPG11Q96JI7 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC2□□□□□ -2.09
SPG11Q96JI7 MIR7973-1-201ENST00000614683 76 ntBASIC2□□□□□ -2.09
SPG11Q96JI7 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC2□□□□□ -2.09
SPG11Q96JI7 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC2□□□□□ -2.09
SPG11Q96JI7 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
SPG11Q96JI7 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC2□□□□□ -2.09
SPG11Q96JI7 GTF2IP23-201ENST00000423746 351 ntBASIC2□□□□□ -2.09
SPG11Q96JI7 AC125238.1-201ENST00000448842 249 ntBASIC2□□□□□ -2.09
SPG11Q96JI7 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC2□□□□□ -2.09
SPG11Q96JI7 RNA5SP380-201ENST00000517190 98 ntBASIC2□□□□□ -2.09
SPG11Q96JI7 MEG8-218ENST00000556720 456 ntTSL 3 BASIC2□□□□□ -2.09
SPG11Q96JI7 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2□□□□□ -2.09
SPG11Q96JI7 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
SPG11Q96JI7 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
SPG11Q96JI7 RNU1-91P-201ENST00000364746 163 ntBASIC1.99□□□□□ -2.09
SPG11Q96JI7 AL591416.1-201ENST00000404015 867 ntBASIC1.99□□□□□ -2.09
SPG11Q96JI7 BTF3P4-201ENST00000418852 495 ntBASIC1.99□□□□□ -2.09
SPG11Q96JI7 MTCO2P17-201ENST00000424336 677 ntBASIC1.99□□□□□ -2.09
SPG11Q96JI7 AL450263.2-201ENST00000439400 589 ntBASIC1.99□□□□□ -2.09
SPG11Q96JI7 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC1.99□□□□□ -2.09
SPG11Q96JI7 AL163540.1-201ENST00000485382 386 ntBASIC1.99□□□□□ -2.09
SPG11Q96JI7 RNA5SP476-201ENST00000516613 103 ntBASIC1.99□□□□□ -2.09
SPG11Q96JI7 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC1.99□□□□□ -2.09
SPG11Q96JI7 AL353684.1-201ENST00000622677 1120 ntBASIC1.99□□□□□ -2.09
SPG11Q96JI7 Y_RNA.251-201ENST00000364551 99 ntBASIC1.99□□□□□ -2.09
SPG11Q96JI7 AL512633.1-201ENST00000399931 655 ntBASIC1.99□□□□□ -2.09
SPG11Q96JI7 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC1.99□□□□□ -2.09
SPG11Q96JI7 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC1.99□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 78.9 ms