Protein–RNA interactions for Protein: Q96JB5

CDK5RAP3, CDK5 regulatory subunit-associated protein 3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3Q96JB5 U73479.1-201ENST00000618062 168 ntBASIC4.74□□□□□ -1.65
CDK5RAP3Q96JB5 AC011944.2-201ENST00000624440 683 ntBASIC4.74□□□□□ -1.65
CDK5RAP3Q96JB5 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC4.74□□□□□ -1.65
CDK5RAP3Q96JB5 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
CDK5RAP3Q96JB5 AL359893.1-201ENST00000447628 1580 ntBASIC4.74□□□□□ -1.65
CDK5RAP3Q96JB5 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC4.73□□□□□ -1.65
CDK5RAP3Q96JB5 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
CDK5RAP3Q96JB5 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
CDK5RAP3Q96JB5 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC4.73□□□□□ -1.65
CDK5RAP3Q96JB5 ANKRD20A10P-201ENST00000457591 1515 ntBASIC4.73□□□□□ -1.65
CDK5RAP3Q96JB5 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC4.73□□□□□ -1.65
CDK5RAP3Q96JB5 AC097714.1-201ENST00000511272 1647 ntBASIC4.73□□□□□ -1.65
CDK5RAP3Q96JB5 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
CDK5RAP3Q96JB5 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
CDK5RAP3Q96JB5 XIAPP3-201ENST00000312918 795 ntBASIC4.73□□□□□ -1.65
CDK5RAP3Q96JB5 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
CDK5RAP3Q96JB5 RNU6-28P-201ENST00000362378 107 ntBASIC4.73□□□□□ -1.65
CDK5RAP3Q96JB5 RNU1-132P-201ENST00000364300 164 ntBASIC4.73□□□□□ -1.65
CDK5RAP3Q96JB5 RNU6-769P-201ENST00000384407 104 ntBASIC4.73□□□□□ -1.65
CDK5RAP3Q96JB5 RNU6-809P-201ENST00000384461 107 ntBASIC4.73□□□□□ -1.65
CDK5RAP3Q96JB5 Y_RNA.517-201ENST00000384551 106 ntBASIC4.73□□□□□ -1.65
CDK5RAP3Q96JB5 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
CDK5RAP3Q96JB5 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC4.73□□□□□ -1.65
CDK5RAP3Q96JB5 RN7SKP56-201ENST00000410513 331 ntBASIC4.73□□□□□ -1.65
CDK5RAP3Q96JB5 RNU4-25P-201ENST00000410569 230 ntBASIC4.73□□□□□ -1.65
CDK5RAP3Q96JB5 MTCO1P17-201ENST00000411522 491 ntBASIC4.73□□□□□ -1.65
CDK5RAP3Q96JB5 RPL21P32-201ENST00000419877 477 ntBASIC4.73□□□□□ -1.65
CDK5RAP3Q96JB5 RPL18P10-201ENST00000425606 538 ntBASIC4.73□□□□□ -1.65
CDK5RAP3Q96JB5 AL445669.1-201ENST00000426743 755 ntBASIC4.73□□□□□ -1.65
CDK5RAP3Q96JB5 AL590233.1-201ENST00000430017 456 ntBASIC4.73□□□□□ -1.65
CDK5RAP3Q96JB5 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC4.73□□□□□ -1.65
CDK5RAP3Q96JB5 RSU1P2-202ENST00000437884 485 ntBASIC4.73□□□□□ -1.65
CDK5RAP3Q96JB5 AC069285.2-201ENST00000440210 275 ntBASIC4.73□□□□□ -1.65
CDK5RAP3Q96JB5 AC092641.1-201ENST00000440229 772 ntBASIC4.73□□□□□ -1.65
CDK5RAP3Q96JB5 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC4.73□□□□□ -1.65
CDK5RAP3Q96JB5 BTF3P5-201ENST00000457252 467 ntBASIC4.73□□□□□ -1.65
CDK5RAP3Q96JB5 OR9M1P-201ENST00000459641 921 ntBASIC4.73□□□□□ -1.65
CDK5RAP3Q96JB5 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
CDK5RAP3Q96JB5 AC104563.1-201ENST00000476147 376 ntBASIC4.73□□□□□ -1.65
CDK5RAP3Q96JB5 AF213884.1-201ENST00000488102 463 ntBASIC4.73□□□□□ -1.65
CDK5RAP3Q96JB5 RN7SL691P-201ENST00000494487 301 ntBASIC4.73□□□□□ -1.65
CDK5RAP3Q96JB5 BNIP3P41-201ENST00000503774 571 ntBASIC4.73□□□□□ -1.65
CDK5RAP3Q96JB5 AC020593.1-201ENST00000507399 299 ntBASIC4.73□□□□□ -1.65
CDK5RAP3Q96JB5 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC4.73□□□□□ -1.65
CDK5RAP3Q96JB5 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC4.73□□□□□ -1.65
CDK5RAP3Q96JB5 AC006499.6-201ENST00000511169 607 ntBASIC4.73□□□□□ -1.65
CDK5RAP3Q96JB5 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC4.73□□□□□ -1.65
CDK5RAP3Q96JB5 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
CDK5RAP3Q96JB5 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC4.73□□□□□ -1.65
CDK5RAP3Q96JB5 IGKV2D-36-201ENST00000518643 226 ntBASIC4.73□□□□□ -1.65
