Protein–RNA interactions for Protein: Q8WXH0

SYNE2, Nesprin-2, humanhuman

Known RBP Predictions only

Length 6,885 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2Q8WXH0 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC1.05□□□□□ -2.24
SYNE2Q8WXH0 AC002487.1-201ENST00000604565 994 ntBASIC1.05□□□□□ -2.24
SYNE2Q8WXH0 NAA50-211ENST00000630058 177 ntTSL 5 BASIC1.05□□□□□ -2.24
SYNE2Q8WXH0 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC1.05□□□□□ -2.24
SYNE2Q8WXH0 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC1.05□□□□□ -2.24
SYNE2Q8WXH0 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC1.05□□□□□ -2.24
SYNE2Q8WXH0 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC1.05□□□□□ -2.24
SYNE2Q8WXH0 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC1.05□□□□□ -2.24
SYNE2Q8WXH0 MIR26A1-201ENST00000362205 77 ntBASIC1.05□□□□□ -2.24
SYNE2Q8WXH0 CASP3-203ENST00000393588 677 ntTSL 4 BASIC1.05□□□□□ -2.24
SYNE2Q8WXH0 AL365396.1-201ENST00000430854 671 ntBASIC1.05□□□□□ -2.24
SYNE2Q8WXH0 OR5H3P-201ENST00000502817 919 ntBASIC1.05□□□□□ -2.24
SYNE2Q8WXH0 OR5D17P-201ENST00000531492 978 ntBASIC1.05□□□□□ -2.24
SYNE2Q8WXH0 DDX43P2-201ENST00000604753 1354 ntBASIC1.05□□□□□ -2.24
SYNE2Q8WXH0 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC1.05□□□□□ -2.24
SYNE2Q8WXH0 MFSD8-233ENST00000641482 4860 ntBASIC1.05□□□□□ -2.24
SYNE2Q8WXH0 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC1.05□□□□□ -2.24
SYNE2Q8WXH0 RNU6-1305P-201ENST00000364353 104 ntBASIC1.05□□□□□ -2.24
SYNE2Q8WXH0 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC1.05□□□□□ -2.24
SYNE2Q8WXH0 AC016687.1-201ENST00000482574 353 ntBASIC1.05□□□□□ -2.24
SYNE2Q8WXH0 AC087441.2-201ENST00000529141 262 ntBASIC1.05□□□□□ -2.24
SYNE2Q8WXH0 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC1.05□□□□□ -2.24
SYNE2Q8WXH0 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC1.05□□□□□ -2.24
SYNE2Q8WXH0 MIR1273G-201ENST00000577677 100 ntBASIC1.05□□□□□ -2.24
SYNE2Q8WXH0 AC016727.2-201ENST00000603988 621 ntBASIC1.05□□□□□ -2.24
SYNE2Q8WXH0 AC104307.1-201ENST00000616142 196 ntBASIC1.05□□□□□ -2.24
SYNE2Q8WXH0 AC010872.1-201ENST00000624225 675 ntBASIC1.05□□□□□ -2.24
SYNE2Q8WXH0 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC1.05□□□□□ -2.24
SYNE2Q8WXH0 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC1.05□□□□□ -2.24
SYNE2Q8WXH0 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC1.05□□□□□ -2.24
SYNE2Q8WXH0 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC1.05□□□□□ -2.24
SYNE2Q8WXH0 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.05□□□□□ -2.24
SYNE2Q8WXH0 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC1.05□□□□□ -2.24
SYNE2Q8WXH0 EEF1B2P4-201ENST00000551398 348 ntBASIC1.05□□□□□ -2.24
SYNE2Q8WXH0 AC093524.1-201ENST00000564266 1094 ntBASIC1.05□□□□□ -2.24
SYNE2Q8WXH0 AC098798.1-201ENST00000503998 1447 ntTSL 5 BASIC1.05□□□□□ -2.24
SYNE2Q8WXH0 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC1.05□□□□□ -2.24
SYNE2Q8WXH0 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC1.05□□□□□ -2.24
SYNE2Q8WXH0 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC1.05□□□□□ -2.24
SYNE2Q8WXH0 RPS27AP10-201ENST00000496103 208 ntBASIC1.05□□□□□ -2.24
SYNE2Q8WXH0 RNA5SP281-201ENST00000516504 135 ntBASIC1.05□□□□□ -2.24
SYNE2Q8WXH0 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC1.05□□□□□ -2.24
SYNE2Q8WXH0 AC127024.5-201ENST00000580085 462 ntBASIC1.05□□□□□ -2.24
SYNE2Q8WXH0 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC1.04□□□□□ -2.24
SYNE2Q8WXH0 AC100821.1-201ENST00000523153 2479 ntBASIC1.04□□□□□ -2.24
SYNE2Q8WXH0 MEIOB-205ENST00000470044 1857 ntTSL 2 BASIC1.04□□□□□ -2.24
SYNE2Q8WXH0 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC1.04□□□□□ -2.24
SYNE2Q8WXH0 VDAC2P1-201ENST00000399358 958 ntBASIC1.04□□□□□ -2.24
SYNE2Q8WXH0 RNA5SP380-201ENST00000517190 98 ntBASIC1.04□□□□□ -2.24
SYNE2Q8WXH0 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC1.04□□□□□ -2.24
SYNE2Q8WXH0 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC1.04□□□□□ -2.24
SYNE2Q8WXH0 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC1.04□□□□□ -2.24
SYNE2Q8WXH0 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC1.04□□□□□ -2.24
SYNE2Q8WXH0 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC1.04□□□□□ -2.24
SYNE2Q8WXH0 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC1.04□□□□□ -2.24
SYNE2Q8WXH0 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC1.04□□□□□ -2.24
SYNE2Q8WXH0 CLECL1-201ENST00000327839 670 ntAPPRIS P3 TSL 1 (best) BASIC1.04□□□□□ -2.24
SYNE2Q8WXH0 AC090525.1-201ENST00000479116 478 ntBASIC1.04□□□□□ -2.24
SYNE2Q8WXH0 AC025554.1-201ENST00000505641 188 ntBASIC1.04□□□□□ -2.24
SYNE2Q8WXH0 SPINK9-202ENST00000511717 604 ntAPPRIS ALT2 TSL 5 BASIC1.04□□□□□ -2.24
SYNE2Q8WXH0 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC1.04□□□□□ -2.24
SYNE2Q8WXH0 SNORA35B-201ENST00000607417 129 ntBASIC1.04□□□□□ -2.24
SYNE2Q8WXH0 AC016590.3-201ENST00000611171 753 ntBASIC1.04□□□□□ -2.24
SYNE2Q8WXH0 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.04□□□□□ -2.24
SYNE2Q8WXH0 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC1.04□□□□□ -2.24
SYNE2Q8WXH0 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC1.04□□□□□ -2.24
SYNE2Q8WXH0 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC1.04□□□□□ -2.24
SYNE2Q8WXH0 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC1.04□□□□□ -2.24
SYNE2Q8WXH0 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC1.04□□□□□ -2.24
SYNE2Q8WXH0 AL391987.6-201ENST00000305671 199 ntBASIC1.04□□□□□ -2.24
SYNE2Q8WXH0 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.04□□□□□ -2.24
SYNE2Q8WXH0 TATDN1P1-201ENST00000414123 891 ntBASIC1.04□□□□□ -2.24
SYNE2Q8WXH0 AC009237.2-201ENST00000421358 284 ntBASIC1.04□□□□□ -2.24
SYNE2Q8WXH0 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC1.04□□□□□ -2.24
SYNE2Q8WXH0 RPF2P2-201ENST00000504693 896 ntBASIC1.04□□□□□ -2.24
SYNE2Q8WXH0 RNA5SP330-201ENST00000517096 96 ntBASIC1.04□□□□□ -2.24
SYNE2Q8WXH0 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC1.04□□□□□ -2.24
SYNE2Q8WXH0 RGS4-209ENST00000531057 544 ntTSL 4 BASIC1.04□□□□□ -2.24
SYNE2Q8WXH0 DNAJC19P9-201ENST00000555084 351 ntBASIC1.04□□□□□ -2.24
SYNE2Q8WXH0 SCN1A-220ENST00000641603 12506 ntBASIC1.04□□□□□ -2.24
SYNE2Q8WXH0 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC1.04□□□□□ -2.24
SYNE2Q8WXH0 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC1.04□□□□□ -2.24
SYNE2Q8WXH0 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC1.04□□□□□ -2.24
SYNE2Q8WXH0 U8.10-201ENST00000384260 133 ntBASIC1.04□□□□□ -2.24
SYNE2Q8WXH0 Y_RNA.572-201ENST00000384757 98 ntBASIC1.04□□□□□ -2.24
SYNE2Q8WXH0 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC1.04□□□□□ -2.24
SYNE2Q8WXH0 AC007560.1-201ENST00000426912 237 ntBASIC1.04□□□□□ -2.24
SYNE2Q8WXH0 PRELID3BP10-201ENST00000431957 584 ntBASIC1.04□□□□□ -2.24
SYNE2Q8WXH0 AC003989.2-201ENST00000440224 169 ntBASIC1.04□□□□□ -2.24
SYNE2Q8WXH0 MTCO1P53-201ENST00000441633 699 ntBASIC1.04□□□□□ -2.24
SYNE2Q8WXH0 AC112653.1-201ENST00000443851 386 ntBASIC1.04□□□□□ -2.24
SYNE2Q8WXH0 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC1.04□□□□□ -2.24
SYNE2Q8WXH0 AL121821.2-201ENST00000556081 394 ntBASIC1.04□□□□□ -2.24
SYNE2Q8WXH0 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC1.04□□□□□ -2.24
SYNE2Q8WXH0 uc_338.5-201ENST00000611839 155 ntBASIC1.04□□□□□ -2.24
SYNE2Q8WXH0 MIR338-201ENST00000636369 67 ntBASIC1.04□□□□□ -2.24
SYNE2Q8WXH0 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC1.04□□□□□ -2.24
SYNE2Q8WXH0 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC1.04□□□□□ -2.24
SYNE2Q8WXH0 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC1.04□□□□□ -2.24
SYNE2Q8WXH0 Y_RNA.142-201ENST00000363491 102 ntBASIC1.04□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 84.7 ms