Protein–RNA interactions for Protein: Q8WXH6

RAB40A, Ras-related protein Rab-40A, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40AQ8WXH6 MIR3611-201ENST00000584484 83 ntBASIC3.87□□□□□ -1.79
RAB40AQ8WXH6 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC3.87□□□□□ -1.79
RAB40AQ8WXH6 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC3.87□□□□□ -1.79
RAB40AQ8WXH6 XIAPP1-201ENST00000603162 600 ntBASIC3.87□□□□□ -1.79
RAB40AQ8WXH6 AC006254.3-201ENST00000603353 884 ntBASIC3.87□□□□□ -1.79
RAB40AQ8WXH6 TUG1_1.1-201ENST00000610654 145 ntBASIC3.87□□□□□ -1.79
RAB40AQ8WXH6 DLEU2_1.1-201ENST00000612089 120 ntBASIC3.87□□□□□ -1.79
RAB40AQ8WXH6 DLEU2_1.2-201ENST00000614667 120 ntBASIC3.87□□□□□ -1.79
RAB40AQ8WXH6 AC104010.1-201ENST00000616889 150 ntBASIC3.87□□□□□ -1.79
RAB40AQ8WXH6 AL049536.1-201ENST00000625043 744 ntBASIC3.87□□□□□ -1.79
RAB40AQ8WXH6 LINC00622-201ENST00000562811 1570 ntBASIC3.87□□□□□ -1.79
RAB40AQ8WXH6 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC3.87□□□□□ -1.79
RAB40AQ8WXH6 ZNF137P-201ENST00000456718 1920 ntBASIC3.87□□□□□ -1.79
RAB40AQ8WXH6 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
RAB40AQ8WXH6 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
RAB40AQ8WXH6 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC3.86□□□□□ -1.79
RAB40AQ8WXH6 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
RAB40AQ8WXH6 AC011460.1-201ENST00000636268 1834 ntBASIC3.86□□□□□ -1.79
RAB40AQ8WXH6 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC3.86□□□□□ -1.79
RAB40AQ8WXH6 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
RAB40AQ8WXH6 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
RAB40AQ8WXH6 AC108467.2-201ENST00000617640 1597 ntBASIC3.86□□□□□ -1.79
RAB40AQ8WXH6 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
RAB40AQ8WXH6 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
RAB40AQ8WXH6 FRG1BP-201ENST00000278882 761 ntBASIC3.86□□□□□ -1.79
RAB40AQ8WXH6 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
RAB40AQ8WXH6 RNU6-623P-201ENST00000363143 105 ntBASIC3.86□□□□□ -1.79
RAB40AQ8WXH6 RNU1-32P-201ENST00000363937 159 ntBASIC3.86□□□□□ -1.79
RAB40AQ8WXH6 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
RAB40AQ8WXH6 RNA5SP332-201ENST00000391063 115 ntBASIC3.86□□□□□ -1.79
RAB40AQ8WXH6 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
RAB40AQ8WXH6 HMGN1P14-201ENST00000412459 517 ntBASIC3.86□□□□□ -1.79
RAB40AQ8WXH6 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC3.86□□□□□ -1.79
RAB40AQ8WXH6 AC009480.2-201ENST00000422916 432 ntBASIC3.86□□□□□ -1.79
RAB40AQ8WXH6 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC3.86□□□□□ -1.79
RAB40AQ8WXH6 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC3.86□□□□□ -1.79
RAB40AQ8WXH6 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC3.86□□□□□ -1.79
RAB40AQ8WXH6 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC3.86□□□□□ -1.79
RAB40AQ8WXH6 USP9YP29-201ENST00000445112 563 ntBASIC3.86□□□□□ -1.79
RAB40AQ8WXH6 AL592447.1-201ENST00000447592 540 ntBASIC3.86□□□□□ -1.79
RAB40AQ8WXH6 ABCF2P2-201ENST00000450549 296 ntBASIC3.86□□□□□ -1.79
RAB40AQ8WXH6 AL121877.1-201ENST00000453704 622 ntBASIC3.86□□□□□ -1.79
RAB40AQ8WXH6 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC3.86□□□□□ -1.79
RAB40AQ8WXH6 SCARNA10-201ENST00000459255 330 ntBASIC3.86□□□□□ -1.79
RAB40AQ8WXH6 AC104763.1-201ENST00000475274 360 ntBASIC3.86□□□□□ -1.79
RAB40AQ8WXH6 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC3.86□□□□□ -1.79
RAB40AQ8WXH6 RPL36AP41-201ENST00000493820 306 ntBASIC3.86□□□□□ -1.79
RAB40AQ8WXH6 CBX3P3-201ENST00000508108 532 ntBASIC3.86□□□□□ -1.79
RAB40AQ8WXH6 MTCO3P7-201ENST00000510008 774 ntBASIC3.86□□□□□ -1.79
