Protein–RNA interactions for Protein: Q8NI28

LINC01006, Putative uncharacterized protein encoded by LINC01006, humanhuman

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01006Q8NI28 AC011611.1-201ENST00000552179 197 ntBASIC2.85□□□□□ -1.95
LINC01006Q8NI28 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC2.85□□□□□ -1.95
LINC01006Q8NI28 CENPUP2-201ENST00000555897 1186 ntBASIC2.85□□□□□ -1.95
LINC01006Q8NI28 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC2.85□□□□□ -1.95
LINC01006Q8NI28 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC2.85□□□□□ -1.95
LINC01006Q8NI28 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC2.85□□□□□ -1.95
LINC01006Q8NI28 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC2.85□□□□□ -1.95
LINC01006Q8NI28 MIR5186-201ENST00000577504 120 ntBASIC2.85□□□□□ -1.95
LINC01006Q8NI28 MIR4999-201ENST00000585029 91 ntBASIC2.85□□□□□ -1.95
LINC01006Q8NI28 AF131215.7-201ENST00000602443 707 ntBASIC2.85□□□□□ -1.95
LINC01006Q8NI28 LLPHP1-201ENST00000603571 367 ntBASIC2.85□□□□□ -1.95
LINC01006Q8NI28 AC069304.2-201ENST00000605154 435 ntBASIC2.85□□□□□ -1.95
LINC01006Q8NI28 AL592221.1-201ENST00000605266 382 ntBASIC2.85□□□□□ -1.95
LINC01006Q8NI28 OR6R2P-201ENST00000609216 300 ntBASIC2.85□□□□□ -1.95
LINC01006Q8NI28 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC2.85□□□□□ -1.95
LINC01006Q8NI28 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC2.85□□□□□ -1.95
LINC01006Q8NI28 MIR3651-201ENST00000630427 90 ntBASIC2.85□□□□□ -1.95
LINC01006Q8NI28 MIR4496-201ENST00000635896 61 ntBASIC2.85□□□□□ -1.95
LINC01006Q8NI28 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC2.85□□□□□ -1.95
LINC01006Q8NI28 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC2.85□□□□□ -1.95
LINC01006Q8NI28 AC012321.1-201ENST00000561622 1588 ntBASIC2.85□□□□□ -1.95
LINC01006Q8NI28 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
LINC01006Q8NI28 ZNF736P9Y-201ENST00000439586 1345 ntBASIC2.85□□□□□ -1.95
LINC01006Q8NI28 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
LINC01006Q8NI28 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
LINC01006Q8NI28 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC2.85□□□□□ -1.95
LINC01006Q8NI28 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC2.85□□□□□ -1.95
LINC01006Q8NI28 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
LINC01006Q8NI28 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
LINC01006Q8NI28 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC2.85□□□□□ -1.95
LINC01006Q8NI28 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC2.84□□□□□ -1.95
LINC01006Q8NI28 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC2.84□□□□□ -1.95
LINC01006Q8NI28 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC2.84□□□□□ -1.95
LINC01006Q8NI28 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
LINC01006Q8NI28 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC2.84□□□□□ -1.95
LINC01006Q8NI28 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC2.84□□□□□ -1.95
LINC01006Q8NI28 SNORD74.4-201ENST00000364129 80 ntBASIC2.84□□□□□ -1.95
LINC01006Q8NI28 RNU1-33P-201ENST00000364249 162 ntBASIC2.84□□□□□ -1.95
LINC01006Q8NI28 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
LINC01006Q8NI28 SNORD116-2-201ENST00000384274 95 ntBASIC2.84□□□□□ -1.95
LINC01006Q8NI28 SNORD116-6-201ENST00000384711 96 ntBASIC2.84□□□□□ -1.95
LINC01006Q8NI28 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC2.84□□□□□ -1.95
LINC01006Q8NI28 HLFP1-201ENST00000402375 499 ntBASIC2.84□□□□□ -1.95
LINC01006Q8NI28 MIR1284-201ENST00000408337 120 ntBASIC2.84□□□□□ -1.95
LINC01006Q8NI28 RNA5SP39-201ENST00000411245 120 ntBASIC2.84□□□□□ -1.95
LINC01006Q8NI28 AC073264.1-201ENST00000411508 416 ntBASIC2.84□□□□□ -1.95
LINC01006Q8NI28 PIGPP2-201ENST00000411569 458 ntBASIC2.84□□□□□ -1.95
LINC01006Q8NI28 Z92545.1-201ENST00000411782 234 ntBASIC2.84□□□□□ -1.95
LINC01006Q8NI28 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC2.84□□□□□ -1.95
LINC01006Q8NI28 AL022400.1-201ENST00000423946 935 ntBASIC2.84□□□□□ -1.95
LINC01006Q8NI28 AC096632.1-201ENST00000427395 310 ntBASIC2.84□□□□□ -1.95
LINC01006Q8NI28 NANOGP6-201ENST00000429190 847 ntBASIC2.84□□□□□ -1.95
LINC01006Q8NI28 ELOCP18-201ENST00000434209 337 ntBASIC2.84□□□□□ -1.95
LINC01006Q8NI28 CYCSP32-201ENST00000440548 321 ntBASIC2.84□□□□□ -1.95
LINC01006Q8NI28 VN1R10P-201ENST00000447106 875 ntBASIC2.84□□□□□ -1.95
LINC01006Q8NI28 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
LINC01006Q8NI28 MTCO3P2-201ENST00000457365 171 ntBASIC2.84□□□□□ -1.95
LINC01006Q8NI28 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC2.84□□□□□ -1.95
LINC01006Q8NI28 LINC00888-204ENST00000487386 421 ntBASIC2.84□□□□□ -1.95
LINC01006Q8NI28 AC025445.1-201ENST00000502728 300 ntBASIC2.84□□□□□ -1.95
LINC01006Q8NI28 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC2.84□□□□□ -1.95
LINC01006Q8NI28 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC2.84□□□□□ -1.95
LINC01006Q8NI28 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC2.84□□□□□ -1.95
LINC01006Q8NI28 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC2.84□□□□□ -1.95
LINC01006Q8NI28 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC2.84□□□□□ -1.95
LINC01006Q8NI28 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC2.84□□□□□ -1.95
LINC01006Q8NI28 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
LINC01006Q8NI28 AC093281.2-201ENST00000510153 597 ntBASIC2.84□□□□□ -1.95
LINC01006Q8NI28 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC2.84□□□□□ -1.95
LINC01006Q8NI28 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC2.84□□□□□ -1.95
LINC01006Q8NI28 SCARNA13-201ENST00000516672 275 ntBASIC2.84□□□□□ -1.95
LINC01006Q8NI28 SNORA70.18-201ENST00000516696 98 ntBASIC2.84□□□□□ -1.95
LINC01006Q8NI28 RN7SKP57-201ENST00000517248 293 ntBASIC2.84□□□□□ -1.95
LINC01006Q8NI28 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC2.84□□□□□ -1.95
LINC01006Q8NI28 OR5AK1P-201ENST00000524837 922 ntBASIC2.84□□□□□ -1.95
LINC01006Q8NI28 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC2.84□□□□□ -1.95
LINC01006Q8NI28 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC2.84□□□□□ -1.95
LINC01006Q8NI28 AC090888.1-201ENST00000561335 1141 ntBASIC2.84□□□□□ -1.95
LINC01006Q8NI28 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC2.84□□□□□ -1.95
LINC01006Q8NI28 AC013444.2-201ENST00000603317 787 ntBASIC2.84□□□□□ -1.95
LINC01006Q8NI28 YWHAQP7-201ENST00000603536 658 ntBASIC2.84□□□□□ -1.95
LINC01006Q8NI28 AC112220.3-201ENST00000605502 502 ntBASIC2.84□□□□□ -1.95
LINC01006Q8NI28 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC2.84□□□□□ -1.95
LINC01006Q8NI28 VIS1.1-201ENST00000610517 203 ntBASIC2.84□□□□□ -1.95
LINC01006Q8NI28 AC093783.1-201ENST00000612976 329 ntBASIC2.84□□□□□ -1.95
LINC01006Q8NI28 MIR8058-201ENST00000615737 89 ntBASIC2.84□□□□□ -1.95
LINC01006Q8NI28 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC2.84□□□□□ -1.95
LINC01006Q8NI28 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC2.84□□□□□ -1.95
LINC01006Q8NI28 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC2.84□□□□□ -1.95
LINC01006Q8NI28 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC2.84□□□□□ -1.95
LINC01006Q8NI28 TEX41-265ENST00000627785 704 ntTSL 5 BASIC2.84□□□□□ -1.95
LINC01006Q8NI28 TEX41-280ENST00000629185 591 ntTSL 5 BASIC2.84□□□□□ -1.95
LINC01006Q8NI28 AC007671.2-201ENST00000637344 619 ntBASIC2.84□□□□□ -1.95
LINC01006Q8NI28 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
LINC01006Q8NI28 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC2.84□□□□□ -1.95
LINC01006Q8NI28 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC2.84□□□□□ -1.95
LINC01006Q8NI28 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
LINC01006Q8NI28 ELL2P4-201ENST00000446870 1376 ntBASIC2.84□□□□□ -1.96
LINC01006Q8NI28 MTND4P34-201ENST00000572715 1371 ntBASIC2.84□□□□□ -1.96
LINC01006Q8NI28 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 100.8 ms