Protein–RNA interactions for Protein: Q96CG8

CTHRC1, Collagen triple helix repeat-containing protein 1, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1Q96CG8 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC4.14□□□□□ -1.75
CTHRC1Q96CG8 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC4.14□□□□□ -1.75
CTHRC1Q96CG8 MTATP6P23-201ENST00000440153 476 ntBASIC4.14□□□□□ -1.75
CTHRC1Q96CG8 Z99127.3-201ENST00000448158 395 ntBASIC4.14□□□□□ -1.75
CTHRC1Q96CG8 IFNWP4-201ENST00000453148 294 ntBASIC4.14□□□□□ -1.75
CTHRC1Q96CG8 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC4.14□□□□□ -1.75
CTHRC1Q96CG8 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC4.14□□□□□ -1.75
CTHRC1Q96CG8 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
CTHRC1Q96CG8 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC4.14□□□□□ -1.75
CTHRC1Q96CG8 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
CTHRC1Q96CG8 RBM43P1-201ENST00000476891 1081 ntBASIC4.14□□□□□ -1.75
CTHRC1Q96CG8 RN7SL481P-201ENST00000477764 299 ntBASIC4.14□□□□□ -1.75
CTHRC1Q96CG8 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC4.14□□□□□ -1.75
CTHRC1Q96CG8 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC4.14□□□□□ -1.75
CTHRC1Q96CG8 SAP18P1-201ENST00000512058 390 ntBASIC4.14□□□□□ -1.75
CTHRC1Q96CG8 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC4.14□□□□□ -1.75
CTHRC1Q96CG8 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC4.14□□□□□ -1.75
CTHRC1Q96CG8 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
CTHRC1Q96CG8 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC4.14□□□□□ -1.75
CTHRC1Q96CG8 AC092325.1-201ENST00000566449 554 ntBASIC4.14□□□□□ -1.75
CTHRC1Q96CG8 AC009101.1-201ENST00000568135 242 ntBASIC4.14□□□□□ -1.75
CTHRC1Q96CG8 AC068135.2-201ENST00000569293 1028 ntBASIC4.14□□□□□ -1.75
CTHRC1Q96CG8 AC067852.4-201ENST00000590314 478 ntBASIC4.14□□□□□ -1.75
CTHRC1Q96CG8 RPL12P25-202ENST00000598100 674 ntBASIC4.14□□□□□ -1.75
CTHRC1Q96CG8 AC079587.1-201ENST00000603846 277 ntBASIC4.14□□□□□ -1.75
CTHRC1Q96CG8 AC091979.2-201ENST00000607514 214 ntBASIC4.14□□□□□ -1.75
CTHRC1Q96CG8 AC020634.1-201ENST00000608701 549 ntBASIC4.14□□□□□ -1.75
CTHRC1Q96CG8 AL590282.1-201ENST00000610379 1136 ntBASIC4.14□□□□□ -1.75
CTHRC1Q96CG8 BX664608.1-201ENST00000610519 487 ntBASIC4.14□□□□□ -1.75
CTHRC1Q96CG8 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC4.14□□□□□ -1.75
CTHRC1Q96CG8 AL158196.1-201ENST00000616786 434 ntBASIC4.14□□□□□ -1.75
CTHRC1Q96CG8 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC4.14□□□□□ -1.75
CTHRC1Q96CG8 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
CTHRC1Q96CG8 AC007546.2-201ENST00000623996 360 ntBASIC4.14□□□□□ -1.75
CTHRC1Q96CG8 AC079597.1-201ENST00000624306 508 ntBASIC4.14□□□□□ -1.75
CTHRC1Q96CG8 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
CTHRC1Q96CG8 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC4.14□□□□□ -1.75
CTHRC1Q96CG8 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC4.14□□□□□ -1.75
CTHRC1Q96CG8 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC4.14□□□□□ -1.75
CTHRC1Q96CG8 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
CTHRC1Q96CG8 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC4.14□□□□□ -1.75
CTHRC1Q96CG8 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
CTHRC1Q96CG8 MAPK10-320ENST00000641462 6696 ntBASIC4.14□□□□□ -1.75
CTHRC1Q96CG8 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC4.13□□□□□ -1.75
CTHRC1Q96CG8 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC4.13□□□□□ -1.75
CTHRC1Q96CG8 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
CTHRC1Q96CG8 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
CTHRC1Q96CG8 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC4.13□□□□□ -1.75
CTHRC1Q96CG8 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