RAB40AQ8WXH6 MTND3P5-201ENST00000512798 333 ntBASIC3.86□□□□□ -1.79
RAB40AQ8WXH6 AC022447.1-201ENST00000515358 464 ntBASIC3.86□□□□□ -1.79
RAB40AQ8WXH6 RNU6-528P-201ENST00000516926 100 ntBASIC3.86□□□□□ -1.79
RAB40AQ8WXH6 PAICSP4-201ENST00000517543 1253 ntBASIC3.86□□□□□ -1.79
RAB40AQ8WXH6 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC3.86□□□□□ -1.79
RAB40AQ8WXH6 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC3.86□□□□□ -1.79
RAB40AQ8WXH6 ZNF519P3-201ENST00000557158 1032 ntBASIC3.86□□□□□ -1.79
RAB40AQ8WXH6 AC009101.1-201ENST00000568135 242 ntBASIC3.86□□□□□ -1.79
RAB40AQ8WXH6 AC060771.1-201ENST00000582031 164 ntBASIC3.86□□□□□ -1.79
RAB40AQ8WXH6 SNORD84-203ENST00000584275 78 ntBASIC3.86□□□□□ -1.79
RAB40AQ8WXH6 BNIP3P8-201ENST00000597863 560 ntBASIC3.86□□□□□ -1.79
RAB40AQ8WXH6 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC3.86□□□□□ -1.79
RAB40AQ8WXH6 AC112191.3-201ENST00000604371 277 ntBASIC3.86□□□□□ -1.79
RAB40AQ8WXH6 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC3.86□□□□□ -1.79
RAB40AQ8WXH6 AL359999.1-201ENST00000604513 294 ntBASIC3.86□□□□□ -1.79
RAB40AQ8WXH6 Z98200.1-201ENST00000607298 470 ntBASIC3.86□□□□□ -1.79
RAB40AQ8WXH6 OR10AB1P-201ENST00000609613 938 ntBASIC3.86□□□□□ -1.79
RAB40AQ8WXH6 HULC.1-201ENST00000612720 240 ntBASIC3.86□□□□□ -1.79
RAB40AQ8WXH6 AC010678.1-201ENST00000614118 713 ntBASIC3.86□□□□□ -1.79
RAB40AQ8WXH6 AC233309.1-201ENST00000619522 751 ntBASIC3.86□□□□□ -1.79
RAB40AQ8WXH6 AC019278.1-201ENST00000623516 479 ntBASIC3.86□□□□□ -1.79
RAB40AQ8WXH6 AC092656.1-203ENST00000624134 423 ntBASIC3.86□□□□□ -1.79
RAB40AQ8WXH6 U3.53-201ENST00000628922 216 ntBASIC3.86□□□□□ -1.79
RAB40AQ8WXH6 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
RAB40AQ8WXH6 AC107953.2-201ENST00000518362 1408 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
RAB40AQ8WXH6 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC3.85□□□□□ -1.79
RAB40AQ8WXH6 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC3.85□□□□□ -1.79
RAB40AQ8WXH6 ANKRD20A10P-201ENST00000457591 1515 ntBASIC3.85□□□□□ -1.79
RAB40AQ8WXH6 MTCO1P9-201ENST00000505577 1534 ntBASIC3.85□□□□□ -1.79
RAB40AQ8WXH6 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
RAB40AQ8WXH6 STK31-205ENST00000433467 3085 ntTSL 2 BASIC3.85□□□□□ -1.79
RAB40AQ8WXH6 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
RAB40AQ8WXH6 AL365440.1-201ENST00000436135 2167 ntBASIC3.85□□□□□ -1.79
RAB40AQ8WXH6 AC009902.3-201ENST00000606235 2172 ntBASIC3.85□□□□□ -1.79
RAB40AQ8WXH6 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC3.85□□□□□ -1.79
RAB40AQ8WXH6 Y_RNA.46-201ENST00000362695 102 ntBASIC3.85□□□□□ -1.79
RAB40AQ8WXH6 Y_RNA.194-201ENST00000363985 102 ntBASIC3.85□□□□□ -1.79
RAB40AQ8WXH6 RNA5SP235-201ENST00000365411 114 ntBASIC3.85□□□□□ -1.79
RAB40AQ8WXH6 RNU6-629P-201ENST00000384061 103 ntBASIC3.85□□□□□ -1.79
RAB40AQ8WXH6 RNU6-114P-201ENST00000384704 105 ntBASIC3.85□□□□□ -1.79
RAB40AQ8WXH6 RPS20P2-201ENST00000402520 389 ntBASIC3.85□□□□□ -1.79
RAB40AQ8WXH6 RNA5SP239-201ENST00000410218 129 ntBASIC3.85□□□□□ -1.79
RAB40AQ8WXH6 RNA5SP39-201ENST00000411245 120 ntBASIC3.85□□□□□ -1.79
RAB40AQ8WXH6 RAD23BP2-201ENST00000416003 1207 ntBASIC3.85□□□□□ -1.79
RAB40AQ8WXH6 EI24P1-201ENST00000416584 867 ntBASIC3.85□□□□□ -1.79
RAB40AQ8WXH6 AC099677.1-201ENST00000420575 175 ntBASIC3.85□□□□□ -1.79
RAB40AQ8WXH6 AC006366.1-201ENST00000422002 759 ntBASIC3.85□□□□□ -1.79
RAB40AQ8WXH6 RBMY1KP-201ENST00000423480 476 ntBASIC3.85□□□□□ -1.79
RAB40AQ8WXH6 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC3.85□□□□□ -1.79
RAB40AQ8WXH6 AC114495.1-201ENST00000441274 436 ntBASIC3.85□□□□□ -1.79
RAB40AQ8WXH6 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC3.85□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 116.1 ms