CDK5RAP3Q96JB5 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC4.73□□□□□ -1.65
CDK5RAP3Q96JB5 AC063950.1-201ENST00000552036 308 ntBASIC4.73□□□□□ -1.65
CDK5RAP3Q96JB5 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC4.73□□□□□ -1.65
CDK5RAP3Q96JB5 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC4.73□□□□□ -1.65
CDK5RAP3Q96JB5 AC053481.3-201ENST00000577881 843 ntBASIC4.73□□□□□ -1.65
CDK5RAP3Q96JB5 MIR5697-201ENST00000578045 78 ntBASIC4.73□□□□□ -1.65
CDK5RAP3Q96JB5 AC005771.1-201ENST00000585581 349 ntBASIC4.73□□□□□ -1.65
CDK5RAP3Q96JB5 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC4.73□□□□□ -1.65
CDK5RAP3Q96JB5 SEPT7P9-203ENST00000604116 343 ntBASIC4.73□□□□□ -1.65
CDK5RAP3Q96JB5 BCRP9-201ENST00000605312 388 ntBASIC4.73□□□□□ -1.65
CDK5RAP3Q96JB5 AC005332.10-201ENST00000612725 619 ntBASIC4.73□□□□□ -1.65
CDK5RAP3Q96JB5 AC114781.5-201ENST00000615297 108 ntBASIC4.73□□□□□ -1.65
CDK5RAP3Q96JB5 AC015540.1-201ENST00000615828 501 ntBASIC4.73□□□□□ -1.65
CDK5RAP3Q96JB5 AC026951.1-201ENST00000559530 2459 ntBASIC4.73□□□□□ -1.65
CDK5RAP3Q96JB5 TEX21P-201ENST00000447107 1476 ntBASIC4.73□□□□□ -1.65
CDK5RAP3Q96JB5 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC4.72□□□□□ -1.65
CDK5RAP3Q96JB5 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
CDK5RAP3Q96JB5 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
CDK5RAP3Q96JB5 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
CDK5RAP3Q96JB5 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
CDK5RAP3Q96JB5 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
CDK5RAP3Q96JB5 RNA5SP366-201ENST00000365454 123 ntBASIC4.72□□□□□ -1.65
CDK5RAP3Q96JB5 RNU6-744P-201ENST00000365557 107 ntBASIC4.72□□□□□ -1.65
CDK5RAP3Q96JB5 RNU6-730P-201ENST00000383954 104 ntBASIC4.72□□□□□ -1.65
CDK5RAP3Q96JB5 RNU6-1316P-201ENST00000384242 108 ntBASIC4.72□□□□□ -1.65
CDK5RAP3Q96JB5 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC4.72□□□□□ -1.65
CDK5RAP3Q96JB5 RPL23AP26-201ENST00000412728 464 ntBASIC4.72□□□□□ -1.65
CDK5RAP3Q96JB5 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC4.72□□□□□ -1.65
CDK5RAP3Q96JB5 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC4.72□□□□□ -1.65
CDK5RAP3Q96JB5 AL356583.2-201ENST00000426536 280 ntBASIC4.72□□□□□ -1.65
CDK5RAP3Q96JB5 AC109583.1-201ENST00000432156 268 ntBASIC4.72□□□□□ -1.65
CDK5RAP3Q96JB5 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC4.72□□□□□ -1.65
CDK5RAP3Q96JB5 AP000542.1-201ENST00000448473 371 ntBASIC4.72□□□□□ -1.65
CDK5RAP3Q96JB5 PDSS1P2-201ENST00000449397 678 ntBASIC4.72□□□□□ -1.65
CDK5RAP3Q96JB5 USP9YP12-201ENST00000450481 570 ntBASIC4.72□□□□□ -1.65
CDK5RAP3Q96JB5 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
CDK5RAP3Q96JB5 SUMO2P2-201ENST00000456482 255 ntBASIC4.72□□□□□ -1.65
CDK5RAP3Q96JB5 RPL23AP2-201ENST00000471227 466 ntBASIC4.72□□□□□ -1.65
CDK5RAP3Q96JB5 RN7SL481P-201ENST00000477764 299 ntBASIC4.72□□□□□ -1.65
CDK5RAP3Q96JB5 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC4.72□□□□□ -1.65
CDK5RAP3Q96JB5 AC108475.1-201ENST00000507880 950 ntBASIC4.72□□□□□ -1.65
CDK5RAP3Q96JB5 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC4.72□□□□□ -1.65
CDK5RAP3Q96JB5 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC4.72□□□□□ -1.65
CDK5RAP3Q96JB5 IFITM8P-201ENST00000522529 394 ntBASIC4.72□□□□□ -1.65
CDK5RAP3Q96JB5 AC105233.3-201ENST00000531125 744 ntBASIC4.72□□□□□ -1.65
CDK5RAP3Q96JB5 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC4.72□□□□□ -1.65
CDK5RAP3Q96JB5 MAL2-203ENST00000534619 578 ntTSL 4 BASIC4.72□□□□□ -1.65
CDK5RAP3Q96JB5 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC4.72□□□□□ -1.65
CDK5RAP3Q96JB5 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
CDK5RAP3Q96JB5 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC4.72□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms