Protein–RNA interactions for Protein: Q8TE12

LMX1A, LIM homeobox transcription factor 1-alpha, humanhuman

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1AQ8TE12 RN7SL75P-201ENST00000461926 281 ntBASIC2.65□□□□□ -1.99
LMX1AQ8TE12 AC104689.1-201ENST00000473356 768 ntBASIC2.65□□□□□ -1.99
LMX1AQ8TE12 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC2.65□□□□□ -1.99
LMX1AQ8TE12 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC2.65□□□□□ -1.99
LMX1AQ8TE12 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC2.65□□□□□ -1.99
LMX1AQ8TE12 RNU6-751P-201ENST00000516382 101 ntBASIC2.65□□□□□ -1.99
LMX1AQ8TE12 RN7SKP277-201ENST00000516895 283 ntBASIC2.65□□□□□ -1.99
LMX1AQ8TE12 AC008562.1-201ENST00000521763 330 ntBASIC2.65□□□□□ -1.99
LMX1AQ8TE12 RGS4-209ENST00000531057 544 ntTSL 4 BASIC2.65□□□□□ -1.99
LMX1AQ8TE12 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC2.65□□□□□ -1.99
LMX1AQ8TE12 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC2.65□□□□□ -1.99
LMX1AQ8TE12 AC234778.2-201ENST00000566241 354 ntBASIC2.65□□□□□ -1.99
LMX1AQ8TE12 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC2.65□□□□□ -1.99
LMX1AQ8TE12 MIR3690-201ENST00000580266 75 ntBASIC2.65□□□□□ -1.99
LMX1AQ8TE12 AC013412.1-201ENST00000610687 192 ntBASIC2.65□□□□□ -1.99
LMX1AQ8TE12 AC010338.1-201ENST00000621823 717 ntBASIC2.65□□□□□ -1.99
LMX1AQ8TE12 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC2.65□□□□□ -1.99
LMX1AQ8TE12 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC2.65□□□□□ -1.99
LMX1AQ8TE12 MEG8-222ENST00000637332 1237 ntTSL 5 BASIC2.65□□□□□ -1.99
LMX1AQ8TE12 AC010149.2-201ENST00000637608 315 ntBASIC2.65□□□□□ -1.99
LMX1AQ8TE12 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC2.65□□□□□ -1.99
LMX1AQ8TE12 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
LMX1AQ8TE12 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
LMX1AQ8TE12 RNA5SP68-201ENST00000363885 119 ntBASIC2.64□□□□□ -1.99
LMX1AQ8TE12 IL6ST-204ENST00000381293 612 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
LMX1AQ8TE12 RNU6-40P-201ENST00000384254 107 ntBASIC2.64□□□□□ -1.99
LMX1AQ8TE12 MIR181A2-201ENST00000384863 110 ntBASIC2.64□□□□□ -1.99
LMX1AQ8TE12 MTND4LP20-201ENST00000402379 270 ntBASIC2.64□□□□□ -1.99
LMX1AQ8TE12 RPL23AP47-201ENST00000408017 460 ntBASIC2.64□□□□□ -1.99
LMX1AQ8TE12 RNA5SP508-201ENST00000411327 119 ntBASIC2.64□□□□□ -1.99
LMX1AQ8TE12 MTCO3P4-201ENST00000419236 787 ntBASIC2.64□□□□□ -1.99
LMX1AQ8TE12 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC2.64□□□□□ -1.99
LMX1AQ8TE12 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC2.64□□□□□ -1.99
LMX1AQ8TE12 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC2.64□□□□□ -1.99
LMX1AQ8TE12 HMGN2P20-201ENST00000437531 273 ntBASIC2.64□□□□□ -1.99
LMX1AQ8TE12 XKRY2-201ENST00000442362 1093 ntBASIC2.64□□□□□ -1.99
LMX1AQ8TE12 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.64□□□□□ -1.99
LMX1AQ8TE12 AL592437.1-201ENST00000443781 492 ntBASIC2.64□□□□□ -1.99
LMX1AQ8TE12 AL590399.6-201ENST00000446396 307 ntBASIC2.64□□□□□ -1.99
LMX1AQ8TE12 HGF-207ENST00000453018 721 ntTSL 3 BASIC2.64□□□□□ -1.99
LMX1AQ8TE12 MRPL35P4-201ENST00000453682 566 ntBASIC2.64□□□□□ -1.99
LMX1AQ8TE12 AC003982.1-202ENST00000469928 248 ntBASIC2.64□□□□□ -1.99
LMX1AQ8TE12 VN1R17P-201ENST00000472048 1090 ntBASIC2.64□□□□□ -1.99
LMX1AQ8TE12 NCOR1P1-202ENST00000486162 291 ntBASIC2.64□□□□□ -1.99
LMX1AQ8TE12 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC2.64□□□□□ -1.99
LMX1AQ8TE12 HMGB3P15-201ENST00000507326 574 ntBASIC2.64□□□□□ -1.99
LMX1AQ8TE12 AC010265.1-201ENST00000513509 211 ntBASIC2.64□□□□□ -1.99
LMX1AQ8TE12 MTND2P26-201ENST00000528255 1029 ntBASIC2.64□□□□□ -1.99
LMX1AQ8TE12 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC2.64□□□□□ -1.99
LMX1AQ8TE12 AC010198.2-201ENST00000550612 259 ntBASIC2.64□□□□□ -1.99
LMX1AQ8TE12 SYF2P1-201ENST00000550658 413 ntBASIC2.64□□□□□ -1.99
LMX1AQ8TE12 AL163153.1-201ENST00000554223 283 ntBASIC2.64□□□□□ -1.99
LMX1AQ8TE12 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC2.64□□□□□ -1.99
LMX1AQ8TE12 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC2.64□□□□□ -1.99
LMX1AQ8TE12 AC127540.1-201ENST00000580311 689 ntTSL 5 BASIC2.64□□□□□ -1.99
LMX1AQ8TE12 MIR4506-201ENST00000584693 77 ntBASIC2.64□□□□□ -1.99
LMX1AQ8TE12 CR589904.2-201ENST00000612533 440 ntBASIC2.64□□□□□ -1.99
LMX1AQ8TE12 MIR6817-201ENST00000615588 66 ntBASIC2.64□□□□□ -1.99
LMX1AQ8TE12 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC2.64□□□□□ -1.99
LMX1AQ8TE12 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC2.64□□□□□ -1.99
LMX1AQ8TE12 AL136164.4-201ENST00000625013 2135 ntBASIC2.64□□□□□ -1.99
LMX1AQ8TE12 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC2.64□□□□□ -1.99
LMX1AQ8TE12 MAPK10-362ENST00000641864 4484 ntBASIC2.64□□□□□ -1.99
LMX1AQ8TE12 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
LMX1AQ8TE12 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC2.64□□□□□ -1.99
LMX1AQ8TE12 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
LMX1AQ8TE12 AP003122.5-201ENST00000527668 3766 ntBASIC2.63□□□□□ -1.99
LMX1AQ8TE12 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
LMX1AQ8TE12 MTND4P34-201ENST00000572715 1371 ntBASIC2.63□□□□□ -1.99
LMX1AQ8TE12 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
LMX1AQ8TE12 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
LMX1AQ8TE12 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
LMX1AQ8TE12 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
LMX1AQ8TE12 RPL21P3-201ENST00000395517 478 ntBASIC2.63□□□□□ -1.99
LMX1AQ8TE12 AL356057.1-202ENST00000402263 756 ntBASIC2.63□□□□□ -1.99
LMX1AQ8TE12 AL355379.1-201ENST00000405542 640 ntBASIC2.63□□□□□ -1.99
LMX1AQ8TE12 NDUFB4P5-201ENST00000415445 361 ntBASIC2.63□□□□□ -1.99
LMX1AQ8TE12 AC244098.2-201ENST00000422068 99 ntBASIC2.63□□□□□ -1.99
LMX1AQ8TE12 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC2.63□□□□□ -1.99
LMX1AQ8TE12 AL590623.1-201ENST00000427864 105 ntBASIC2.63□□□□□ -1.99
LMX1AQ8TE12 AL035407.1-201ENST00000429211 571 ntBASIC2.63□□□□□ -1.99
LMX1AQ8TE12 AC009969.1-201ENST00000438726 172 ntBASIC2.63□□□□□ -1.99
LMX1AQ8TE12 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC2.63□□□□□ -1.99
LMX1AQ8TE12 BX276092.4-201ENST00000452056 248 ntBASIC2.63□□□□□ -1.99
LMX1AQ8TE12 AC146507.2-201ENST00000460608 476 ntBASIC2.63□□□□□ -1.99
LMX1AQ8TE12 AC090543.1-201ENST00000492168 485 ntBASIC2.63□□□□□ -1.99
LMX1AQ8TE12 AC111193.1-201ENST00000504097 155 ntBASIC2.63□□□□□ -1.99
LMX1AQ8TE12 RNA5SP385-201ENST00000515947 110 ntBASIC2.63□□□□□ -1.99
LMX1AQ8TE12 COX6B1P6-201ENST00000522347 255 ntBASIC2.63□□□□□ -1.99
LMX1AQ8TE12 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC2.63□□□□□ -1.99
LMX1AQ8TE12 POLR2KP1-201ENST00000553226 168 ntBASIC2.63□□□□□ -1.99
LMX1AQ8TE12 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC2.63□□□□□ -1.99
LMX1AQ8TE12 CASC16-202ENST00000563844 610 ntTSL 3 BASIC2.63□□□□□ -1.99
LMX1AQ8TE12 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC2.63□□□□□ -1.99
LMX1AQ8TE12 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
LMX1AQ8TE12 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
LMX1AQ8TE12 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC2.63□□□□□ -1.99
LMX1AQ8TE12 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
LMX1AQ8TE12 AC104446.1-201ENST00000613728 1321 ntBASIC2.63□□□□□ -1.99
LMX1AQ8TE12 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC2.63□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 89.6 ms