CTHRC1Q96CG8 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
CTHRC1Q96CG8 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC4.13□□□□□ -1.75
CTHRC1Q96CG8 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
CTHRC1Q96CG8 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC4.13□□□□□ -1.75
CTHRC1Q96CG8 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC4.13□□□□□ -1.75
CTHRC1Q96CG8 RNU6-1283P-201ENST00000365314 105 ntBASIC4.13□□□□□ -1.75
CTHRC1Q96CG8 RNA5SP22-201ENST00000365393 109 ntBASIC4.13□□□□□ -1.75
CTHRC1Q96CG8 RNU6-359P-201ENST00000365466 108 ntBASIC4.13□□□□□ -1.75
CTHRC1Q96CG8 AC019155.1-201ENST00000382242 574 ntBASIC4.13□□□□□ -1.75
CTHRC1Q96CG8 MT-TC-201ENST00000387405 66 ntBASIC4.13□□□□□ -1.75
CTHRC1Q96CG8 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
CTHRC1Q96CG8 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
CTHRC1Q96CG8 RNA5SP372-201ENST00000390836 115 ntBASIC4.13□□□□□ -1.75
CTHRC1Q96CG8 U3.20-201ENST00000390909 217 ntBASIC4.13□□□□□ -1.75
CTHRC1Q96CG8 SNORD115-47-201ENST00000391226 86 ntBASIC4.13□□□□□ -1.75
CTHRC1Q96CG8 CIR1P3-201ENST00000405137 479 ntBASIC4.13□□□□□ -1.75
CTHRC1Q96CG8 RN7SKP235-201ENST00000410662 305 ntBASIC4.13□□□□□ -1.75
CTHRC1Q96CG8 RNU4-55P-201ENST00000410731 137 ntBASIC4.13□□□□□ -1.75
CTHRC1Q96CG8 AC078974.1-201ENST00000411597 223 ntBASIC4.13□□□□□ -1.75
CTHRC1Q96CG8 AC016397.1-201ENST00000412463 242 ntBASIC4.13□□□□□ -1.75
CTHRC1Q96CG8 AL356387.2-201ENST00000422272 243 ntBASIC4.13□□□□□ -1.75
CTHRC1Q96CG8 RPS12P5-201ENST00000423449 371 ntBASIC4.13□□□□□ -1.75
CTHRC1Q96CG8 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC4.13□□□□□ -1.75
CTHRC1Q96CG8 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC4.13□□□□□ -1.75
CTHRC1Q96CG8 AL451074.3-201ENST00000437709 472 ntBASIC4.13□□□□□ -1.75
CTHRC1Q96CG8 RBMX2P4-201ENST00000441256 376 ntBASIC4.13□□□□□ -1.75
CTHRC1Q96CG8 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC4.13□□□□□ -1.75
CTHRC1Q96CG8 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC4.13□□□□□ -1.75
CTHRC1Q96CG8 DHFRP3-201ENST00000455595 559 ntBASIC4.13□□□□□ -1.75
CTHRC1Q96CG8 AC007182.2-201ENST00000489251 402 ntBASIC4.13□□□□□ -1.75
CTHRC1Q96CG8 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC4.13□□□□□ -1.75
CTHRC1Q96CG8 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC4.13□□□□□ -1.75
CTHRC1Q96CG8 COX7A2P2-201ENST00000505291 250 ntBASIC4.13□□□□□ -1.75
CTHRC1Q96CG8 NPM1P41-201ENST00000512920 831 ntBASIC4.13□□□□□ -1.75
CTHRC1Q96CG8 AC005798.1-201ENST00000513715 387 ntBASIC4.13□□□□□ -1.75
CTHRC1Q96CG8 AC010342.1-201ENST00000514047 877 ntBASIC4.13□□□□□ -1.75
CTHRC1Q96CG8 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC4.13□□□□□ -1.75
CTHRC1Q96CG8 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC4.13□□□□□ -1.75
CTHRC1Q96CG8 AC134698.5-201ENST00000519444 336 ntBASIC4.13□□□□□ -1.75
CTHRC1Q96CG8 AP000907.2-201ENST00000530827 353 ntBASIC4.13□□□□□ -1.75
CTHRC1Q96CG8 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC4.13□□□□□ -1.75
CTHRC1Q96CG8 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC4.13□□□□□ -1.75
CTHRC1Q96CG8 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC4.13□□□□□ -1.75
CTHRC1Q96CG8 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC4.13□□□□□ -1.75
CTHRC1Q96CG8 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC4.13□□□□□ -1.75
CTHRC1Q96CG8 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC4.13□□□□□ -1.75
CTHRC1Q96CG8 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC4.13□□□□□ -1.75
CTHRC1Q96CG8 ELOCP28-201ENST00000590044 317 ntBASIC4.13□□□□□ -1.75
CTHRC1Q96CG8 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC4.13□□□□□ -1.75
CTHRC1Q96CG8 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
CTHRC1Q96CG8 AC007014.2-201ENST00000615581 479 ntBASIC4.13□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 113.9 ms